RNA–Protein interactions for RNA: ENST00000440421.2

LTBR-202, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 729 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-202ENST00000440421 RXRAP19793 462 aa15.96■□□□□ 0.15
LTBR-202ENST00000440421 PTGS1P23219 599 aa15.96■□□□□ 0.15
LTBR-202ENST00000440421 RTP1P59025 263 aa15.96■□□□□ 0.15
LTBR-202ENST00000440421 ADCK5Q3MIX3 580 aa15.96■□□□□ 0.15
LTBR-202ENST00000440421 SLC39A5Q6ZMH5 540 aa15.96■□□□□ 0.15
LTBR-202ENST00000440421 MCF2L2Q86YR7 1114 aa15.96■□□□□ 0.15
LTBR-202ENST00000440421 TMTC2Q8N394 836 aa15.96■□□□□ 0.15
LTBR-202ENST00000440421 RGS22Q8NE09 1264 aa15.96■□□□□ 0.15
LTBR-202ENST00000440421 CTCFLQ8NI51 663 aaPredicted RBP15.96■□□□□ 0.15
LTBR-202ENST00000440421 MORC4Q8TE76 937 aa15.96■□□□□ 0.15
LTBR-202ENST00000440421 MTMR8Q96EF0 704 aa15.96■□□□□ 0.15
LTBR-202ENST00000440421 TCEANC2Q96MN5 208 aa15.96■□□□□ 0.15
LTBR-202ENST00000440421 MTA3Q9BTC8 594 aa15.96■□□□□ 0.15
LTBR-202ENST00000440421 RIOX1Q9H6W3 641 aa15.96■□□□□ 0.15
LTBR-202ENST00000440421 SPC25Q9HBM1 224 aa15.96■□□□□ 0.15
LTBR-202ENST00000440421 VTA1Q9NP79 307 aa15.96■□□□□ 0.15
LTBR-202ENST00000440421 ATP11BQ9Y2G3 1177 aa15.96■□□□□ 0.15
LTBR-202ENST00000440421 PCDHA1Q9Y5I3 950 aa15.96■□□□□ 0.15
LTBR-202ENST00000440421 A0A1W2PQ45 241 aaPredicted RBP15.95■□□□□ 0.14
LTBR-202ENST00000440421 A0A1W2PQY0 241 aa15.95■□□□□ 0.14
LTBR-202ENST00000440421 CFBP00751 764 aa15.95■□□□□ 0.14
LTBR-202ENST00000440421 SMPD1P17405 629 aa15.95■□□□□ 0.14
LTBR-202ENST00000440421 KIF5BP33176 963 aa15.95■□□□□ 0.14
LTBR-202ENST00000440421 PDE4DQ08499 809 aa15.95■□□□□ 0.14
LTBR-202ENST00000440421 KCNA10Q16322 511 aa15.95■□□□□ 0.14
LTBR-202ENST00000440421 HABP4Q5JVS0 413 aaKnown RBP15.95■□□□□ 0.14
LTBR-202ENST00000440421 TMEM63BQ5T3F8 832 aa15.95■□□□□ 0.14
LTBR-202ENST00000440421 TAPT1Q6NXT6 567 aa15.95■□□□□ 0.14
LTBR-202ENST00000440421 KLHDC9Q8NEP7 349 aa15.95■□□□□ 0.14
LTBR-202ENST00000440421 DNERQ8NFT8 737 aa15.95■□□□□ 0.14
LTBR-202ENST00000440421 SYTL5Q8TDW5 730 aaPredicted RBP15.95■□□□□ 0.14
LTBR-202ENST00000440421 TAAR1Q96RJ0 339 aa15.95■□□□□ 0.14
LTBR-202ENST00000440421 MPHOSPH6Q99547 160 aaKnown RBP15.95■□□□□ 0.14
LTBR-202ENST00000440421 COL20A1Q9P218 1284 aa15.95■□□□□ 0.14
LTBR-202ENST00000440421 CEP290O15078 2479 aa15.95■□□□□ 0.14
LTBR-202ENST00000440421 LIFRP42702 1097 aa15.94■□□□□ 0.14
LTBR-202ENST00000440421 ACLYP53396 1101 aa15.94■□□□□ 0.14
LTBR-202ENST00000440421 GJA9P57773 515 aa15.94■□□□□ 0.14
LTBR-202ENST00000440421 BEX3Q00994 111 aa15.94■□□□□ 0.14
LTBR-202ENST00000440421 TRIM60Q495X7 471 aa15.94■□□□□ 0.14
LTBR-202ENST00000440421 GNASQ5JWF2 1037 aa15.94■□□□□ 0.14
LTBR-202ENST00000440421 CMTR1Q8N1G2 835 aaKnown RBP15.94■□□□□ 0.14
LTBR-202ENST00000440421 TSEN34Q9BSV6 310 aaKnown RBP15.94■□□□□ 0.14
LTBR-202ENST00000440421 UPF3AQ9H1J1 476 aaKnown RBP15.94■□□□□ 0.14
LTBR-202ENST00000440421 RBM27Q9P2N5 1060 aaKnown RBP15.94■□□□□ 0.14
LTBR-202ENST00000440421 SLC12A7Q9Y666 1083 aa15.94■□□□□ 0.14
LTBR-202ENST00000440421 BAZ2BQ9UIF8 2168 aaKnown RBP15.93■□□□□ 0.14
LTBR-202ENST00000440421 LOC102724159A0A0B4J2E5 919 aa15.93■□□□□ 0.14
LTBR-202ENST00000440421 PNMA6FA0A0J9YX94 578 aa15.93■□□□□ 0.14
LTBR-202ENST00000440421 OPLAHO14841 1288 aa15.93■□□□□ 0.14
LTBR-202ENST00000440421 DYNC1LI2O43237 492 aaPredicted RBP15.93■□□□□ 0.14
LTBR-202ENST00000440421 PLEKHA8P1O95397 391 aa15.93■□□□□ 0.14
LTBR-202ENST00000440421 EXOSC10Q01780 885 aaKnown RBP15.93■□□□□ 0.14
LTBR-202ENST00000440421 KRT32Q14532 448 aa15.93■□□□□ 0.14
LTBR-202ENST00000440421 PWP2Q15269 919 aaKnown RBP15.93■□□□□ 0.14
LTBR-202ENST00000440421 TSGA10IPQ3SY00 556 aa15.93■□□□□ 0.14
LTBR-202ENST00000440421 IQSEC1Q6DN90 963 aa15.93■□□□□ 0.14
LTBR-202ENST00000440421 CCSAPQ6IQ19 270 aaPredicted RBP15.93■□□□□ 0.14
LTBR-202ENST00000440421 DHX32Q7L7V1 743 aaKnown RBP15.93■□□□□ 0.14
LTBR-202ENST00000440421 TLK2Q86UE8 772 aa15.93■□□□□ 0.14
LTBR-202ENST00000440421 MAP3K14Q99558 947 aa15.93■□□□□ 0.14
LTBR-202ENST00000440421 AP5M1Q9H0R1 490 aa15.93■□□□□ 0.14
LTBR-202ENST00000440421 STARD7Q9NQZ5 370 aa15.93■□□□□ 0.14
LTBR-202ENST00000440421 GNEQ9Y223 722 aaKnown RBP15.93■□□□□ 0.14
LTBR-202ENST00000440421 MOXD2PA6NHM9 499 aa15.92■□□□□ 0.14
LTBR-202ENST00000440421 B4DLN1 442 aa15.92■□□□□ 0.14
LTBR-202ENST00000440421 CTAGE5O15320 804 aa15.92■□□□□ 0.14
LTBR-202ENST00000440421 REC8O95072 547 aa15.92■□□□□ 0.14
LTBR-202ENST00000440421 ASGR1P07306 291 aa15.92■□□□□ 0.14
LTBR-202ENST00000440421 CALM1P0DP23 149 aa15.92■□□□□ 0.14
LTBR-202ENST00000440421 CALM2P0DP24 149 aa15.92■□□□□ 0.14
LTBR-202ENST00000440421 CALM3P0DP25 149 aa15.92■□□□□ 0.14
LTBR-202ENST00000440421 EDNRBP24530 442 aa15.92■□□□□ 0.14
LTBR-202ENST00000440421 CST5P28325 142 aaPredicted RBP15.92■□□□□ 0.14
LTBR-202ENST00000440421 HOXA13P31271 388 aaPredicted RBP15.92■□□□□ 0.14
LTBR-202ENST00000440421 HSPA4P34932 840 aa15.92■□□□□ 0.14
LTBR-202ENST00000440421 MRPL12P52815 198 aaKnown RBP15.92■□□□□ 0.14
LTBR-202ENST00000440421 MICU3Q86XE3 530 aa15.92■□□□□ 0.14
LTBR-202ENST00000440421 PCSK9Q8NBP7 692 aaKnown RBP15.92■□□□□ 0.14
LTBR-202ENST00000440421 NSUN6Q8TEA1 469 aaKnown RBP15.92■□□□□ 0.14
LTBR-202ENST00000440421 VTI1AQ96AJ9 217 aa15.92■□□□□ 0.14
LTBR-202ENST00000440421 RRP36Q96EU6 259 aaKnown RBP15.92■□□□□ 0.14
LTBR-202ENST00000440421 RMDN3Q96TC7 470 aa15.92■□□□□ 0.14
LTBR-202ENST00000440421 SPZ1Q9BXG8 430 aa15.92■□□□□ 0.14
LTBR-202ENST00000440421 WDR11Q9BZH6 1224 aa15.92■□□□□ 0.14
LTBR-202ENST00000440421 MAF1Q9H063 256 aa15.92■□□□□ 0.14
LTBR-202ENST00000440421 CPA1P15085 419 aa15.91■□□□□ 0.14
LTBR-202ENST00000440421 EIF2AK2P19525 551 aaKnown RBP15.91■□□□□ 0.14
LTBR-202ENST00000440421 MAGEA10P43363 369 aaPredicted RBP15.91■□□□□ 0.14
LTBR-202ENST00000440421 GNAQP50148 359 aa15.91■□□□□ 0.14
LTBR-202ENST00000440421 HSD17B4P51659 736 aa15.91■□□□□ 0.14
LTBR-202ENST00000440421 TLE2Q04725 743 aa15.91■□□□□ 0.14
LTBR-202ENST00000440421 TRAF1Q13077 416 aa15.91■□□□□ 0.14
LTBR-202ENST00000440421 SNX17Q15036 470 aa15.91■□□□□ 0.14
LTBR-202ENST00000440421 FSCN1Q16658 493 aaKnown RBP15.91■□□□□ 0.14
LTBR-202ENST00000440421 ARHGEF16Q5VV41 709 aa15.91■□□□□ 0.14
LTBR-202ENST00000440421 SYNE3Q6ZMZ3 975 aa15.91■□□□□ 0.14
LTBR-202ENST00000440421 SGMS1Q86VZ5 419 aa15.91■□□□□ 0.14
LTBR-202ENST00000440421 CCDC82Q8N4S0 544 aa15.91■□□□□ 0.14
LTBR-202ENST00000440421 SRBD1Q8N5C6 995 aaKnown RBP15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms