RNA–Protein interactions for RNA: ENST00000440915.1

AP004290.1-201, humanhuman

BASIC

Gene AP004290.1, Length 1,412 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP004290.1-201ENST00000440915 ATL3Q6DD88 541 aa11.77□□□□□ -0.53
AP004290.1-201ENST00000440915 MCTP2Q6DN12 878 aa11.77□□□□□ -0.53
AP004290.1-201ENST00000440915 MCF2L2Q86YR7 1114 aa11.77□□□□□ -0.53
AP004290.1-201ENST00000440915 RIOX2Q8IUF8 465 aa11.77□□□□□ -0.53
AP004290.1-201ENST00000440915 TEX2Q8IWB9 1127 aa11.77□□□□□ -0.53
AP004290.1-201ENST00000440915 SAMD3Q8N6K7 520 aa11.77□□□□□ -0.53
AP004290.1-201ENST00000440915 PGBD1Q96JS3 809 aa11.77□□□□□ -0.53
AP004290.1-201ENST00000440915 USP28Q96RU2 1077 aa11.77□□□□□ -0.53
AP004290.1-201ENST00000440915 SPATC1LQ9H0A9 340 aa11.77□□□□□ -0.53
AP004290.1-201ENST00000440915 TXNRD2Q9NNW7 524 aa11.77□□□□□ -0.53
AP004290.1-201ENST00000440915 ZCCHC17Q9NP64 241 aaKnown RBP11.77□□□□□ -0.53
AP004290.1-201ENST00000440915 RNF146Q9NTX7 359 aa11.77□□□□□ -0.53
AP004290.1-201ENST00000440915 SMCHD1A6NHR9 2005 aa11.76□□□□□ -0.53
AP004290.1-201ENST00000440915 GCOM1H8Y6P7 765 aaPredicted RBP11.76□□□□□ -0.53
AP004290.1-201ENST00000440915 FOSP01100 380 aaPredicted RBP11.76□□□□□ -0.53
AP004290.1-201ENST00000440915 POLR2MP0CAP2 368 aa11.76□□□□□ -0.53
AP004290.1-201ENST00000440915 NCLP19338 710 aaKnown RBP11.76□□□□□ -0.53
AP004290.1-201ENST00000440915 HOXA13P31271 388 aaPredicted RBP11.76□□□□□ -0.53
AP004290.1-201ENST00000440915 TM4SF4P48230 202 aa11.76□□□□□ -0.53
AP004290.1-201ENST00000440915 HSD17B4P51659 736 aa11.76□□□□□ -0.53
AP004290.1-201ENST00000440915 KRT85P78386 507 aa11.76□□□□□ -0.53
AP004290.1-201ENST00000440915 GHRHRQ02643 423 aa11.76□□□□□ -0.53
AP004290.1-201ENST00000440915 AP3B2Q13367 1082 aa11.76□□□□□ -0.53
AP004290.1-201ENST00000440915 Q3C1V9 767 aa11.76□□□□□ -0.53
AP004290.1-201ENST00000440915 RILPL1Q5EBL4 403 aa11.76□□□□□ -0.53
AP004290.1-201ENST00000440915 IFNL1Q8IU54 200 aa11.76□□□□□ -0.53
AP004290.1-201ENST00000440915 CHST13Q8NET6 341 aa11.76□□□□□ -0.53
AP004290.1-201ENST00000440915 SMCR8Q8TEV9 937 aaPredicted RBP11.76□□□□□ -0.53
AP004290.1-201ENST00000440915 ZIC5Q96T25 663 aa11.76□□□□□ -0.53
AP004290.1-201ENST00000440915 PARK7Q99497 189 aaKnown RBP11.76□□□□□ -0.53
AP004290.1-201ENST00000440915 MOV10L1Q9BXT6 1211 aaKnown RBP11.76□□□□□ -0.53
AP004290.1-201ENST00000440915 MAP3K20Q9NYL2 800 aaKnown RBP11.76□□□□□ -0.53
AP004290.1-201ENST00000440915 CFAP45Q9UL16 551 aa11.76□□□□□ -0.53
AP004290.1-201ENST00000440915 NOL7Q9UMY1 257 aaKnown RBP11.76□□□□□ -0.53
AP004290.1-201ENST00000440915 CLIC4Q9Y696 253 aa11.76□□□□□ -0.53
AP004290.1-201ENST00000440915 GCLCP48506 637 aaPredicted RBP11.75□□□□□ -0.53
AP004290.1-201ENST00000440915 TRAPPC10P48553 1259 aa11.75□□□□□ -0.53
AP004290.1-201ENST00000440915 ERVK-9P63128 1117 aa11.75□□□□□ -0.53
AP004290.1-201ENST00000440915 ERVK-24P63145 666 aa11.75□□□□□ -0.53
AP004290.1-201ENST00000440915 CEBPZQ03701 1054 aaKnown RBP11.75□□□□□ -0.53
AP004290.1-201ENST00000440915 NOGQ13253 232 aa11.75□□□□□ -0.53
AP004290.1-201ENST00000440915 NBR1Q14596 966 aa11.75□□□□□ -0.53
AP004290.1-201ENST00000440915 TBCKQ8TEA7 893 aa11.75□□□□□ -0.53
AP004290.1-201ENST00000440915 CAPNS2Q96L46 248 aa11.75□□□□□ -0.53
AP004290.1-201ENST00000440915 FTOQ9C0B1 505 aaKnown RBP eCLIP11.75□□□□□ -0.53
AP004290.1-201ENST00000440915 ACAD9Q9H845 621 aa11.75□□□□□ -0.53
AP004290.1-201ENST00000440915 RTEL1Q9NZ71 1219 aa11.75□□□□□ -0.53
AP004290.1-201ENST00000440915 SPDYE3A6NKU9 549 aa11.74□□□□□ -0.53
AP004290.1-201ENST00000440915 WNT7AO00755 349 aa11.74□□□□□ -0.53
AP004290.1-201ENST00000440915 FIBPO43427 364 aa11.74□□□□□ -0.53
AP004290.1-201ENST00000440915 AOC2O75106 756 aa11.74□□□□□ -0.53
AP004290.1-201ENST00000440915 SLC25A27O95847 323 aa11.74□□□□□ -0.53
AP004290.1-201ENST00000440915 ATP2B1P20020 1258 aa11.74□□□□□ -0.53
AP004290.1-201ENST00000440915 MCM4P33991 863 aa11.74□□□□□ -0.53
AP004290.1-201ENST00000440915 COPB2P35606 906 aa11.74□□□□□ -0.53
AP004290.1-201ENST00000440915 SF3A1Q15459 793 aaKnown RBP11.74□□□□□ -0.53
AP004290.1-201ENST00000440915 INF2Q27J81 1249 aa11.74□□□□□ -0.53
AP004290.1-201ENST00000440915 TTC38Q5R3I4 469 aa11.74□□□□□ -0.53
AP004290.1-201ENST00000440915 ANO1Q5XXA6 986 aa11.74□□□□□ -0.53
AP004290.1-201ENST00000440915 NSMFQ6X4W1 530 aa11.74□□□□□ -0.53
AP004290.1-201ENST00000440915 RNF207Q6ZRF8 634 aa11.74□□□□□ -0.53
AP004290.1-201ENST00000440915 FCHSD1Q86WN1 690 aa11.74□□□□□ -0.53
AP004290.1-201ENST00000440915 NCAPG2Q86XI2 1143 aa11.74□□□□□ -0.53
AP004290.1-201ENST00000440915 ANKRD13CQ8N6S4 541 aa11.74□□□□□ -0.53
AP004290.1-201ENST00000440915 GPRC5AQ8NFJ5 357 aa11.74□□□□□ -0.53
AP004290.1-201ENST00000440915 ANO3Q9BYT9 981 aa11.74□□□□□ -0.53
AP004290.1-201ENST00000440915 SCAND2PQ9GZW5 306 aaPredicted RBP11.74□□□□□ -0.53
AP004290.1-201ENST00000440915 MAF1Q9H063 256 aa11.74□□□□□ -0.53
AP004290.1-201ENST00000440915 GDPD2Q9HCC8 539 aa11.74□□□□□ -0.53
AP004290.1-201ENST00000440915 POLR3EQ9NVU0 708 aa11.74□□□□□ -0.53
AP004290.1-201ENST00000440915 MORF4L1Q9UBU8 362 aa11.74□□□□□ -0.53
AP004290.1-201ENST00000440915 FBXO40Q9UH90 709 aa11.74□□□□□ -0.53
AP004290.1-201ENST00000440915 PCDHB6Q9Y5E3 794 aa11.74□□□□□ -0.53
AP004290.1-201ENST00000440915 RBBP6Q7Z6E9 1792 aaKnown RBP11.74□□□□□ -0.53
AP004290.1-201ENST00000440915 ADGRA2Q96PE1 1338 aa11.74□□□□□ -0.53
AP004290.1-201ENST00000440915 EDIL3O43854 480 aa11.73□□□□□ -0.53
AP004290.1-201ENST00000440915 YEATS4O95619 227 aa11.73□□□□□ -0.53
AP004290.1-201ENST00000440915 ERCC3P19447 782 aa11.73□□□□□ -0.53
AP004290.1-201ENST00000440915 NASPP49321 788 aaPredicted RBP11.73□□□□□ -0.53
AP004290.1-201ENST00000440915 RPS6P62753 249 aaKnown RBP11.73□□□□□ -0.53
AP004290.1-201ENST00000440915 BAATQ14032 418 aaPredicted RBP11.73□□□□□ -0.53
AP004290.1-201ENST00000440915 TAF1CQ15572 869 aaPredicted RBP11.73□□□□□ -0.53
AP004290.1-201ENST00000440915 NFKBIBQ15653 356 aa11.73□□□□□ -0.53
AP004290.1-201ENST00000440915 ZNF174Q15697 407 aa11.73□□□□□ -0.53
AP004290.1-201ENST00000440915 SLC30A10Q6XR72 485 aa11.73□□□□□ -0.53
AP004290.1-201ENST00000440915 NEK8Q86SG6 692 aa11.73□□□□□ -0.53
AP004290.1-201ENST00000440915 SYTL5Q8TDW5 730 aaPredicted RBP11.73□□□□□ -0.53
AP004290.1-201ENST00000440915 LEO1Q8WVC0 666 aaPredicted RBP11.73□□□□□ -0.53
AP004290.1-201ENST00000440915 SPATA32Q96LK8 384 aa11.73□□□□□ -0.53
AP004290.1-201ENST00000440915 R3HDMLQ9H3Y0 253 aa11.73□□□□□ -0.53
AP004290.1-201ENST00000440915 A1CFQ9NQ94 594 aaKnown RBP11.73□□□□□ -0.53
AP004290.1-201ENST00000440915 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.73□□□□□ -0.53
AP004290.1-201ENST00000440915 COL20A1Q9P218 1284 aa11.73□□□□□ -0.53
AP004290.1-201ENST00000440915 RCOR1Q9UKL0 485 aa11.73□□□□□ -0.53
AP004290.1-201ENST00000440915 GOLGA6L22H0YM25 854 aa11.72□□□□□ -0.53
AP004290.1-201ENST00000440915 SREBF1P36956 1147 aa11.72□□□□□ -0.53
AP004290.1-201ENST00000440915 CCNA1P78396 465 aa11.72□□□□□ -0.53
AP004290.1-201ENST00000440915 PTPAQ15257 358 aa11.72□□□□□ -0.53
AP004290.1-201ENST00000440915 CSPP1Q1MSJ5 1256 aa11.72□□□□□ -0.53
AP004290.1-201ENST00000440915 LETM2Q2VYF4 491 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms