RNA–Protein interactions for RNA: ENST00000442515.5

LINC00642-202, long intergenic non-protein coding RNA 642, humanhuman

TSL 3 BASIC

Gene LINC00642, Length 670 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00642-202ENST00000442515 PPP1R13LQ8WUF5 828 aa16.64■□□□□ 0.25
LINC00642-202ENST00000442515 MKL1Q969V6 931 aa16.64■□□□□ 0.25
LINC00642-202ENST00000442515 TRERF1Q96PN7 1200 aa16.64■□□□□ 0.25
LINC00642-202ENST00000442515 MTG1Q9BT17 334 aaPredicted RBP16.64■□□□□ 0.25
LINC00642-202ENST00000442515 BCL11AQ9H165 835 aa16.64■□□□□ 0.25
LINC00642-202ENST00000442515 ISY1Q9ULR0 285 aaKnown RBP16.64■□□□□ 0.25
LINC00642-202ENST00000442515 SYNPO2Q9UMS6 1093 aa16.64■□□□□ 0.25
LINC00642-202ENST00000442515 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.63■□□□□ 0.25
LINC00642-202ENST00000442515 TMEM232C9JQI7 657 aa16.63■□□□□ 0.25
LINC00642-202ENST00000442515 TTLL1O95922 423 aa16.63■□□□□ 0.25
LINC00642-202ENST00000442515 ALAS1P13196 640 aa16.63■□□□□ 0.25
LINC00642-202ENST00000442515 CPT1AP50416 773 aa16.63■□□□□ 0.25
LINC00642-202ENST00000442515 STAT2P52630 851 aa16.63■□□□□ 0.25
LINC00642-202ENST00000442515 WDR5P61964 334 aaKnown RBP16.63■□□□□ 0.25
LINC00642-202ENST00000442515 NBPF20Q3BBV1 942 aa16.63■□□□□ 0.25
LINC00642-202ENST00000442515 SBK1Q52WX2 424 aa16.63■□□□□ 0.25
LINC00642-202ENST00000442515 MORC4Q8TE76 937 aa16.63■□□□□ 0.25
LINC00642-202ENST00000442515 KIF1BPQ96EK5 621 aa16.63■□□□□ 0.25
LINC00642-202ENST00000442515 PURBQ96QR8 312 aaKnown RBP16.63■□□□□ 0.25
LINC00642-202ENST00000442515 SUGCTQ9HAC7 445 aa16.63■□□□□ 0.25
LINC00642-202ENST00000442515 MTMR4Q9NYA4 1195 aa16.63■□□□□ 0.25
LINC00642-202ENST00000442515 CYP39A1Q9NYL5 469 aa16.63■□□□□ 0.25
LINC00642-202ENST00000442515 MINDY4BA8MYZ0 360 aa16.62■□□□□ 0.25
LINC00642-202ENST00000442515 PRDM1O75626 825 aa16.62■□□□□ 0.25
LINC00642-202ENST00000442515 BFSP2Q13515 415 aa16.62■□□□□ 0.25
LINC00642-202ENST00000442515 MUM1L1Q5H9M0 696 aa16.62■□□□□ 0.25
LINC00642-202ENST00000442515 PTCRAQ6ISU1 281 aaPredicted RBP16.62■□□□□ 0.25
LINC00642-202ENST00000442515 NFRKBQ6P4R8 1299 aa16.62■□□□□ 0.25
LINC00642-202ENST00000442515 HAUS7Q99871 368 aa16.62■□□□□ 0.25
LINC00642-202ENST00000442515 GPHNQ9NQX3 736 aaPredicted RBP16.62■□□□□ 0.25
LINC00642-202ENST00000442515 DCXO43602 365 aa16.61■□□□□ 0.25
LINC00642-202ENST00000442515 DEFB103AP81534 67 aa16.61■□□□□ 0.25
LINC00642-202ENST00000442515 IKQ13123 557 aaPredicted RBP16.61■□□□□ 0.25
LINC00642-202ENST00000442515 NSMFQ6X4W1 530 aa16.61■□□□□ 0.25
LINC00642-202ENST00000442515 OR6J1Q8NGC5 347 aa16.61■□□□□ 0.25
LINC00642-202ENST00000442515 TGS1Q96RS0 853 aaKnown RBP16.61■□□□□ 0.25
LINC00642-202ENST00000442515 ZBED2Q9BTP6 218 aa16.61■□□□□ 0.25
LINC00642-202ENST00000442515 WDR11Q9BZH6 1224 aa16.61■□□□□ 0.25
LINC00642-202ENST00000442515 KCNH6Q9H252 994 aa16.61■□□□□ 0.25
LINC00642-202ENST00000442515 SCN5AQ14524 2016 aa16.61■□□□□ 0.25
LINC00642-202ENST00000442515 CFAP54Q96N23 3096 aa16.61■□□□□ 0.25
LINC00642-202ENST00000442515 GRXCR2A6NFK2 248 aa16.6■□□□□ 0.25
LINC00642-202ENST00000442515 GSG1L2A8MUP6 293 aa16.6■□□□□ 0.25
LINC00642-202ENST00000442515 ATP5JP18859 108 aa16.6■□□□□ 0.25
LINC00642-202ENST00000442515 SNAP25P60880 206 aa16.6■□□□□ 0.25
LINC00642-202ENST00000442515 ERVK-21P61565 698 aa16.6■□□□□ 0.25
LINC00642-202ENST00000442515 FAM160B2Q86V87 743 aa16.6■□□□□ 0.25
LINC00642-202ENST00000442515 ZNF444Q8N0Y2 327 aaPredicted RBP16.6■□□□□ 0.25
LINC00642-202ENST00000442515 STAG1Q8WVM7 1258 aa16.6■□□□□ 0.25
LINC00642-202ENST00000442515 STRBPQ96SI9 672 aaKnown RBP16.6■□□□□ 0.25
LINC00642-202ENST00000442515 NOD1Q9Y239 953 aa16.6■□□□□ 0.25
LINC00642-202ENST00000442515 GJB5O95377 273 aa16.59■□□□□ 0.25
LINC00642-202ENST00000442515 GPNMBQ14956 572 aa16.59■□□□□ 0.25
LINC00642-202ENST00000442515 LRRFIP1Q32MZ4 808 aaKnown RBP16.59■□□□□ 0.25
LINC00642-202ENST00000442515 GIMAP6Q6P9H5 292 aa16.59■□□□□ 0.25
LINC00642-202ENST00000442515 CHURC1Q8WUH1 139 aa16.59■□□□□ 0.25
LINC00642-202ENST00000442515 CHMP4CQ96CF2 233 aa16.59■□□□□ 0.25
LINC00642-202ENST00000442515 GMCL1Q96IK5 515 aa16.59■□□□□ 0.25
LINC00642-202ENST00000442515 TRIOO75962 3097 aa16.59■□□□□ 0.25
LINC00642-202ENST00000442515 PLIN4Q96Q06 1357 aa16.59■□□□□ 0.25
LINC00642-202ENST00000442515 TANC1Q9C0D5 1861 aa16.59■□□□□ 0.25
LINC00642-202ENST00000442515 LINC01553A4QN01 128 aa16.58■□□□□ 0.24
LINC00642-202ENST00000442515 SLC1A4P43007 532 aa16.58■□□□□ 0.24
LINC00642-202ENST00000442515 ALDH5A1P51649 535 aaPredicted RBP16.58■□□□□ 0.24
LINC00642-202ENST00000442515 PTPN11Q06124 597 aaPredicted RBP16.58■□□□□ 0.24
LINC00642-202ENST00000442515 BRDTQ58F21 947 aaPredicted RBP16.58■□□□□ 0.24
LINC00642-202ENST00000442515 ZSCAN25Q6NSZ9 544 aa16.58■□□□□ 0.24
LINC00642-202ENST00000442515 CAGE1Q8TC20 777 aa16.58■□□□□ 0.24
LINC00642-202ENST00000442515 AFAP1L1Q8TED9 768 aa16.58■□□□□ 0.24
LINC00642-202ENST00000442515 RAD9AQ99638 391 aa16.58■□□□□ 0.24
LINC00642-202ENST00000442515 EPB41L4AQ9HCS5 686 aaPredicted RBP16.58■□□□□ 0.24
LINC00642-202ENST00000442515 CCPG1Q9ULG6 757 aa16.58■□□□□ 0.24
LINC00642-202ENST00000442515 C5orf42Q9H799 3197 aa16.57■□□□□ 0.24
LINC00642-202ENST00000442515 RAD50Q92878 1312 aa16.57■□□□□ 0.24
LINC00642-202ENST00000442515 RBM47A0AV96 593 aaKnown RBP16.57■□□□□ 0.24
LINC00642-202ENST00000442515 POTEB3A0JP26 581 aa16.57■□□□□ 0.24
LINC00642-202ENST00000442515 H3BQ06 376 aaPredicted RBP16.57■□□□□ 0.24
LINC00642-202ENST00000442515 MCCP23508 829 aa16.57■□□□□ 0.24
LINC00642-202ENST00000442515 PPP2R5BQ15173 497 aa16.57■□□□□ 0.24
LINC00642-202ENST00000442515 PUS10Q3MIT2 529 aaKnown RBP16.57■□□□□ 0.24
LINC00642-202ENST00000442515 POTEBQ6S5H4 581 aa16.57■□□□□ 0.24
LINC00642-202ENST00000442515 KCTD1Q719H9 257 aa16.57■□□□□ 0.24
LINC00642-202ENST00000442515 NEK9Q8TD19 979 aa16.57■□□□□ 0.24
LINC00642-202ENST00000442515 ANKS1AQ92625 1134 aa16.57■□□□□ 0.24
LINC00642-202ENST00000442515 ZNF287Q9HBT7 754 aa16.57■□□□□ 0.24
LINC00642-202ENST00000442515 ADD3Q9UEY8 706 aaKnown RBP16.57■□□□□ 0.24
LINC00642-202ENST00000442515 SCN10AQ9Y5Y9 1956 aa16.57■□□□□ 0.24
LINC00642-202ENST00000442515 A6NJR5 290 aa16.56■□□□□ 0.24
LINC00642-202ENST00000442515 PLA2G6O60733 806 aa16.56■□□□□ 0.24
LINC00642-202ENST00000442515 TSPY3P0CV98 308 aa16.56■□□□□ 0.24
LINC00642-202ENST00000442515 TSPY8P0CW00 308 aa16.56■□□□□ 0.24
LINC00642-202ENST00000442515 TDO2P48775 406 aa16.56■□□□□ 0.24
LINC00642-202ENST00000442515 ZP2Q05996 745 aa16.56■□□□□ 0.24
LINC00642-202ENST00000442515 BAATQ14032 418 aaPredicted RBP16.56■□□□□ 0.24
LINC00642-202ENST00000442515 PTGISQ16647 500 aa16.56■□□□□ 0.24
LINC00642-202ENST00000442515 TCTN1Q2MV58 587 aa16.56■□□□□ 0.24
LINC00642-202ENST00000442515 CNKSR3Q6P9H4 555 aa16.56■□□□□ 0.24
LINC00642-202ENST00000442515 HFE2Q6ZVN8 426 aa16.56■□□□□ 0.24
LINC00642-202ENST00000442515 LRRC8DQ7L1W4 858 aa16.56■□□□□ 0.24
LINC00642-202ENST00000442515 RASGRP2Q7LDG7 609 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms