RNA–Protein interactions for RNA: ENST00000439518.5

NCKIPSD-206, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 1 (best)

Gene NCKIPSD, Length 1,214 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-206ENST00000439518 DEFB123Q8N688 67 aa23.76■■□□□ 1.39
NCKIPSD-206ENST00000439518 RGS22Q8NE09 1264 aa23.76■■□□□ 1.39
NCKIPSD-206ENST00000439518 AP5M1Q9H0R1 490 aa23.76■■□□□ 1.39
NCKIPSD-206ENST00000439518 A0A0U1RQG5 324 aaPredicted RBP23.75■■□□□ 1.39
NCKIPSD-206ENST00000439518 ARVCFO00192 962 aa23.75■■□□□ 1.39
NCKIPSD-206ENST00000439518 DYNC1LI2O43237 492 aaPredicted RBP23.75■■□□□ 1.39
NCKIPSD-206ENST00000439518 RAG1P15918 1043 aa23.75■■□□□ 1.39
NCKIPSD-206ENST00000439518 CDC37Q16543 378 aaPredicted RBP23.75■■□□□ 1.39
NCKIPSD-206ENST00000439518 FSCN1Q16658 493 aaKnown RBP23.75■■□□□ 1.39
NCKIPSD-206ENST00000439518 Q7L0L9 218 aa23.75■■□□□ 1.39
NCKIPSD-206ENST00000439518 CYB5R4Q7L1T6 521 aa23.75■■□□□ 1.39
NCKIPSD-206ENST00000439518 TBX21Q9UL17 535 aa23.75■■□□□ 1.39
NCKIPSD-206ENST00000439518 MROH7Q68CQ1 1323 aa23.75■■□□□ 1.39
NCKIPSD-206ENST00000439518 SGSM2O43147 1006 aa23.74■■□□□ 1.39
NCKIPSD-206ENST00000439518 CYP21A2P08686 494 aa23.74■■□□□ 1.39
NCKIPSD-206ENST00000439518 EDNRBP24530 442 aa23.74■■□□□ 1.39
NCKIPSD-206ENST00000439518 USH1GQ495M9 461 aa23.74■■□□□ 1.39
NCKIPSD-206ENST00000439518 KIAA1211Q6ZU35 1233 aa23.74■■□□□ 1.39
NCKIPSD-206ENST00000439518 VTI1AQ96AJ9 217 aa23.74■■□□□ 1.39
NCKIPSD-206ENST00000439518 MAF1Q9H063 256 aa23.74■■□□□ 1.39
NCKIPSD-206ENST00000439518 U3KPZ7 1027 aaPredicted RBP23.74■■□□□ 1.39
NCKIPSD-206ENST00000439518 RBM47A0AV96 593 aaKnown RBP23.73■■□□□ 1.39
NCKIPSD-206ENST00000439518 CABYRO75952 493 aa23.73■■□□□ 1.39
NCKIPSD-206ENST00000439518 PARP1P09874 1014 aaKnown RBP23.73■■□□□ 1.39
NCKIPSD-206ENST00000439518 EPHB4P54760 987 aa23.73■■□□□ 1.39
NCKIPSD-206ENST00000439518 DUSP28Q4G0W2 176 aa23.73■■□□□ 1.39
NCKIPSD-206ENST00000439518 IFIT1BQ5T764 474 aaKnown RBP23.73■■□□□ 1.39
NCKIPSD-206ENST00000439518 CXCL17Q6UXB2 119 aa23.73■■□□□ 1.39
NCKIPSD-206ENST00000439518 SLC43A3Q8NBI5 491 aa23.73■■□□□ 1.39
NCKIPSD-206ENST00000439518 DNERQ8NFT8 737 aa23.73■■□□□ 1.39
NCKIPSD-206ENST00000439518 FAM126BQ8IXS8 530 aa23.72■■□□□ 1.39
NCKIPSD-206ENST00000439518 WDR11Q9BZH6 1224 aa23.72■■□□□ 1.39
NCKIPSD-206ENST00000439518 JMJD4Q9H9V9 463 aa23.72■■□□□ 1.39
NCKIPSD-206ENST00000439518 MTMR10Q9NXD2 777 aa23.72■■□□□ 1.39
NCKIPSD-206ENST00000439518 TAF6LQ9Y6J9 622 aa23.72■■□□□ 1.39
NCKIPSD-206ENST00000439518 ABCB11O95342 1321 aa23.71■■□□□ 1.39
NCKIPSD-206ENST00000439518 TIMP1P01033 207 aa23.71■■□□□ 1.39
NCKIPSD-206ENST00000439518 TRDNQ13061 729 aa23.71■■□□□ 1.39
NCKIPSD-206ENST00000439518 QRICH1Q2TAL8 776 aa23.71■■□□□ 1.39
NCKIPSD-206ENST00000439518 FAM109BQ6ICB4 259 aaPredicted RBP23.71■■□□□ 1.39
NCKIPSD-206ENST00000439518 STAG2Q8N3U4 1231 aa23.71■■□□□ 1.39
NCKIPSD-206ENST00000439518 COL6A3P12111 3177 aa23.71■■□□□ 1.39
NCKIPSD-206ENST00000439518 GRIN2DO15399 1336 aa23.7■■□□□ 1.38
NCKIPSD-206ENST00000439518 ZEB2O60315 1214 aa23.7■■□□□ 1.38
NCKIPSD-206ENST00000439518 CD4P01730 458 aa23.7■■□□□ 1.38
NCKIPSD-206ENST00000439518 FPGSQ05932 587 aa23.7■■□□□ 1.38
NCKIPSD-206ENST00000439518 PDE4DQ08499 809 aa23.7■■□□□ 1.38
NCKIPSD-206ENST00000439518 TBC1D5Q92609 795 aa23.7■■□□□ 1.38
NCKIPSD-206ENST00000439518 MAP4K1Q92918 833 aa23.7■■□□□ 1.38
NCKIPSD-206ENST00000439518 FBXO11Q86XK2 927 aa23.69■■□□□ 1.38
NCKIPSD-206ENST00000439518 MPHOSPH6Q99547 160 aaKnown RBP23.69■■□□□ 1.38
NCKIPSD-206ENST00000439518 VAT1LQ9HCJ6 419 aa23.69■■□□□ 1.38
NCKIPSD-206ENST00000439518 MAD2L2Q9UI95 211 aa23.69■■□□□ 1.38
NCKIPSD-206ENST00000439518 PALM3A6NDB9 673 aaPredicted RBP23.68■■□□□ 1.38
NCKIPSD-206ENST00000439518 KLRF2D3W0D1 207 aa23.68■■□□□ 1.38
NCKIPSD-206ENST00000439518 E7EWF7 191 aa23.68■■□□□ 1.38
NCKIPSD-206ENST00000439518 ITGA7Q13683 1181 aa23.68■■□□□ 1.38
NCKIPSD-206ENST00000439518 MFSD5Q6N075 450 aa23.68■■□□□ 1.38
NCKIPSD-206ENST00000439518 SYTL5Q8TDW5 730 aaPredicted RBP23.68■■□□□ 1.38
NCKIPSD-206ENST00000439518 MTMR8Q96EF0 704 aa23.68■■□□□ 1.38
NCKIPSD-206ENST00000439518 SEZ6LQ9BYH1 1024 aa23.68■■□□□ 1.38
NCKIPSD-206ENST00000439518 COL20A1Q9P218 1284 aa23.68■■□□□ 1.38
NCKIPSD-206ENST00000439518 B4DLN1 442 aa23.67■■□□□ 1.38
NCKIPSD-206ENST00000439518 TLR3O15455 904 aaKnown RBP23.67■■□□□ 1.38
NCKIPSD-206ENST00000439518 DHX16O60231 1041 aaKnown RBP23.67■■□□□ 1.38
NCKIPSD-206ENST00000439518 MRPL12P52815 198 aaKnown RBP23.67■■□□□ 1.38
NCKIPSD-206ENST00000439518 STOX1Q6ZVD7 989 aa23.67■■□□□ 1.38
NCKIPSD-206ENST00000439518 MCF2L2Q86YR7 1114 aa23.67■■□□□ 1.38
NCKIPSD-206ENST00000439518 SCFD2Q8WU76 684 aa23.67■■□□□ 1.38
NCKIPSD-206ENST00000439518 MRPL11Q9Y3B7 192 aaKnown RBP23.67■■□□□ 1.38
NCKIPSD-206ENST00000439518 IFIT3O14879 490 aaKnown RBP23.66■■□□□ 1.38
NCKIPSD-206ENST00000439518 SMAD3P84022 425 aaKnown RBP23.66■■□□□ 1.38
NCKIPSD-206ENST00000439518 RALYLQ86SE5 291 aaKnown RBP23.66■■□□□ 1.38
NCKIPSD-206ENST00000439518 TAAR1Q96RJ0 339 aa23.66■■□□□ 1.38
NCKIPSD-206ENST00000439518 SENP2Q9HC62 589 aa23.66■■□□□ 1.38
NCKIPSD-206ENST00000439518 OPLAHO14841 1288 aa23.65■■□□□ 1.38
NCKIPSD-206ENST00000439518 NKRFO15226 690 aaKnown RBP eCLIP23.65■■□□□ 1.38
NCKIPSD-206ENST00000439518 PPP1R11O60927 126 aaPredicted RBP23.65■■□□□ 1.38
NCKIPSD-206ENST00000439518 PSMC6P62333 389 aa23.65■■□□□ 1.38
NCKIPSD-206ENST00000439518 PPP2R5BQ15173 497 aa23.65■■□□□ 1.38
NCKIPSD-206ENST00000439518 SLC35G1Q2M3R5 365 aa23.65■■□□□ 1.38
NCKIPSD-206ENST00000439518 OR6J1Q8NGC5 347 aa23.65■■□□□ 1.38
NCKIPSD-206ENST00000439518 NCOA7Q8NI08 942 aa23.65■■□□□ 1.38
NCKIPSD-206ENST00000439518 NSUN6Q8TEA1 469 aaKnown RBP23.65■■□□□ 1.38
NCKIPSD-206ENST00000439518 RNPC3Q96LT9 517 aaKnown RBP23.65■■□□□ 1.38
NCKIPSD-206ENST00000439518 AMNQ9BXJ7 453 aa23.65■■□□□ 1.38
NCKIPSD-206ENST00000439518 POLR3EQ9NVU0 708 aa23.65■■□□□ 1.38
NCKIPSD-206ENST00000439518 STXBP5LQ9Y2K9 1186 aa23.65■■□□□ 1.38
NCKIPSD-206ENST00000439518 RBM8AQ9Y5S9 174 aaKnown RBP23.65■■□□□ 1.38
NCKIPSD-206ENST00000439518 CPT1AP50416 773 aa23.64■■□□□ 1.37
NCKIPSD-206ENST00000439518 ANTXR2P58335 489 aa23.64■■□□□ 1.37
NCKIPSD-206ENST00000439518 PURAQ00577 322 aaKnown RBP23.64■■□□□ 1.37
NCKIPSD-206ENST00000439518 GHRHRQ02643 423 aa23.64■■□□□ 1.37
NCKIPSD-206ENST00000439518 TROAPQ12815 778 aa23.64■■□□□ 1.37
NCKIPSD-206ENST00000439518 GRM4Q14833 912 aa23.64■■□□□ 1.37
NCKIPSD-206ENST00000439518 C16orf59Q7L2K0 433 aa23.64■■□□□ 1.37
NCKIPSD-206ENST00000439518 TRPV6Q9H1D0 765 aa23.64■■□□□ 1.37
NCKIPSD-206ENST00000439518 MYH6P13533 1939 aa23.63■■□□□ 1.37
NCKIPSD-206ENST00000439518 A6NJR5 290 aa23.63■■□□□ 1.37
NCKIPSD-206ENST00000439518 ZBTB5O15062 677 aa23.63■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms