RNA–Protein interactions for RNA: ENST00000443197.5

CALD1-210, Transcript of caldesmon 1, humanhuman

TSL 5

Gene CALD1, Length 4,173 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-210ENST00000443197 HPS3Q969F9 1004 aa11.8□□□□□ -0.52
CALD1-210ENST00000443197 RUFY1Q96T51 708 aa11.8□□□□□ -0.52
CALD1-210ENST00000443197 B4DLN1 442 aa11.79□□□□□ -0.52
CALD1-210ENST00000443197 CETN3O15182 167 aa11.79□□□□□ -0.52
CALD1-210ENST00000443197 AP5Z1O43299 807 aa11.79□□□□□ -0.52
CALD1-210ENST00000443197 TMED8Q6PL24 325 aaPredicted RBP11.79□□□□□ -0.52
CALD1-210ENST00000443197 VPS36Q86VN1 386 aa11.79□□□□□ -0.52
CALD1-210ENST00000443197 TAF4BQ92750 862 aa11.79□□□□□ -0.52
CALD1-210ENST00000443197 DISP2A7MBM2 1401 aa11.79□□□□□ -0.52
CALD1-210ENST00000443197 KIF5AQ12840 1032 aa11.79□□□□□ -0.52
CALD1-210ENST00000443197 EAPPQ56P03 285 aaPredicted RBP11.79□□□□□ -0.52
CALD1-210ENST00000443197 FAM26FQ5R3K3 315 aa11.79□□□□□ -0.52
CALD1-210ENST00000443197 MYOCDQ8IZQ8 938 aa11.79□□□□□ -0.52
CALD1-210ENST00000443197 TCHPQ9BT92 498 aa11.79□□□□□ -0.52
CALD1-210ENST00000443197 DDX4Q9NQI0 724 aaKnown RBP11.79□□□□□ -0.52
CALD1-210ENST00000443197 MRPL11Q9Y3B7 192 aaKnown RBP11.79□□□□□ -0.52
CALD1-210ENST00000443197 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.79□□□□□ -0.52
CALD1-210ENST00000443197 PSMD14O00487 310 aa11.79□□□□□ -0.52
CALD1-210ENST00000443197 LAD1O00515 517 aa11.79□□□□□ -0.52
CALD1-210ENST00000443197 SSR1P43307 286 aaKnown RBP11.79□□□□□ -0.52
CALD1-210ENST00000443197 CETN1Q12798 172 aa11.79□□□□□ -0.52
CALD1-210ENST00000443197 PAGR1Q9BTK6 254 aa11.79□□□□□ -0.52
CALD1-210ENST00000443197 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.79□□□□□ -0.52
CALD1-210ENST00000443197 KDM3BQ7LBC6 1761 aa11.79□□□□□ -0.52
CALD1-210ENST00000443197 DDTLA6NHG4 134 aaPredicted RBP11.79□□□□□ -0.52
CALD1-210ENST00000443197 IL1R1P14778 569 aa11.79□□□□□ -0.52
CALD1-210ENST00000443197 COPB1P53618 953 aaKnown RBP11.79□□□□□ -0.52
CALD1-210ENST00000443197 ZNF543Q08ER8 600 aa11.79□□□□□ -0.52
CALD1-210ENST00000443197 ZNF658Q5TYW1 1059 aaPredicted RBP11.79□□□□□ -0.52
CALD1-210ENST00000443197 HHIPL2Q6UWX4 724 aa11.79□□□□□ -0.52
CALD1-210ENST00000443197 ZFPM1Q8IX07 1006 aa11.79□□□□□ -0.52
CALD1-210ENST00000443197 PSMB7Q99436 277 aa11.79□□□□□ -0.52
CALD1-210ENST00000443197 TMEM39BQ9GZU3 492 aa11.79□□□□□ -0.52
CALD1-210ENST00000443197 PARP4Q9UKK3 1724 aaKnown RBP11.78□□□□□ -0.52
CALD1-210ENST00000443197 STXBP3O00186 592 aa11.78□□□□□ -0.52
CALD1-210ENST00000443197 NF2P35240 595 aa11.78□□□□□ -0.52
CALD1-210ENST00000443197 LRCH2Q5VUJ6 765 aa11.78□□□□□ -0.52
CALD1-210ENST00000443197 AK8Q96MA6 479 aa11.78□□□□□ -0.52
CALD1-210ENST00000443197 MAP3K14Q99558 947 aa11.78□□□□□ -0.52
CALD1-210ENST00000443197 CARD6Q9BX69 1037 aa11.78□□□□□ -0.52
CALD1-210ENST00000443197 TACC3Q9Y6A5 838 aa11.78□□□□□ -0.52
CALD1-210ENST00000443197 SFI1A8K8P3 1242 aa11.78□□□□□ -0.52
CALD1-210ENST00000443197 RRP9O43818 475 aaKnown RBP11.78□□□□□ -0.52
CALD1-210ENST00000443197 HARSP12081 509 aaKnown RBP11.78□□□□□ -0.52
CALD1-210ENST00000443197 KRT13P13646 458 aa11.78□□□□□ -0.52
CALD1-210ENST00000443197 STAT3P40763 770 aa11.78□□□□□ -0.52
CALD1-210ENST00000443197 PRCPP42785 496 aa11.78□□□□□ -0.52
CALD1-210ENST00000443197 FMR1Q06787 632 aaKnown RBP eCLIP11.78□□□□□ -0.52
CALD1-210ENST00000443197 RBL2Q08999 1139 aa11.78□□□□□ -0.52
CALD1-210ENST00000443197 RRAGAQ7L523 313 aa11.78□□□□□ -0.52
CALD1-210ENST00000443197 FBXL16Q8N461 479 aa11.78□□□□□ -0.52
CALD1-210ENST00000443197 TUBGCP2Q9BSJ2 902 aa11.78□□□□□ -0.52
CALD1-210ENST00000443197 SUGT1Q9Y2Z0 365 aa11.78□□□□□ -0.52
CALD1-210ENST00000443197 PHRF1Q9P1Y6 1649 aaKnown RBP11.78□□□□□ -0.52
CALD1-210ENST00000443197 CTAGE9A4FU28 777 aa11.78□□□□□ -0.52
CALD1-210ENST00000443197 PRPF4BQ13523 1007 aaKnown RBP11.78□□□□□ -0.52
CALD1-210ENST00000443197 PPP4R3AQ6IN85 833 aa11.78□□□□□ -0.52
CALD1-210ENST00000443197 TXLNBQ8N3L3 684 aa11.78□□□□□ -0.52
CALD1-210ENST00000443197 FUCA2Q9BTY2 467 aa11.78□□□□□ -0.52
CALD1-210ENST00000443197 SPZ1Q9BXG8 430 aa11.78□□□□□ -0.52
CALD1-210ENST00000443197 LRRC37A3O60309 1634 aa11.77□□□□□ -0.52
CALD1-210ENST00000443197 TEX33O43247 280 aa11.77□□□□□ -0.52
CALD1-210ENST00000443197 KRT86O43790 486 aa11.77□□□□□ -0.52
CALD1-210ENST00000443197 NDUFB10O96000 172 aa11.77□□□□□ -0.52
CALD1-210ENST00000443197 RCSD1Q6JBY9 416 aa11.77□□□□□ -0.52
CALD1-210ENST00000443197 TYW1BQ6NUM6 668 aa11.77□□□□□ -0.52
CALD1-210ENST00000443197 PAXIP1Q6ZW49 1069 aaPredicted RBP11.77□□□□□ -0.52
CALD1-210ENST00000443197 ALS2Q96Q42 1657 aa11.77□□□□□ -0.52
CALD1-210ENST00000443197 TRPM3Q9HCF6 1732 aaPredicted RBP11.77□□□□□ -0.53
CALD1-210ENST00000443197 E9PMD0 336 aa11.77□□□□□ -0.53
CALD1-210ENST00000443197 SLFN12Q8IYM2 578 aa11.77□□□□□ -0.53
CALD1-210ENST00000443197 CERS5Q8N5B7 392 aa11.77□□□□□ -0.53
CALD1-210ENST00000443197 CCDC102AQ96A19 550 aa11.77□□□□□ -0.53
CALD1-210ENST00000443197 FAM212AQ96EL1 285 aa11.77□□□□□ -0.53
CALD1-210ENST00000443197 CNOT6LQ96LI5 555 aaKnown RBP11.77□□□□□ -0.53
CALD1-210ENST00000443197 FOSP01100 380 aaPredicted RBP11.77□□□□□ -0.53
CALD1-210ENST00000443197 EIF2AK2P19525 551 aaKnown RBP11.77□□□□□ -0.53
CALD1-210ENST00000443197 RPL13P26373 211 aaKnown RBP11.77□□□□□ -0.53
CALD1-210ENST00000443197 KRT83P78385 493 aa11.77□□□□□ -0.53
CALD1-210ENST00000443197 CYP26C1Q6V0L0 522 aa11.77□□□□□ -0.53
CALD1-210ENST00000443197 MIER3Q7Z3K6 550 aa11.77□□□□□ -0.53
CALD1-210ENST00000443197 MYRIPQ8NFW9 859 aa11.77□□□□□ -0.53
CALD1-210ENST00000443197 PIGOQ8TEQ8 1089 aa11.77□□□□□ -0.53
CALD1-210ENST00000443197 ZNF384Q8TF68 577 aa11.77□□□□□ -0.53
CALD1-210ENST00000443197 PPP2R2CQ9Y2T4 447 aa11.77□□□□□ -0.53
CALD1-210ENST00000443197 FAM205AQ6ZU69 1335 aa11.77□□□□□ -0.53
CALD1-210ENST00000443197 BCL9LQ86UU0 1499 aa11.77□□□□□ -0.53
CALD1-210ENST00000443197 ERLIN1O75477 346 aa11.76□□□□□ -0.53
CALD1-210ENST00000443197 RHOXF2BP0C7M4 288 aa11.76□□□□□ -0.53
CALD1-210ENST00000443197 PAFAH1B1P43034 410 aa11.76□□□□□ -0.53
CALD1-210ENST00000443197 CYP2J2P51589 502 aa11.76□□□□□ -0.53
CALD1-210ENST00000443197 CTTNQ14247 550 aaKnown RBP11.76□□□□□ -0.53
CALD1-210ENST00000443197 ARHGEF16Q5VV41 709 aa11.76□□□□□ -0.53
CALD1-210ENST00000443197 ALS2CR12Q96Q35 445 aa11.76□□□□□ -0.53
CALD1-210ENST00000443197 RHOXF2Q9BQY4 288 aa11.76□□□□□ -0.53
CALD1-210ENST00000443197 CENPHQ9H3R5 247 aa11.76□□□□□ -0.53
CALD1-210ENST00000443197 JMJD4Q9H9V9 463 aa11.76□□□□□ -0.53
CALD1-210ENST00000443197 SCN11AQ9UI33 1791 aa11.76□□□□□ -0.53
CALD1-210ENST00000443197 POLR3GO15318 223 aaPredicted RBP11.76□□□□□ -0.53
CALD1-210ENST00000443197 ASNSP08243 561 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms