RNA–Protein interactions for RNA: ENST00000439338.5

UBE2F-212, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

TSL 5

Gene UBE2F, Length 873 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-212ENST00000439338 PWP2Q15269 919 aaKnown RBP23.8■■□□□ 1.4
UBE2F-212ENST00000439338 RAB11FIP4Q86YS3 637 aa23.8■■□□□ 1.4
UBE2F-212ENST00000439338 FERMT2Q96AC1 680 aa23.8■■□□□ 1.4
UBE2F-212ENST00000439338 TCEANC2Q96MN5 208 aa23.8■■□□□ 1.4
UBE2F-212ENST00000439338 VTA1Q9NP79 307 aa23.8■■□□□ 1.4
UBE2F-212ENST00000439338 ZMYND8Q9ULU4 1186 aaPredicted RBP23.8■■□□□ 1.4
UBE2F-212ENST00000439338 MYADML2A6NDP7 307 aa23.79■■□□□ 1.4
UBE2F-212ENST00000439338 RXRAP19793 462 aa23.79■■□□□ 1.4
UBE2F-212ENST00000439338 MCF2L2Q86YR7 1114 aa23.79■■□□□ 1.4
UBE2F-212ENST00000439338 DNERQ8NFT8 737 aa23.79■■□□□ 1.4
UBE2F-212ENST00000439338 SYTL5Q8TDW5 730 aaPredicted RBP23.79■■□□□ 1.4
UBE2F-212ENST00000439338 PDGFCQ9NRA1 345 aa23.79■■□□□ 1.4
UBE2F-212ENST00000439338 PHF24Q9UPV7 400 aa23.79■■□□□ 1.4
UBE2F-212ENST00000439338 REC8O95072 547 aa23.78■■□□□ 1.4
UBE2F-212ENST00000439338 KIF5BP33176 963 aa23.78■■□□□ 1.4
UBE2F-212ENST00000439338 HSPA4P34932 840 aa23.78■■□□□ 1.4
UBE2F-212ENST00000439338 IRX5P78411 483 aaPredicted RBP23.78■■□□□ 1.4
UBE2F-212ENST00000439338 TNFAIP2Q03169 654 aa23.78■■□□□ 1.4
UBE2F-212ENST00000439338 TAPT1Q6NXT6 567 aa23.78■■□□□ 1.4
UBE2F-212ENST00000439338 DHX32Q7L7V1 743 aaKnown RBP23.78■■□□□ 1.4
UBE2F-212ENST00000439338 KLHDC9Q8NEP7 349 aa23.78■■□□□ 1.4
UBE2F-212ENST00000439338 PIBF1Q8WXW3 757 aa23.78■■□□□ 1.4
UBE2F-212ENST00000439338 KCNB2Q92953 911 aa23.78■■□□□ 1.4
UBE2F-212ENST00000439338 MAF1Q9H063 256 aa23.78■■□□□ 1.4
UBE2F-212ENST00000439338 UPF3AQ9H1J1 476 aaKnown RBP23.78■■□□□ 1.4
UBE2F-212ENST00000439338 COL20A1Q9P218 1284 aa23.78■■□□□ 1.4
UBE2F-212ENST00000439338 PCDHA1Q9Y5I3 950 aa23.78■■□□□ 1.4
UBE2F-212ENST00000439338 SLC12A7Q9Y666 1083 aa23.78■■□□□ 1.4
UBE2F-212ENST00000439338 DNAH12Q6ZR08 3092 aa23.78■■□□□ 1.4
UBE2F-212ENST00000439338 OPLAHO14841 1288 aa23.77■■□□□ 1.4
UBE2F-212ENST00000439338 C6orf222P0C671 652 aaPredicted RBP23.77■■□□□ 1.4
UBE2F-212ENST00000439338 EDNRBP24530 442 aa23.77■■□□□ 1.4
UBE2F-212ENST00000439338 GJA9P57773 515 aa23.77■■□□□ 1.4
UBE2F-212ENST00000439338 RTP1P59025 263 aa23.77■■□□□ 1.4
UBE2F-212ENST00000439338 EXOSC10Q01780 885 aaKnown RBP23.77■■□□□ 1.4
UBE2F-212ENST00000439338 CHRDL2Q6WN34 429 aa23.77■■□□□ 1.4
UBE2F-212ENST00000439338 NOL8Q76FK4 1167 aaKnown RBP23.77■■□□□ 1.4
UBE2F-212ENST00000439338 SGMS1Q86VZ5 419 aa23.77■■□□□ 1.4
UBE2F-212ENST00000439338 SPC25Q9HBM1 224 aa23.77■■□□□ 1.4
UBE2F-212ENST00000439338 PNMA6FA0A0J9YX94 578 aa23.76■■□□□ 1.39
UBE2F-212ENST00000439338 PLEKHA8P1O95397 391 aa23.76■■□□□ 1.39
UBE2F-212ENST00000439338 CFBP00751 764 aa23.76■■□□□ 1.39
UBE2F-212ENST00000439338 CALM1P0DP23 149 aa23.76■■□□□ 1.39
UBE2F-212ENST00000439338 CALM2P0DP24 149 aa23.76■■□□□ 1.39
UBE2F-212ENST00000439338 CALM3P0DP25 149 aa23.76■■□□□ 1.39
UBE2F-212ENST00000439338 SMPD1P17405 629 aa23.76■■□□□ 1.39
UBE2F-212ENST00000439338 SYN1P17600 705 aa23.76■■□□□ 1.39
UBE2F-212ENST00000439338 PTGS1P23219 599 aa23.76■■□□□ 1.39
UBE2F-212ENST00000439338 PDE4DQ08499 809 aa23.76■■□□□ 1.39
UBE2F-212ENST00000439338 SLC39A5Q6ZMH5 540 aa23.76■■□□□ 1.39
UBE2F-212ENST00000439338 MICU3Q86XE3 530 aa23.76■■□□□ 1.39
UBE2F-212ENST00000439338 TAAR1Q96RJ0 339 aa23.76■■□□□ 1.39
UBE2F-212ENST00000439338 MPHOSPH6Q99547 160 aaKnown RBP23.76■■□□□ 1.39
UBE2F-212ENST00000439338 TSEN34Q9BSV6 310 aaKnown RBP23.76■■□□□ 1.39
UBE2F-212ENST00000439338 SPZ1Q9BXG8 430 aa23.76■■□□□ 1.39
UBE2F-212ENST00000439338 COLQQ9Y215 455 aaPredicted RBP23.76■■□□□ 1.39
UBE2F-212ENST00000439338 GNEQ9Y223 722 aaKnown RBP23.76■■□□□ 1.39
UBE2F-212ENST00000439338 SNX14Q9Y5W7 946 aa23.76■■□□□ 1.39
UBE2F-212ENST00000439338 A0A1W2PQ45 241 aaPredicted RBP23.75■■□□□ 1.39
UBE2F-212ENST00000439338 A0A1W2PQY0 241 aa23.75■■□□□ 1.39
UBE2F-212ENST00000439338 CST5P28325 142 aaPredicted RBP23.75■■□□□ 1.39
UBE2F-212ENST00000439338 GNAQP50148 359 aa23.75■■□□□ 1.39
UBE2F-212ENST00000439338 KCNA10Q16322 511 aa23.75■■□□□ 1.39
UBE2F-212ENST00000439338 TMEM63BQ5T3F8 832 aa23.75■■□□□ 1.39
UBE2F-212ENST00000439338 IQSEC1Q6DN90 963 aa23.75■■□□□ 1.39
UBE2F-212ENST00000439338 CCSAPQ6IQ19 270 aaPredicted RBP23.75■■□□□ 1.39
UBE2F-212ENST00000439338 TLK2Q86UE8 772 aa23.75■■□□□ 1.39
UBE2F-212ENST00000439338 LZTS2Q9BRK4 669 aa23.75■■□□□ 1.39
UBE2F-212ENST00000439338 ATP11BQ9Y2G3 1177 aa23.75■■□□□ 1.39
UBE2F-212ENST00000439338 MOXD2PA6NHM9 499 aa23.74■■□□□ 1.39
UBE2F-212ENST00000439338 CPA1P15085 419 aa23.74■■□□□ 1.39
UBE2F-212ENST00000439338 HSD17B4P51659 736 aa23.74■■□□□ 1.39
UBE2F-212ENST00000439338 ACLYP53396 1101 aa23.74■■□□□ 1.39
UBE2F-212ENST00000439338 SNX17Q15036 470 aa23.74■■□□□ 1.39
UBE2F-212ENST00000439338 SRBD1Q8N5C6 995 aaKnown RBP23.74■■□□□ 1.39
UBE2F-212ENST00000439338 JAKMIP1Q96N16 626 aaKnown RBP23.74■■□□□ 1.39
UBE2F-212ENST00000439338 PCDH10Q9P2E7 1040 aa23.74■■□□□ 1.39
UBE2F-212ENST00000439338 B4DLN1 442 aa23.73■■□□□ 1.39
UBE2F-212ENST00000439338 CTAGE5O15320 804 aa23.73■■□□□ 1.39
UBE2F-212ENST00000439338 HMGB1P09429 215 aaKnown RBP23.73■■□□□ 1.39
UBE2F-212ENST00000439338 SMARCA1P28370 1054 aa23.73■■□□□ 1.39
UBE2F-212ENST00000439338 MRPL12P52815 198 aaKnown RBP23.73■■□□□ 1.39
UBE2F-212ENST00000439338 BEX3Q00994 111 aa23.73■■□□□ 1.39
UBE2F-212ENST00000439338 GHRHRQ02643 423 aa23.73■■□□□ 1.39
UBE2F-212ENST00000439338 TRAF1Q13077 416 aa23.73■■□□□ 1.39
UBE2F-212ENST00000439338 TRIM60Q495X7 471 aa23.73■■□□□ 1.39
UBE2F-212ENST00000439338 APOA5Q6Q788 366 aa23.73■■□□□ 1.39
UBE2F-212ENST00000439338 SYNE3Q6ZMZ3 975 aa23.73■■□□□ 1.39
UBE2F-212ENST00000439338 CMTR1Q8N1G2 835 aaKnown RBP23.73■■□□□ 1.39
UBE2F-212ENST00000439338 NSUN6Q8TEA1 469 aaKnown RBP23.73■■□□□ 1.39
UBE2F-212ENST00000439338 RRP36Q96EU6 259 aaKnown RBP23.73■■□□□ 1.39
UBE2F-212ENST00000439338 RMDN3Q96TC7 470 aa23.73■■□□□ 1.39
UBE2F-212ENST00000439338 RBM47A0AV96 593 aaKnown RBP23.72■■□□□ 1.39
UBE2F-212ENST00000439338 DYNC1LI2O43237 492 aaPredicted RBP23.72■■□□□ 1.39
UBE2F-212ENST00000439338 GNASQ5JWF2 1037 aa23.72■■□□□ 1.39
UBE2F-212ENST00000439338 TMTC3Q6ZXV5 915 aa23.72■■□□□ 1.39
UBE2F-212ENST00000439338 FANCBQ8NB91 859 aa23.72■■□□□ 1.39
UBE2F-212ENST00000439338 PCSK9Q8NBP7 692 aaKnown RBP23.72■■□□□ 1.39
UBE2F-212ENST00000439338 WDR11Q9BZH6 1224 aa23.72■■□□□ 1.39
UBE2F-212ENST00000439338 AP5M1Q9H0R1 490 aa23.72■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms