RNA–Protein interactions for RNA: ENST00000439958.7

CPSF7-205, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CPSF7, Length 3,524 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-205ENST00000439958 HMGCS2P54868 508 aa17■□□□□ 0.31
CPSF7-205ENST00000439958 SULF1Q8IWU6 871 aa17■□□□□ 0.31
CPSF7-205ENST00000439958 ZNF713Q8N859 430 aaPredicted RBP17■□□□□ 0.31
CPSF7-205ENST00000439958 AGBL1Q96MI9 1066 aa17■□□□□ 0.31
CPSF7-205ENST00000439958 PES1O00541 588 aaKnown RBP17■□□□□ 0.31
CPSF7-205ENST00000439958 CUL4BQ13620 913 aa17■□□□□ 0.31
CPSF7-205ENST00000439958 GPC2Q8N158 579 aa17■□□□□ 0.31
CPSF7-205ENST00000439958 TEPSINQ96N21 525 aa17■□□□□ 0.31
CPSF7-205ENST00000439958 ZHX3Q9H4I2 956 aa17■□□□□ 0.31
CPSF7-205ENST00000439958 CHMP2AO43633 222 aa17■□□□□ 0.31
CPSF7-205ENST00000439958 RAD51AP2Q09MP3 1159 aa17■□□□□ 0.31
CPSF7-205ENST00000439958 ARL6IP4Q66PJ3 421 aaKnown RBP17■□□□□ 0.31
CPSF7-205ENST00000439958 DHX40Q8IX18 779 aaKnown RBP17■□□□□ 0.31
CPSF7-205ENST00000439958 SNX29Q8TEQ0 813 aa17■□□□□ 0.31
CPSF7-205ENST00000439958 RAVER2Q9HCJ3 691 aaKnown RBP17■□□□□ 0.31
CPSF7-205ENST00000439958 ADM5C9JUS6 153 aa16.99■□□□□ 0.31
CPSF7-205ENST00000439958 IDEP14735 1019 aa16.99■□□□□ 0.31
CPSF7-205ENST00000439958 PLCG1P19174 1290 aa16.99■□□□□ 0.31
CPSF7-205ENST00000439958 IQCB1Q15051 598 aa16.99■□□□□ 0.31
CPSF7-205ENST00000439958 CALML4Q96GE6 196 aa16.99■□□□□ 0.31
CPSF7-205ENST00000439958 RRAGDQ9NQL2 400 aaPredicted RBP16.99■□□□□ 0.31
CPSF7-205ENST00000439958 CLEC11AQ9Y240 323 aa16.99■□□□□ 0.31
CPSF7-205ENST00000439958 ATP1A3P13637 1013 aa16.99■□□□□ 0.31
CPSF7-205ENST00000439958 HIRAP54198 1017 aaPredicted RBP16.99■□□□□ 0.31
CPSF7-205ENST00000439958 DCPSQ96C86 337 aaKnown RBP16.99■□□□□ 0.31
CPSF7-205ENST00000439958 HOOK2Q96ED9 719 aa16.99■□□□□ 0.31
CPSF7-205ENST00000439958 NRBP1Q9UHY1 535 aa16.99■□□□□ 0.31
CPSF7-205ENST00000439958 ESYT2A0FGR8 921 aa16.99■□□□□ 0.31
CPSF7-205ENST00000439958 IFNKQ9P0W0 207 aa16.99■□□□□ 0.31
CPSF7-205ENST00000439958 DLEC1Q9Y238 1755 aa16.98■□□□□ 0.31
CPSF7-205ENST00000439958 NSMFQ6X4W1 530 aa16.98■□□□□ 0.31
CPSF7-205ENST00000439958 DYMQ7RTS9 669 aa16.98■□□□□ 0.31
CPSF7-205ENST00000439958 C4orf32Q8N8J7 132 aa16.98■□□□□ 0.31
CPSF7-205ENST00000439958 ZBED3Q96IU2 234 aaPredicted RBP16.98■□□□□ 0.31
CPSF7-205ENST00000439958 RAB34Q9BZG1 259 aa16.98■□□□□ 0.31
CPSF7-205ENST00000439958 DISC1Q9NRI5 854 aa16.98■□□□□ 0.31
CPSF7-205ENST00000439958 PCDHA12Q9UN75 941 aa16.98■□□□□ 0.31
CPSF7-205ENST00000439958 CAVIN2O95810 425 aa16.98■□□□□ 0.31
CPSF7-205ENST00000439958 STAT3P40763 770 aa16.98■□□□□ 0.31
CPSF7-205ENST00000439958 ARHGAP4P98171 946 aa16.98■□□□□ 0.31
CPSF7-205ENST00000439958 APOBEC3FQ8IUX4 373 aaKnown RBP16.98■□□□□ 0.31
CPSF7-205ENST00000439958 GOLGA6L6A8MZA4 724 aa16.97■□□□□ 0.31
CPSF7-205ENST00000439958 ASIC1P78348 528 aa16.97■□□□□ 0.31
CPSF7-205ENST00000439958 DPY19L2Q6NUT2 758 aa16.97■□□□□ 0.31
CPSF7-205ENST00000439958 C17orf53Q8N3J3 647 aaPredicted RBP16.97■□□□□ 0.31
CPSF7-205ENST00000439958 CYP2W1Q8TAV3 490 aa16.97■□□□□ 0.31
CPSF7-205ENST00000439958 PTGS1P23219 599 aa16.97■□□□□ 0.31
CPSF7-205ENST00000439958 KRT79Q5XKE5 535 aa16.97■□□□□ 0.31
CPSF7-205ENST00000439958 CCDC186Q7Z3E2 898 aa16.97■□□□□ 0.31
CPSF7-205ENST00000439958 KRT26Q7Z3Y9 468 aa16.97■□□□□ 0.31
CPSF7-205ENST00000439958 LDHDQ86WU2 507 aa16.97■□□□□ 0.31
CPSF7-205ENST00000439958 RPAP3Q9H6T3 665 aaPredicted RBP16.97■□□□□ 0.31
CPSF7-205ENST00000439958 FANCLQ9NW38 375 aa16.97■□□□□ 0.31
CPSF7-205ENST00000439958 LTBP3Q9NS15 1303 aa16.97■□□□□ 0.31
CPSF7-205ENST00000439958 SMTNL1A8MU46 457 aa16.97■□□□□ 0.31
CPSF7-205ENST00000439958 NCAPH2Q6IBW4 605 aa16.97■□□□□ 0.31
CPSF7-205ENST00000439958 PDLIM2Q96JY6 352 aa16.97■□□□□ 0.31
CPSF7-205ENST00000439958 FOCADQ5VW36 1801 aa16.97■□□□□ 0.31
CPSF7-205ENST00000439958 PHF20L1A8MW92 1017 aa16.96■□□□□ 0.31
CPSF7-205ENST00000439958 DDX39AO00148 427 aaKnown RBP16.96■□□□□ 0.31
CPSF7-205ENST00000439958 CTNND1O60716 968 aaKnown RBP16.96■□□□□ 0.31
CPSF7-205ENST00000439958 BMP6P22004 513 aa16.96■□□□□ 0.31
CPSF7-205ENST00000439958 ZNF75DP51815 510 aa16.96■□□□□ 0.31
CPSF7-205ENST00000439958 MYL5Q02045 173 aa16.96■□□□□ 0.31
CPSF7-205ENST00000439958 DNTTIP2Q5QJE6 756 aaKnown RBP16.96■□□□□ 0.31
CPSF7-205ENST00000439958 TBC1D12O60347 775 aa16.96■□□□□ 0.31
CPSF7-205ENST00000439958 CYP4A11Q02928 519 aa16.96■□□□□ 0.31
CPSF7-205ENST00000439958 PPP1R18Q6NYC8 613 aa16.96■□□□□ 0.31
CPSF7-205ENST00000439958 NFE2L3Q9Y4A8 694 aa16.96■□□□□ 0.31
CPSF7-205ENST00000439958 GCOM1H8Y6P7 765 aaPredicted RBP16.96■□□□□ 0.31
CPSF7-205ENST00000439958 MEIS2O14770 477 aa16.96■□□□□ 0.31
CPSF7-205ENST00000439958 POLR2MP0CAP2 368 aa16.96■□□□□ 0.31
CPSF7-205ENST00000439958 ZSCAN30Q86W11 494 aa16.96■□□□□ 0.31
CPSF7-205ENST00000439958 CTNND2Q9UQB3 1225 aa16.96■□□□□ 0.31
CPSF7-205ENST00000439958 VCAM1P19320 739 aa16.95■□□□□ 0.3
CPSF7-205ENST00000439958 CCT6AP40227 531 aaKnown RBP16.95■□□□□ 0.3
CPSF7-205ENST00000439958 MOB2Q70IA6 237 aa16.95■□□□□ 0.3
CPSF7-205ENST00000439958 SLF1Q9BQI6 1058 aa16.95■□□□□ 0.3
CPSF7-205ENST00000439958 TUBE1Q9UJT0 475 aa16.95■□□□□ 0.3
CPSF7-205ENST00000439958 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.95■□□□□ 0.31e-7■□□□□ 8.3
CPSF7-205ENST00000439958 GDAQ9Y2T3 454 aa16.95■□□□□ 0.3
CPSF7-205ENST00000439958 ECM2O94769 699 aaPredicted RBP16.95■□□□□ 0.3
CPSF7-205ENST00000439958 CNKSR2Q8WXI2 1034 aa16.95■□□□□ 0.3
CPSF7-205ENST00000439958 FEM1BQ9UK73 627 aa16.95■□□□□ 0.3
CPSF7-205ENST00000439958 MEIS1O00470 390 aa16.94■□□□□ 0.3
CPSF7-205ENST00000439958 LAD1O00515 517 aa16.94■□□□□ 0.3
CPSF7-205ENST00000439958 KRT18P05783 430 aaKnown RBP16.94■□□□□ 0.3
CPSF7-205ENST00000439958 FMR1Q06787 632 aaKnown RBP eCLIP16.94■□□□□ 0.3
CPSF7-205ENST00000439958 HPS3Q969F9 1004 aa16.94■□□□□ 0.3
CPSF7-205ENST00000439958 P2RX7Q99572 595 aaKnown RBP16.94■□□□□ 0.3
CPSF7-205ENST00000439958 NUDT12Q9BQG2 462 aa16.94■□□□□ 0.3
CPSF7-205ENST00000439958 XPO4Q9C0E2 1151 aaKnown RBP16.94■□□□□ 0.3
CPSF7-205ENST00000439958 POLD4Q9HCU8 107 aa16.94■□□□□ 0.3
CPSF7-205ENST00000439958 DACH1Q9UI36 760 aa16.94■□□□□ 0.3
CPSF7-205ENST00000439958 SMCHD1A6NHR9 2005 aa16.94■□□□□ 0.3
CPSF7-205ENST00000439958 FAM237AA0A1B0GTK4 181 aa16.94■□□□□ 0.3
CPSF7-205ENST00000439958 MDM2Q00987 491 aaPredicted RBP16.94■□□□□ 0.3
CPSF7-205ENST00000439958 CACNB1Q02641 598 aaPredicted RBP16.94■□□□□ 0.3
CPSF7-205ENST00000439958 MCM6Q14566 821 aa16.94■□□□□ 0.3
CPSF7-205ENST00000439958 SUPT20HL1Q3ZLR7 823 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms