RNA–Protein interactions for RNA: ENST00000444440.1

SF3A1-203, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 5

Gene SF3A1, Length 777 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-203ENST00000444440 TSEN34Q9BSV6 310 aaKnown RBP12.72□□□□□ -0.37
SF3A1-203ENST00000444440 UBE2OQ9C0C9 1292 aaKnown RBP12.72□□□□□ -0.37
SF3A1-203ENST00000444440 PRDM5Q9NQX1 630 aaPredicted RBP12.72□□□□□ -0.37
SF3A1-203ENST00000444440 MAD2L2Q9UI95 211 aa12.72□□□□□ -0.37
SF3A1-203ENST00000444440 U3KPZ7 1027 aaPredicted RBP12.72□□□□□ -0.37
SF3A1-203ENST00000444440 PTPRSQ13332 1948 aa12.71□□□□□ -0.37
SF3A1-203ENST00000444440 OPLAHO14841 1288 aa12.71□□□□□ -0.37
SF3A1-203ENST00000444440 PQBP1O60828 265 aaKnown RBP12.71□□□□□ -0.37
SF3A1-203ENST00000444440 PARP1P09874 1014 aaKnown RBP12.71□□□□□ -0.37
SF3A1-203ENST00000444440 NT5C2P49902 561 aa12.71□□□□□ -0.37
SF3A1-203ENST00000444440 NKX3-2P78367 333 aa12.71□□□□□ -0.37
SF3A1-203ENST00000444440 RNF207Q6ZRF8 634 aa12.71□□□□□ -0.37
SF3A1-203ENST00000444440 TLK2Q86UE8 772 aa12.71□□□□□ -0.37
SF3A1-203ENST00000444440 BADQ92934 168 aa12.71□□□□□ -0.37
SF3A1-203ENST00000444440 ESYT1Q9BSJ8 1104 aa12.71□□□□□ -0.37
SF3A1-203ENST00000444440 VAT1LQ9HCJ6 419 aa12.71□□□□□ -0.37
SF3A1-203ENST00000444440 STARD7Q9NQZ5 370 aa12.71□□□□□ -0.37
SF3A1-203ENST00000444440 PALM3A6NDB9 673 aaPredicted RBP12.7□□□□□ -0.38
SF3A1-203ENST00000444440 MOXD2PA6NHM9 499 aa12.7□□□□□ -0.38
SF3A1-203ENST00000444440 EDNRBP24530 442 aa12.7□□□□□ -0.38
SF3A1-203ENST00000444440 FAAP100Q0VG06 881 aa12.7□□□□□ -0.38
SF3A1-203ENST00000444440 GNASQ5JWF2 1037 aa12.7□□□□□ -0.38
SF3A1-203ENST00000444440 C9orf50Q5SZB4 431 aa12.7□□□□□ -0.38
SF3A1-203ENST00000444440 CENPQQ7L2Z9 268 aaPredicted RBP12.7□□□□□ -0.38
SF3A1-203ENST00000444440 MTMR8Q96EF0 704 aa12.7□□□□□ -0.38
SF3A1-203ENST00000444440 GRIN2DO15399 1336 aa12.69□□□□□ -0.38
SF3A1-203ENST00000444440 KLRF2D3W0D1 207 aa12.69□□□□□ -0.38
SF3A1-203ENST00000444440 IFIT3O14879 490 aaKnown RBP12.69□□□□□ -0.38
SF3A1-203ENST00000444440 DYNC1LI2O43237 492 aaPredicted RBP12.69□□□□□ -0.38
SF3A1-203ENST00000444440 CYTH3O43739 400 aa12.69□□□□□ -0.38
SF3A1-203ENST00000444440 CLTBP09497 229 aa12.69□□□□□ -0.38
SF3A1-203ENST00000444440 CDK7P50613 346 aa12.69□□□□□ -0.38
SF3A1-203ENST00000444440 EPHB4P54760 987 aa12.69□□□□□ -0.38
SF3A1-203ENST00000444440 TROAPQ12815 778 aa12.69□□□□□ -0.38
SF3A1-203ENST00000444440 GRM4Q14833 912 aa12.69□□□□□ -0.38
SF3A1-203ENST00000444440 CXCL17Q6UXB2 119 aa12.69□□□□□ -0.38
SF3A1-203ENST00000444440 KIAA1211Q6ZU35 1233 aa12.69□□□□□ -0.38
SF3A1-203ENST00000444440 ANKRD33Q7Z3H0 272 aa12.69□□□□□ -0.38
SF3A1-203ENST00000444440 NCOA7Q8NI08 942 aa12.69□□□□□ -0.38
SF3A1-203ENST00000444440 IGDCC4Q8TDY8 1250 aa12.69□□□□□ -0.38
SF3A1-203ENST00000444440 COPS5Q92905 334 aa12.69□□□□□ -0.38
SF3A1-203ENST00000444440 TAAR1Q96RJ0 339 aa12.69□□□□□ -0.38
SF3A1-203ENST00000444440 VTA1Q9NP79 307 aa12.69□□□□□ -0.38
SF3A1-203ENST00000444440 UNC80Q8N2C7 3258 aa12.68□□□□□ -0.38
SF3A1-203ENST00000444440 ABCB11O95342 1321 aa12.68□□□□□ -0.38
SF3A1-203ENST00000444440 RBM47A0AV96 593 aaKnown RBP12.68□□□□□ -0.38
SF3A1-203ENST00000444440 SLC27A2O14975 620 aa12.68□□□□□ -0.38
SF3A1-203ENST00000444440 KIAA0355O15063 1070 aa12.68□□□□□ -0.38
SF3A1-203ENST00000444440 ARIH2O95376 493 aa12.68□□□□□ -0.38
SF3A1-203ENST00000444440 NEFLP07196 543 aa12.68□□□□□ -0.38
SF3A1-203ENST00000444440 TRDNQ13061 729 aa12.68□□□□□ -0.38
SF3A1-203ENST00000444440 NECTIN1Q15223 517 aa12.68□□□□□ -0.38
SF3A1-203ENST00000444440 SHHQ15465 462 aa12.68□□□□□ -0.38
SF3A1-203ENST00000444440 FSCN1Q16658 493 aaKnown RBP12.68□□□□□ -0.38
SF3A1-203ENST00000444440 LRIT3Q3SXY7 679 aa12.68□□□□□ -0.38
SF3A1-203ENST00000444440 BMP2KLQ5H9B9 411 aa12.68□□□□□ -0.38
SF3A1-203ENST00000444440 NOL8Q76FK4 1167 aaKnown RBP12.68□□□□□ -0.38
SF3A1-203ENST00000444440 FBXO11Q86XK2 927 aa12.68□□□□□ -0.38
SF3A1-203ENST00000444440 PCSK9Q8NBP7 692 aaKnown RBP12.68□□□□□ -0.38
SF3A1-203ENST00000444440 SYTL5Q8TDW5 730 aaPredicted RBP12.68□□□□□ -0.38
SF3A1-203ENST00000444440 NUP133Q8WUM0 1156 aa12.68□□□□□ -0.38
SF3A1-203ENST00000444440 MYL10Q9BUA6 226 aa12.68□□□□□ -0.38
SF3A1-203ENST00000444440 LY9Q9HBG7 655 aa12.68□□□□□ -0.38
SF3A1-203ENST00000444440 ADD3Q9UEY8 706 aaKnown RBP12.68□□□□□ -0.38
SF3A1-203ENST00000444440 PRKAG2Q9UGJ0 569 aa12.68□□□□□ -0.38
SF3A1-203ENST00000444440 TET1Q8NFU7 2136 aa12.68□□□□□ -0.38
SF3A1-203ENST00000444440 PRUNE2Q8WUY3 3088 aa12.68□□□□□ -0.38
SF3A1-203ENST00000444440 ELP1O95163 1332 aa12.67□□□□□ -0.38
SF3A1-203ENST00000444440 ARVCFO00192 962 aa12.67□□□□□ -0.38
SF3A1-203ENST00000444440 DHX16O60231 1041 aaKnown RBP12.67□□□□□ -0.38
SF3A1-203ENST00000444440 PSMC6P62333 389 aa12.67□□□□□ -0.38
SF3A1-203ENST00000444440 WTAPQ15007 396 aa12.67□□□□□ -0.38
SF3A1-203ENST00000444440 DUSP28Q4G0W2 176 aa12.67□□□□□ -0.38
SF3A1-203ENST00000444440 TMEM67Q5HYA8 995 aa12.67□□□□□ -0.38
SF3A1-203ENST00000444440 IQSEC1Q6DN90 963 aa12.67□□□□□ -0.38
SF3A1-203ENST00000444440 Q7L0L9 218 aa12.67□□□□□ -0.38
SF3A1-203ENST00000444440 RALYLQ86SE5 291 aaKnown RBP12.67□□□□□ -0.38
SF3A1-203ENST00000444440 FAM126BQ8IXS8 530 aa12.67□□□□□ -0.38
SF3A1-203ENST00000444440 RGS22Q8NE09 1264 aa12.67□□□□□ -0.38
SF3A1-203ENST00000444440 DNERQ8NFT8 737 aa12.67□□□□□ -0.38
SF3A1-203ENST00000444440 PPP1R13LQ8WUF5 828 aa12.67□□□□□ -0.38
SF3A1-203ENST00000444440 GLT1D1Q96MS3 346 aa12.67□□□□□ -0.38
SF3A1-203ENST00000444440 PIGSQ96S52 555 aa12.67□□□□□ -0.38
SF3A1-203ENST00000444440 LBHD1Q9BQE6 289 aaPredicted RBP12.67□□□□□ -0.38
SF3A1-203ENST00000444440 WDR11Q9BZH6 1224 aa12.67□□□□□ -0.38
SF3A1-203ENST00000444440 TBX21Q9UL17 535 aa12.67□□□□□ -0.38
SF3A1-203ENST00000444440 WDR81Q562E7 1941 aa12.66□□□□□ -0.38
SF3A1-203ENST00000444440 LOC102724159A0A0B4J2E5 919 aa12.66□□□□□ -0.38
SF3A1-203ENST00000444440 A0A0U1RQG5 324 aaPredicted RBP12.66□□□□□ -0.38
SF3A1-203ENST00000444440 RBAK-RBAKDNI3L0D1 243 aa12.66□□□□□ -0.38
SF3A1-203ENST00000444440 CENPBP07199 599 aaPredicted RBP12.66□□□□□ -0.38
SF3A1-203ENST00000444440 PDE4DQ08499 809 aa12.66□□□□□ -0.38
SF3A1-203ENST00000444440 PWP2Q15269 919 aaKnown RBP12.66□□□□□ -0.38
SF3A1-203ENST00000444440 CREB3L3Q68CJ9 461 aa12.66□□□□□ -0.38
SF3A1-203ENST00000444440 HOMER1Q86YM7 354 aa12.66□□□□□ -0.38
SF3A1-203ENST00000444440 SLC43A3Q8NBI5 491 aa12.66□□□□□ -0.38
SF3A1-203ENST00000444440 TOX2Q96NM4 488 aa12.66□□□□□ -0.38
SF3A1-203ENST00000444440 LRRC2Q9BYS8 371 aa12.66□□□□□ -0.38
SF3A1-203ENST00000444440 RIOX1Q9H6W3 641 aa12.66□□□□□ -0.38
SF3A1-203ENST00000444440 SPC25Q9HBM1 224 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms