RNA–Protein interactions for RNA: ENST00000443727.1

LRCH3-208, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 4

Gene LRCH3, Length 611 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-208ENST00000443727 ESYT1Q9BSJ8 1104 aa23.4■■□□□ 1.34
LRCH3-208ENST00000443727 JMJD4Q9H9V9 463 aa23.4■■□□□ 1.34
LRCH3-208ENST00000443727 DCDC2CA8MYV0 355 aa23.39■■□□□ 1.33
LRCH3-208ENST00000443727 DYNC1LI2O43237 492 aaPredicted RBP23.39■■□□□ 1.33
LRCH3-208ENST00000443727 SMPD1P17405 629 aa23.39■■□□□ 1.33
LRCH3-208ENST00000443727 BEX3Q00994 111 aa23.39■■□□□ 1.33
LRCH3-208ENST00000443727 BMP2KLQ5H9B9 411 aa23.39■■□□□ 1.33
LRCH3-208ENST00000443727 TAPT1Q6NXT6 567 aa23.39■■□□□ 1.33
LRCH3-208ENST00000443727 STOX1Q6ZVD7 989 aa23.39■■□□□ 1.33
LRCH3-208ENST00000443727 STAG2Q8N3U4 1231 aa23.39■■□□□ 1.33
LRCH3-208ENST00000443727 RGS22Q8NE09 1264 aa23.39■■□□□ 1.33
LRCH3-208ENST00000443727 PDLIM7Q9NR12 457 aa23.39■■□□□ 1.33
LRCH3-208ENST00000443727 MRPL11Q9Y3B7 192 aaKnown RBP23.39■■□□□ 1.33
LRCH3-208ENST00000443727 ELP1O95163 1332 aa23.38■■□□□ 1.33
LRCH3-208ENST00000443727 CLTBP09497 229 aa23.38■■□□□ 1.33
LRCH3-208ENST00000443727 CATIPQ7Z7H3 387 aa23.38■■□□□ 1.33
LRCH3-208ENST00000443727 MCF2L2Q86YR7 1114 aa23.38■■□□□ 1.33
LRCH3-208ENST00000443727 DNERQ8NFT8 737 aa23.38■■□□□ 1.33
LRCH3-208ENST00000443727 ANO2Q9NQ90 1003 aa23.38■■□□□ 1.33
LRCH3-208ENST00000443727 GNEQ9Y223 722 aaKnown RBP23.38■■□□□ 1.33
LRCH3-208ENST00000443727 ZEB2O60315 1214 aa23.37■■□□□ 1.33
LRCH3-208ENST00000443727 FSCN1Q16658 493 aaKnown RBP23.37■■□□□ 1.33
LRCH3-208ENST00000443727 SH3RF1Q7Z6J0 888 aa23.37■■□□□ 1.33
LRCH3-208ENST00000443727 CCDC136Q96JN2 1154 aa23.37■■□□□ 1.33
LRCH3-208ENST00000443727 AMNQ9BXJ7 453 aa23.37■■□□□ 1.33
LRCH3-208ENST00000443727 LSG1Q9H089 658 aaKnown RBP23.37■■□□□ 1.33
LRCH3-208ENST00000443727 TMEM39AQ9NV64 488 aa23.37■■□□□ 1.33
LRCH3-208ENST00000443727 MAD2L2Q9UI95 211 aa23.37■■□□□ 1.33
LRCH3-208ENST00000443727 A0A0U1RQG5 324 aaPredicted RBP23.36■■□□□ 1.33
LRCH3-208ENST00000443727 TRIM43BA6NCK2 446 aa23.36■■□□□ 1.33
LRCH3-208ENST00000443727 PALM3A6NDB9 673 aaPredicted RBP23.36■■□□□ 1.33
LRCH3-208ENST00000443727 SOX1O00570 391 aaPredicted RBP23.36■■□□□ 1.33
LRCH3-208ENST00000443727 GRM4Q14833 912 aa23.36■■□□□ 1.33
LRCH3-208ENST00000443727 CASC1Q6TDU7 716 aa23.36■■□□□ 1.33
LRCH3-208ENST00000443727 BADQ92934 168 aa23.36■■□□□ 1.33
LRCH3-208ENST00000443727 TRIM43Q96BQ3 446 aaPredicted RBP23.36■■□□□ 1.33
LRCH3-208ENST00000443727 WDR11Q9BZH6 1224 aa23.36■■□□□ 1.33
LRCH3-208ENST00000443727 MAF1Q9H063 256 aa23.36■■□□□ 1.33
LRCH3-208ENST00000443727 SENP2Q9HC62 589 aa23.36■■□□□ 1.33
LRCH3-208ENST00000443727 Q9Y3F1 56 aa23.36■■□□□ 1.33
LRCH3-208ENST00000443727 MROH7Q68CQ1 1323 aa23.35■■□□□ 1.33
LRCH3-208ENST00000443727 CTAGE5O15320 804 aa23.35■■□□□ 1.33
LRCH3-208ENST00000443727 DUSP28Q4G0W2 176 aa23.35■■□□□ 1.33
LRCH3-208ENST00000443727 ANKRD33Q7Z3H0 272 aa23.35■■□□□ 1.33
LRCH3-208ENST00000443727 MB21D2Q8IYB1 491 aaPredicted RBP23.35■■□□□ 1.33
LRCH3-208ENST00000443727 TOX2Q96NM4 488 aa23.35■■□□□ 1.33
LRCH3-208ENST00000443727 ZBTB5O15062 677 aa23.34■■□□□ 1.33
LRCH3-208ENST00000443727 CABYRO75952 493 aa23.34■■□□□ 1.33
LRCH3-208ENST00000443727 RAG1P15918 1043 aa23.34■■□□□ 1.33
LRCH3-208ENST00000443727 PTGS1P23219 599 aa23.34■■□□□ 1.33
LRCH3-208ENST00000443727 ANTXR2P58335 489 aa23.34■■□□□ 1.33
LRCH3-208ENST00000443727 NKX3-2P78367 333 aa23.34■■□□□ 1.33
LRCH3-208ENST00000443727 CXCL17Q6UXB2 119 aa23.34■■□□□ 1.33
LRCH3-208ENST00000443727 HOMER1Q86YM7 354 aa23.34■■□□□ 1.33
LRCH3-208ENST00000443727 TBC1D5Q92609 795 aa23.34■■□□□ 1.33
LRCH3-208ENST00000443727 LRCH3Q96II8 777 aa23.34■■□□□ 1.33
LRCH3-208ENST00000443727 LCTP09848 1927 aa23.33■■□□□ 1.33
LRCH3-208ENST00000443727 SLC27A2O14975 620 aa23.33■■□□□ 1.33
LRCH3-208ENST00000443727 PRC1O43663 620 aa23.33■■□□□ 1.33
LRCH3-208ENST00000443727 CFBP00751 764 aa23.33■■□□□ 1.33
LRCH3-208ENST00000443727 MCM5P33992 734 aa23.33■■□□□ 1.33
LRCH3-208ENST00000443727 TRAF1Q13077 416 aa23.33■■□□□ 1.33
LRCH3-208ENST00000443727 LRIT3Q3SXY7 679 aa23.33■■□□□ 1.33
LRCH3-208ENST00000443727 TMEM63BQ5T3F8 832 aa23.33■■□□□ 1.33
LRCH3-208ENST00000443727 NFXL1Q6ZNB6 911 aa23.33■■□□□ 1.33
LRCH3-208ENST00000443727 SYTL5Q8TDW5 730 aaPredicted RBP23.33■■□□□ 1.33
LRCH3-208ENST00000443727 IGDCC4Q8TDY8 1250 aa23.33■■□□□ 1.33
LRCH3-208ENST00000443727 NSUN6Q8TEA1 469 aaKnown RBP23.33■■□□□ 1.33
LRCH3-208ENST00000443727 PCDHA1Q9Y5I3 950 aa23.33■■□□□ 1.33
LRCH3-208ENST00000443727 LRRC37A2A6NM11 1700 aa23.33■■□□□ 1.32
LRCH3-208ENST00000443727 ARVCFO00192 962 aa23.32■■□□□ 1.32
LRCH3-208ENST00000443727 KIAA0355O15063 1070 aa23.32■■□□□ 1.32
LRCH3-208ENST00000443727 EDNRBP24530 442 aa23.32■■□□□ 1.32
LRCH3-208ENST00000443727 FAAP100Q0VG06 881 aa23.32■■□□□ 1.32
LRCH3-208ENST00000443727 TROAPQ12815 778 aa23.32■■□□□ 1.32
LRCH3-208ENST00000443727 PPP2R5BQ15173 497 aa23.32■■□□□ 1.32
LRCH3-208ENST00000443727 CREB3L3Q68CJ9 461 aa23.32■■□□□ 1.32
LRCH3-208ENST00000443727 SCFD2Q8WU76 684 aa23.32■■□□□ 1.32
LRCH3-208ENST00000443727 TAAR1Q96RJ0 339 aa23.32■■□□□ 1.32
LRCH3-208ENST00000443727 RMDN3Q96TC7 470 aa23.32■■□□□ 1.32
LRCH3-208ENST00000443727 RBM47A0AV96 593 aaKnown RBP23.31■■□□□ 1.32
LRCH3-208ENST00000443727 TLR3O15455 904 aaKnown RBP23.31■■□□□ 1.32
LRCH3-208ENST00000443727 BRDTQ58F21 947 aaPredicted RBP23.31■■□□□ 1.32
LRCH3-208ENST00000443727 RNF20Q5VTR2 975 aa23.31■■□□□ 1.32
LRCH3-208ENST00000443727 ARHGEF16Q5VV41 709 aa23.31■■□□□ 1.32
LRCH3-208ENST00000443727 OR6J1Q8NGC5 347 aa23.31■■□□□ 1.32
LRCH3-208ENST00000443727 CTCFLQ8NI51 663 aaPredicted RBP23.31■■□□□ 1.32
LRCH3-208ENST00000443727 MTMR8Q96EF0 704 aa23.31■■□□□ 1.32
LRCH3-208ENST00000443727 PIGSQ96S52 555 aa23.31■■□□□ 1.32
LRCH3-208ENST00000443727 CDC45O75419 566 aa23.3■■□□□ 1.32
LRCH3-208ENST00000443727 NEFLP07196 543 aa23.3■■□□□ 1.32
LRCH3-208ENST00000443727 CPT1AP50416 773 aa23.3■■□□□ 1.32
LRCH3-208ENST00000443727 CDK7P50613 346 aa23.3■■□□□ 1.32
LRCH3-208ENST00000443727 TTLL4Q14679 1199 aa23.3■■□□□ 1.32
LRCH3-208ENST00000443727 ZNF654Q8IZM8 581 aa23.3■■□□□ 1.32
LRCH3-208ENST00000443727 TMTC2Q8N394 836 aa23.3■■□□□ 1.32
LRCH3-208ENST00000443727 MTA3Q9BTC8 594 aa23.3■■□□□ 1.32
LRCH3-208ENST00000443727 LY9Q9HBG7 655 aa23.3■■□□□ 1.32
LRCH3-208ENST00000443727 COL20A1Q9P218 1284 aa23.3■■□□□ 1.32
LRCH3-208ENST00000443727 CCDC69A6NI79 296 aa23.29■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms