RNA–Protein interactions for RNA: ENST00000444502.5

TOP3B-210, Transcript of DNA topoisomerase III beta, humanhuman

TSL 2

Gene TOP3B, Length 4,163 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-210ENST00000444502 PPP2R2CQ9Y2T4 447 aa11.76□□□□□ -0.53
TOP3B-210ENST00000444502 DAGLAQ9Y4D2 1042 aa11.76□□□□□ -0.53
TOP3B-210ENST00000444502 TCRBV5S4A2TA0A5A2 114 aa11.75□□□□□ -0.53
TOP3B-210ENST00000444502 MORC3Q14149 939 aa11.75□□□□□ -0.53
TOP3B-210ENST00000444502 DNAJC21Q5F1R6 531 aaKnown RBP11.75□□□□□ -0.53
TOP3B-210ENST00000444502 GPATCH4Q5T3I0 446 aaKnown RBP11.75□□□□□ -0.53
TOP3B-210ENST00000444502 DPH6Q7L8W6 267 aa11.75□□□□□ -0.53
TOP3B-210ENST00000444502 NEK8Q86SG6 692 aa11.75□□□□□ -0.53
TOP3B-210ENST00000444502 ACBD3Q9H3P7 528 aa11.75□□□□□ -0.53
TOP3B-210ENST00000444502 USP17L5A8MUK1 530 aa11.75□□□□□ -0.53
TOP3B-210ENST00000444502 RPN1P04843 607 aaKnown RBP11.75□□□□□ -0.53
TOP3B-210ENST00000444502 ARHGEF16Q5VV41 709 aa11.75□□□□□ -0.53
TOP3B-210ENST00000444502 TRIML1Q8N9V2 468 aa11.75□□□□□ -0.53
TOP3B-210ENST00000444502 GLG1Q92896 1179 aa11.75□□□□□ -0.53
TOP3B-210ENST00000444502 YY1AP1Q9H869 796 aa11.75□□□□□ -0.53
TOP3B-210ENST00000444502 PCDHA4Q9UN74 947 aa11.75□□□□□ -0.53
TOP3B-210ENST00000444502 RGPD1P0DJD0 1748 aa11.75□□□□□ -0.53
TOP3B-210ENST00000444502 GTPBP6O43824 516 aaPredicted RBP11.75□□□□□ -0.53
TOP3B-210ENST00000444502 USO1O60763 962 aaKnown RBP11.75□□□□□ -0.53
TOP3B-210ENST00000444502 HAUS3Q68CZ6 603 aa11.75□□□□□ -0.53
TOP3B-210ENST00000444502 PPM1EQ8WY54 764 aa11.75□□□□□ -0.53
TOP3B-210ENST00000444502 CXorf56Q9H5V9 222 aa11.75□□□□□ -0.53
TOP3B-210ENST00000444502 MED1Q15648 1581 aaPredicted RBP11.75□□□□□ -0.53
TOP3B-210ENST00000444502 RGPD2P0DJD1 1756 aa11.75□□□□□ -0.53
TOP3B-210ENST00000444502 FAM208AQ9UK61 1670 aaKnown RBP11.75□□□□□ -0.53
TOP3B-210ENST00000444502 CTAGE9A4FU28 777 aa11.75□□□□□ -0.53
TOP3B-210ENST00000444502 KCNJ18B7U540 433 aa11.75□□□□□ -0.53
TOP3B-210ENST00000444502 GCOM1H8Y6P7 765 aaPredicted RBP11.75□□□□□ -0.53
TOP3B-210ENST00000444502 TULP2O00295 520 aa11.75□□□□□ -0.53
TOP3B-210ENST00000444502 NEBLO76041 1014 aa11.75□□□□□ -0.53
TOP3B-210ENST00000444502 POLR2MP0CAP2 368 aa11.75□□□□□ -0.53
TOP3B-210ENST00000444502 GUCY2CP25092 1073 aa11.75□□□□□ -0.53
TOP3B-210ENST00000444502 CASP14P31944 242 aa11.75□□□□□ -0.53
TOP3B-210ENST00000444502 CYLC1P35663 651 aaPredicted RBP11.75□□□□□ -0.53
TOP3B-210ENST00000444502 NOP2P46087 812 aaKnown RBP11.75□□□□□ -0.53
TOP3B-210ENST00000444502 SPP2Q13103 211 aa11.75□□□□□ -0.53
TOP3B-210ENST00000444502 KCNJ12Q14500 433 aa11.75□□□□□ -0.53
TOP3B-210ENST00000444502 CCDC42Q96M95 316 aa11.75□□□□□ -0.53
TOP3B-210ENST00000444502 POLLQ9UGP5 575 aa11.75□□□□□ -0.53
TOP3B-210ENST00000444502 ZHX2Q9Y6X8 837 aa11.75□□□□□ -0.53
TOP3B-210ENST00000444502 PP2D1A8MPX8 630 aa11.74□□□□□ -0.53
TOP3B-210ENST00000444502 KRT13P13646 458 aa11.74□□□□□ -0.53
TOP3B-210ENST00000444502 NTRK3Q16288 839 aa11.74□□□□□ -0.53
TOP3B-210ENST00000444502 NLRX1Q86UT6 975 aa11.74□□□□□ -0.53
TOP3B-210ENST00000444502 VPS36Q86VN1 386 aa11.74□□□□□ -0.53
TOP3B-210ENST00000444502 FOXP4Q8IVH2 680 aaPredicted RBP11.74□□□□□ -0.53
TOP3B-210ENST00000444502 CCDC65Q8IXS2 484 aa11.74□□□□□ -0.53
TOP3B-210ENST00000444502 TTC16Q8NEE8 873 aa11.74□□□□□ -0.53
TOP3B-210ENST00000444502 ENOX1Q8TC92 643 aaKnown RBP11.74□□□□□ -0.53
TOP3B-210ENST00000444502 GSDMAQ96QA5 445 aa11.74□□□□□ -0.53
TOP3B-210ENST00000444502 NBPF3Q9H094 633 aa11.74□□□□□ -0.53
TOP3B-210ENST00000444502 GLT8D2Q9H1C3 349 aa11.74□□□□□ -0.53
TOP3B-210ENST00000444502 SLC39A2Q9NP94 309 aa11.74□□□□□ -0.53
TOP3B-210ENST00000444502 FBXO2Q9UK22 296 aaPredicted RBP11.74□□□□□ -0.53
TOP3B-210ENST00000444502 SUFUQ9UMX1 484 aa11.74□□□□□ -0.53
TOP3B-210ENST00000444502 GDAQ9Y2T3 454 aa11.74□□□□□ -0.53
TOP3B-210ENST00000444502 TNS2Q63HR2 1409 aa11.74□□□□□ -0.53
TOP3B-210ENST00000444502 OR52Z1P0C646 297 aa11.74□□□□□ -0.53
TOP3B-210ENST00000444502 AKR1B1P15121 316 aa11.74□□□□□ -0.53
TOP3B-210ENST00000444502 SARNPP82979 210 aaKnown RBP11.74□□□□□ -0.53
TOP3B-210ENST00000444502 VSTM4Q8IW00 320 aa11.74□□□□□ -0.53
TOP3B-210ENST00000444502 SLC24A3Q9HC58 644 aa11.74□□□□□ -0.53
TOP3B-210ENST00000444502 BICDL2A1A5D9 508 aa11.74□□□□□ -0.53
TOP3B-210ENST00000444502 PPP2R3AQ06190 1150 aa11.74□□□□□ -0.53
TOP3B-210ENST00000444502 CUL4BQ13620 913 aa11.74□□□□□ -0.53
TOP3B-210ENST00000444502 CCDC122Q5T0U0 273 aa11.74□□□□□ -0.53
TOP3B-210ENST00000444502 SAMD7Q7Z3H4 446 aa11.74□□□□□ -0.53
TOP3B-210ENST00000444502 MICALL2Q8IY33 904 aa11.74□□□□□ -0.53
TOP3B-210ENST00000444502 RDH13Q8NBN7 331 aa11.74□□□□□ -0.53
TOP3B-210ENST00000444502 ZNRF3Q9ULT6 936 aa11.74□□□□□ -0.53
TOP3B-210ENST00000444502 STAT2P52630 851 aa11.73□□□□□ -0.53
TOP3B-210ENST00000444502 BIRC2Q13490 618 aa11.73□□□□□ -0.53
TOP3B-210ENST00000444502 ASPRV1Q53RT3 343 aa11.73□□□□□ -0.53
TOP3B-210ENST00000444502 GBP6Q6ZN66 633 aa11.73□□□□□ -0.53
TOP3B-210ENST00000444502 FBXO33Q7Z6M2 555 aa11.73□□□□□ -0.53
TOP3B-210ENST00000444502 DGKHQ86XP1 1220 aa11.73□□□□□ -0.53
TOP3B-210ENST00000444502 TBCKQ8TEA7 893 aa11.73□□□□□ -0.53
TOP3B-210ENST00000444502 DNM3Q9UQ16 869 aa11.73□□□□□ -0.53
TOP3B-210ENST00000444502 MRPL11Q9Y3B7 192 aaKnown RBP11.73□□□□□ -0.53
TOP3B-210ENST00000444502 CHD2O14647 1828 aaKnown RBP11.73□□□□□ -0.53
TOP3B-210ENST00000444502 ASNSP08243 561 aa11.73□□□□□ -0.53
TOP3B-210ENST00000444502 ARMCX5Q6P1M9 558 aa11.73□□□□□ -0.53
TOP3B-210ENST00000444502 CNOT7Q9UIV1 285 aaKnown RBP11.73□□□□□ -0.53
TOP3B-210ENST00000444502 CTAGE15A4D2H0 777 aa11.73□□□□□ -0.53
TOP3B-210ENST00000444502 CTAGE8P0CG41 777 aa11.73□□□□□ -0.53
TOP3B-210ENST00000444502 EEF2P13639 858 aaKnown RBP11.73□□□□□ -0.53
TOP3B-210ENST00000444502 ERCC5P28715 1186 aaPredicted RBP11.73□□□□□ -0.53
TOP3B-210ENST00000444502 CNGA1P29973 690 aa11.73□□□□□ -0.53
TOP3B-210ENST00000444502 LIG3P49916 1009 aa11.73□□□□□ -0.53
TOP3B-210ENST00000444502 RBL2Q08999 1139 aa11.73□□□□□ -0.53
TOP3B-210ENST00000444502 PTPAQ15257 358 aa11.73□□□□□ -0.53
TOP3B-210ENST00000444502 CTAGE6Q86UF2 777 aa11.73□□□□□ -0.53
TOP3B-210ENST00000444502 CTAGE4Q8IX94 777 aa11.73□□□□□ -0.53
TOP3B-210ENST00000444502 EPC1Q9H2F5 836 aa11.73□□□□□ -0.53
TOP3B-210ENST00000444502 FAM217BQ9NTX9 383 aaPredicted RBP11.73□□□□□ -0.53
TOP3B-210ENST00000444502 NOD1Q9Y239 953 aa11.73□□□□□ -0.53
TOP3B-210ENST00000444502 EIF3JO75822 258 aaKnown RBP11.72□□□□□ -0.53
TOP3B-210ENST00000444502 LONP1P36776 959 aaKnown RBP11.72□□□□□ -0.53
TOP3B-210ENST00000444502 RASA3Q14644 834 aa11.72□□□□□ -0.53
TOP3B-210ENST00000444502 PFKFB3Q16875 520 aaPredicted RBP11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 86.4 ms