RNA–Protein interactions for RNA: ENST00000439235.5

CHD3-204, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,263 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-204ENST00000439235 MOV10L1Q9BXT6 1211 aaKnown RBP23.68■■□□□ 1.38
CHD3-204ENST00000439235 TXNRD2Q9NNW7 524 aa23.68■■□□□ 1.38
CHD3-204ENST00000439235 BIN2Q9UBW5 565 aaPredicted RBP23.68■■□□□ 1.38
CHD3-204ENST00000439235 RIPK3Q9Y572 518 aa23.68■■□□□ 1.38
CHD3-204ENST00000439235 AOC2O75106 756 aa23.67■■□□□ 1.38
CHD3-204ENST00000439235 FOSP01100 380 aaPredicted RBP23.67■■□□□ 1.38
CHD3-204ENST00000439235 NONOQ15233 471 aaKnown RBP eCLIP23.67■■□□□ 1.38
CHD3-204ENST00000439235 RILPL1Q5EBL4 403 aa23.67■■□□□ 1.38
CHD3-204ENST00000439235 JAKMIP3Q5VZ66 844 aa23.67■■□□□ 1.38
CHD3-204ENST00000439235 USP17L6PQ6QN14 398 aa23.67■■□□□ 1.38
CHD3-204ENST00000439235 PIK3AP1Q6ZUJ8 805 aa23.67■■□□□ 1.38
CHD3-204ENST00000439235 ANKRD13CQ8N6S4 541 aa23.67■■□□□ 1.38
CHD3-204ENST00000439235 SHCBP1Q8NEM2 672 aa23.67■■□□□ 1.38
CHD3-204ENST00000439235 ZIC5Q96T25 663 aa23.67■■□□□ 1.38
CHD3-204ENST00000439235 ZFYVE28Q9HCC9 887 aa23.67■■□□□ 1.38
CHD3-204ENST00000439235 ADGRA2Q96PE1 1338 aa23.66■■□□□ 1.38
CHD3-204ENST00000439235 SPDYE3A6NKU9 549 aa23.66■■□□□ 1.38
CHD3-204ENST00000439235 ADAMTS3O15072 1205 aa23.66■■□□□ 1.38
CHD3-204ENST00000439235 MAP2K2P36507 400 aa23.66■■□□□ 1.38
CHD3-204ENST00000439235 HSD17B4P51659 736 aa23.66■■□□□ 1.38
CHD3-204ENST00000439235 FAM110CQ1W6H9 321 aa23.66■■□□□ 1.38
CHD3-204ENST00000439235 ATL3Q6DD88 541 aa23.66■■□□□ 1.38
CHD3-204ENST00000439235 NCAPG2Q86XI2 1143 aa23.66■■□□□ 1.38
CHD3-204ENST00000439235 GBP4Q96PP9 640 aa23.66■■□□□ 1.38
CHD3-204ENST00000439235 MROH8Q9H579 483 aa23.66■■□□□ 1.38
CHD3-204ENST00000439235 EHMT1Q9H9B1 1298 aa23.66■■□□□ 1.38
CHD3-204ENST00000439235 TMEM260Q9NX78 707 aa23.66■■□□□ 1.38
CHD3-204ENST00000439235 RBBP6Q7Z6E9 1792 aaKnown RBP23.65■■□□□ 1.38
CHD3-204ENST00000439235 PEX10O60683 326 aa23.65■■□□□ 1.38
CHD3-204ENST00000439235 TRAPPC10P48553 1259 aa23.65■■□□□ 1.38
CHD3-204ENST00000439235 NSMFQ6X4W1 530 aa23.65■■□□□ 1.38
CHD3-204ENST00000439235 ERCC3P19447 782 aa23.64■■□□□ 1.37
CHD3-204ENST00000439235 HOXA13P31271 388 aaPredicted RBP23.64■■□□□ 1.37
CHD3-204ENST00000439235 KRT85P78386 507 aa23.64■■□□□ 1.37
CHD3-204ENST00000439235 FOXD4L6Q3SYB3 417 aaPredicted RBP23.64■■□□□ 1.37
CHD3-204ENST00000439235 FAM173BQ6P4H8 233 aa23.64■■□□□ 1.37
CHD3-204ENST00000439235 FOXD4L3Q6VB84 417 aaPredicted RBP23.64■■□□□ 1.37
CHD3-204ENST00000439235 RNF207Q6ZRF8 634 aa23.64■■□□□ 1.37
CHD3-204ENST00000439235 DHX30Q7L2E3 1194 aaKnown RBP eCLIP23.64■■□□□ 1.37
CHD3-204ENST00000439235 ANO3Q9BYT9 981 aa23.64■■□□□ 1.37
CHD3-204ENST00000439235 PFASO15067 1338 aa23.63■■□□□ 1.37
CHD3-204ENST00000439235 FAM205CA6NFA0 338 aa23.63■■□□□ 1.37
CHD3-204ENST00000439235 CA12O43570 354 aa23.63■■□□□ 1.37
CHD3-204ENST00000439235 TLR2O60603 784 aa23.63■■□□□ 1.37
CHD3-204ENST00000439235 VEGFBP49765 207 aa23.63■■□□□ 1.37
CHD3-204ENST00000439235 DNM1Q05193 864 aaKnown RBP23.63■■□□□ 1.37
CHD3-204ENST00000439235 Q3C1V9 767 aa23.63■■□□□ 1.37
CHD3-204ENST00000439235 EARS2Q5JPH6 523 aaKnown RBP23.63■■□□□ 1.37
CHD3-204ENST00000439235 CLEC17AQ6ZS10 378 aa23.63■■□□□ 1.37
CHD3-204ENST00000439235 CCAR1Q8IX12 1150 aaKnown RBP23.63■■□□□ 1.37
CHD3-204ENST00000439235 TBC1D5Q92609 795 aa23.63■■□□□ 1.37
CHD3-204ENST00000439235 CFAP45Q9UL16 551 aa23.63■■□□□ 1.37
CHD3-204ENST00000439235 THSD7BQ9C0I4 1608 aa23.62■■□□□ 1.37
CHD3-204ENST00000439235 NCLP19338 710 aaKnown RBP23.62■■□□□ 1.37
CHD3-204ENST00000439235 RPS6P62753 249 aaKnown RBP23.62■■□□□ 1.37
CHD3-204ENST00000439235 NOM1Q5C9Z4 860 aaKnown RBP23.62■■□□□ 1.37
CHD3-204ENST00000439235 SLC30A10Q6XR72 485 aa23.62■■□□□ 1.37
CHD3-204ENST00000439235 FCHSD1Q86WN1 690 aa23.62■■□□□ 1.37
CHD3-204ENST00000439235 TBCKQ8TEA7 893 aa23.62■■□□□ 1.37
CHD3-204ENST00000439235 A1CFQ9NQ94 594 aaKnown RBP23.62■■□□□ 1.37
CHD3-204ENST00000439235 CPA4Q9UI42 421 aa23.62■■□□□ 1.37
CHD3-204ENST00000439235 BAG4O95429 457 aaKnown RBP23.61■■□□□ 1.37
CHD3-204ENST00000439235 BCRP11274 1271 aa23.61■■□□□ 1.37
CHD3-204ENST00000439235 CRHR2Q13324 411 aa23.61■■□□□ 1.37
CHD3-204ENST00000439235 BAATQ14032 418 aaPredicted RBP23.61■■□□□ 1.37
CHD3-204ENST00000439235 INF2Q27J81 1249 aa23.61■■□□□ 1.37
CHD3-204ENST00000439235 NEK8Q86SG6 692 aa23.61■■□□□ 1.37
CHD3-204ENST00000439235 ANKRD35Q8N283 1001 aa23.61■■□□□ 1.37
CHD3-204ENST00000439235 SYTL5Q8TDW5 730 aaPredicted RBP23.61■■□□□ 1.37
CHD3-204ENST00000439235 PGBD1Q96JS3 809 aa23.61■■□□□ 1.37
CHD3-204ENST00000439235 CYP39A1Q9NYL5 469 aa23.61■■□□□ 1.37
CHD3-204ENST00000439235 KCTD2Q14681 263 aa23.6■■□□□ 1.37
CHD3-204ENST00000439235 TTC38Q5R3I4 469 aa23.6■■□□□ 1.37
CHD3-204ENST00000439235 WDR78Q5VTH9 848 aa23.6■■□□□ 1.37
CHD3-204ENST00000439235 C17orf99Q6UX52 265 aa23.6■■□□□ 1.37
CHD3-204ENST00000439235 NAP1L4Q99733 375 aaKnown RBP23.6■■□□□ 1.37
CHD3-204ENST00000439235 MAPK4P31152 587 aa23.59■■□□□ 1.37
CHD3-204ENST00000439235 SREBF1P36956 1147 aa23.59■■□□□ 1.37
CHD3-204ENST00000439235 USP28Q96RU2 1077 aa23.59■■□□□ 1.37
CHD3-204ENST00000439235 MMP19Q99542 508 aa23.59■■□□□ 1.37
CHD3-204ENST00000439235 PORCNQ9H237 461 aa23.59■■□□□ 1.37
CHD3-204ENST00000439235 EFCC1Q9HA90 598 aa23.59■■□□□ 1.37
CHD3-204ENST00000439235 POLR3EQ9NVU0 708 aa23.59■■□□□ 1.37
CHD3-204ENST00000439235 CEP131Q9UPN4 1083 aa23.59■■□□□ 1.37
CHD3-204ENST00000439235 MYH15Q9Y2K3 1946 aa23.59■■□□□ 1.37
CHD3-204ENST00000439235 BMP15O95972 392 aa23.58■■□□□ 1.37
CHD3-204ENST00000439235 FCER1AP12319 257 aa23.58■■□□□ 1.37
CHD3-204ENST00000439235 ATP2B1P20020 1258 aa23.58■■□□□ 1.37
CHD3-204ENST00000439235 TOB1P50616 345 aaPredicted RBP23.58■■□□□ 1.37
CHD3-204ENST00000439235 ORC2Q13416 577 aaPredicted RBP23.58■■□□□ 1.37
CHD3-204ENST00000439235 CSPP1Q1MSJ5 1256 aa23.58■■□□□ 1.37
CHD3-204ENST00000439235 ANO1Q5XXA6 986 aa23.58■■□□□ 1.37
CHD3-204ENST00000439235 SCAND2PQ9GZW5 306 aaPredicted RBP23.58■■□□□ 1.37
CHD3-204ENST00000439235 RTEL1Q9NZ71 1219 aa23.58■■□□□ 1.37
CHD3-204ENST00000439235 COL20A1Q9P218 1284 aa23.58■■□□□ 1.37
CHD3-204ENST00000439235 IVNS1ABPQ9Y6Y0 642 aa23.58■■□□□ 1.37
CHD3-204ENST00000439235 YEATS4O95619 227 aa23.57■■□□□ 1.36
CHD3-204ENST00000439235 ARHGAP4P98171 946 aa23.57■■□□□ 1.36
CHD3-204ENST00000439235 LETM2Q2VYF4 491 aa23.57■■□□□ 1.36
CHD3-204ENST00000439235 ABRAQ8N0Z2 381 aa23.57■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms