RNA–Protein interactions for RNA: ENST00000439176.5

ERCC8-203, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 5

Gene ERCC8, Length 684 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-203ENST00000439176 PLIN4Q96Q06 1357 aa8.04□□□□□ -1.12
ERCC8-203ENST00000439176 DNAJC25-GNG10A0A024R161 153 aa8.03□□□□□ -1.12
ERCC8-203ENST00000439176 ASB14A6NK59 587 aa8.03□□□□□ -1.12
ERCC8-203ENST00000439176 DLL1O00548 723 aa8.03□□□□□ -1.12
ERCC8-203ENST00000439176 RANBP6O60518 1105 aaKnown RBP8.03□□□□□ -1.12
ERCC8-203ENST00000439176 SNAI1O95863 264 aaPredicted RBP8.03□□□□□ -1.12
ERCC8-203ENST00000439176 C6orf222P0C671 652 aaPredicted RBP8.03□□□□□ -1.12
ERCC8-203ENST00000439176 TAL1P17542 331 aaPredicted RBP8.03□□□□□ -1.12
ERCC8-203ENST00000439176 MCCP23508 829 aa8.03□□□□□ -1.12
ERCC8-203ENST00000439176 ACLYP53396 1101 aa8.03□□□□□ -1.12
ERCC8-203ENST00000439176 RRP1P56182 461 aaKnown RBP8.03□□□□□ -1.12
ERCC8-203ENST00000439176 AAMPQ13685 434 aa8.03□□□□□ -1.12
ERCC8-203ENST00000439176 RCSD1Q6JBY9 416 aa8.03□□□□□ -1.12
ERCC8-203ENST00000439176 NOL8Q76FK4 1167 aaKnown RBP8.03□□□□□ -1.12
ERCC8-203ENST00000439176 METTL3Q86U44 580 aaKnown RBP8.03□□□□□ -1.12
ERCC8-203ENST00000439176 GMCL1Q96IK5 515 aa8.03□□□□□ -1.12
ERCC8-203ENST00000439176 PDLIM7Q9NR12 457 aa8.03□□□□□ -1.12
ERCC8-203ENST00000439176 HELLSQ9NRZ9 838 aa8.03□□□□□ -1.12
ERCC8-203ENST00000439176 TOMM22Q9NS69 142 aa8.03□□□□□ -1.12
ERCC8-203ENST00000439176 HOMER2Q9NSB8 354 aa8.03□□□□□ -1.12
ERCC8-203ENST00000439176 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.03□□□□□ -1.12
ERCC8-203ENST00000439176 PNMA2Q9UL42 364 aa8.03□□□□□ -1.12
ERCC8-203ENST00000439176 COL11A1P12107 1806 aaPredicted RBP8.03□□□□□ -1.12
ERCC8-203ENST00000439176 ELP1O95163 1332 aa8.03□□□□□ -1.12
ERCC8-203ENST00000439176 SYNRGQ9UMZ2 1314 aa8.03□□□□□ -1.12
ERCC8-203ENST00000439176 SMCHD1A6NHR9 2005 aa8.02□□□□□ -1.13
ERCC8-203ENST00000439176 PARP14Q460N5 1801 aa8.02□□□□□ -1.13
ERCC8-203ENST00000439176 TRIM43BA6NCK2 446 aa8.02□□□□□ -1.13
ERCC8-203ENST00000439176 RCCD1A6NED2 376 aa8.02□□□□□ -1.13
ERCC8-203ENST00000439176 KIAA0355O15063 1070 aa8.02□□□□□ -1.13
ERCC8-203ENST00000439176 TLR3O15455 904 aaKnown RBP8.02□□□□□ -1.13
ERCC8-203ENST00000439176 ZEB2O60315 1214 aa8.02□□□□□ -1.13
ERCC8-203ENST00000439176 PLA2G6O60733 806 aa8.02□□□□□ -1.13
ERCC8-203ENST00000439176 ADAMTS4O75173 837 aa8.02□□□□□ -1.13
ERCC8-203ENST00000439176 ZMYND10O75800 440 aa8.02□□□□□ -1.13
ERCC8-203ENST00000439176 ALAS1P13196 640 aa8.02□□□□□ -1.13
ERCC8-203ENST00000439176 CST5P28325 142 aaPredicted RBP8.02□□□□□ -1.13
ERCC8-203ENST00000439176 MFAP1P55081 439 aaKnown RBP8.02□□□□□ -1.13
ERCC8-203ENST00000439176 SMAD3P84022 425 aaKnown RBP8.02□□□□□ -1.13
ERCC8-203ENST00000439176 FPGSQ05932 587 aa8.02□□□□□ -1.13
ERCC8-203ENST00000439176 SHHQ15465 462 aa8.02□□□□□ -1.13
ERCC8-203ENST00000439176 KCNA10Q16322 511 aa8.02□□□□□ -1.13
ERCC8-203ENST00000439176 CCDC144BQ3MJ40 725 aa8.02□□□□□ -1.13
ERCC8-203ENST00000439176 MCMDC2Q4G0Z9 681 aa8.02□□□□□ -1.13
ERCC8-203ENST00000439176 GNASQ5JWF2 1037 aa8.02□□□□□ -1.13
ERCC8-203ENST00000439176 ARMCX2Q7L311 632 aa8.02□□□□□ -1.13
ERCC8-203ENST00000439176 ANKRD33Q7Z3H0 272 aa8.02□□□□□ -1.13
ERCC8-203ENST00000439176 CCDC144CPQ8IYA2 1237 aa8.02□□□□□ -1.13
ERCC8-203ENST00000439176 OTUD7AQ8TE49 926 aaPredicted RBP8.02□□□□□ -1.13
ERCC8-203ENST00000439176 TRIM43Q96BQ3 446 aaPredicted RBP8.02□□□□□ -1.13
ERCC8-203ENST00000439176 TRERF1Q96PN7 1200 aa8.02□□□□□ -1.13
ERCC8-203ENST00000439176 MPHOSPH6Q99547 160 aaKnown RBP8.02□□□□□ -1.13
ERCC8-203ENST00000439176 TMEM134Q9H6X4 195 aa8.02□□□□□ -1.13
ERCC8-203ENST00000439176 RNF146Q9NTX7 359 aa8.02□□□□□ -1.13
ERCC8-203ENST00000439176 TSR3Q9UJK0 312 aaKnown RBP8.02□□□□□ -1.13
ERCC8-203ENST00000439176 PLXNA1Q9UIW2 1896 aa8.01□□□□□ -1.13
ERCC8-203ENST00000439176 A0A0U1RQG5 324 aaPredicted RBP8.01□□□□□ -1.13
ERCC8-203ENST00000439176 ORC4O43929 436 aa8.01□□□□□ -1.13
ERCC8-203ENST00000439176 CABYRO75952 493 aa8.01□□□□□ -1.13
ERCC8-203ENST00000439176 ASGR1P07306 291 aa8.01□□□□□ -1.13
ERCC8-203ENST00000439176 PCP11498 1178 aaKnown RBP8.01□□□□□ -1.13
ERCC8-203ENST00000439176 DNAJB2P25686 324 aa8.01□□□□□ -1.13
ERCC8-203ENST00000439176 PDE1AP54750 535 aa8.01□□□□□ -1.13
ERCC8-203ENST00000439176 GJA9P57773 515 aa8.01□□□□□ -1.13
ERCC8-203ENST00000439176 TNFAIP2Q03169 654 aa8.01□□□□□ -1.13
ERCC8-203ENST00000439176 CTDSPL2Q05D32 466 aa8.01□□□□□ -1.13
ERCC8-203ENST00000439176 HDAC1Q13547 482 aaPredicted RBP8.01□□□□□ -1.13
ERCC8-203ENST00000439176 ALX1Q15699 326 aa8.01□□□□□ -1.13
ERCC8-203ENST00000439176 CCDC96Q2M329 555 aa8.01□□□□□ -1.13
ERCC8-203ENST00000439176 RRP12Q5JTH9 1297 aaKnown RBP8.01□□□□□ -1.13
ERCC8-203ENST00000439176 CCDC129Q6ZRS4 1044 aa8.01□□□□□ -1.13
ERCC8-203ENST00000439176 KCTD1Q719H9 257 aa8.01□□□□□ -1.13
ERCC8-203ENST00000439176 SH3RF1Q7Z6J0 888 aa8.01□□□□□ -1.13
ERCC8-203ENST00000439176 KLHDC9Q8NEP7 349 aa8.01□□□□□ -1.13
ERCC8-203ENST00000439176 DCAF4Q8WV16 495 aa8.01□□□□□ -1.13
ERCC8-203ENST00000439176 RNPC3Q96LT9 517 aaKnown RBP8.01□□□□□ -1.13
ERCC8-203ENST00000439176 FAM161BQ96MY7 647 aa8.01□□□□□ -1.13
ERCC8-203ENST00000439176 PHOX2BQ99453 314 aa8.01□□□□□ -1.13
ERCC8-203ENST00000439176 SEZ6LQ9BYH1 1024 aa8.01□□□□□ -1.13
ERCC8-203ENST00000439176 AP5M1Q9H0R1 490 aa8.01□□□□□ -1.13
ERCC8-203ENST00000439176 RWDD1Q9H446 243 aaPredicted RBP8.01□□□□□ -1.13
ERCC8-203ENST00000439176 RNF41Q9H4P4 317 aaPredicted RBP8.01□□□□□ -1.13
ERCC8-203ENST00000439176 ADD3Q9UEY8 706 aaKnown RBP8.01□□□□□ -1.13
ERCC8-203ENST00000439176 ANAPC4Q9UJX5 808 aa8.01□□□□□ -1.13
ERCC8-203ENST00000439176 CCPG1Q9ULG6 757 aa8.01□□□□□ -1.13
ERCC8-203ENST00000439176 MTMR7Q9Y216 660 aa8.01□□□□□ -1.13
ERCC8-203ENST00000439176 GREB1LQ9C091 1923 aaPredicted RBP8.01□□□□□ -1.13
ERCC8-203ENST00000439176 MYH4Q9Y623 1939 aa8.01□□□□□ -1.13
ERCC8-203ENST00000439176 DNAH12Q6ZR08 3092 aa8.01□□□□□ -1.13
ERCC8-203ENST00000439176 TMEM265A0A087WTH1 108 aa8□□□□□ -1.13
ERCC8-203ENST00000439176 B4DLN1 442 aa8□□□□□ -1.13
ERCC8-203ENST00000439176 TIMP1P01033 207 aa8□□□□□ -1.13
ERCC8-203ENST00000439176 ICAM1P05362 532 aa8□□□□□ -1.13
ERCC8-203ENST00000439176 TOP1P11387 765 aaKnown RBP8□□□□□ -1.13
ERCC8-203ENST00000439176 NT5C2P49902 561 aa8□□□□□ -1.13
ERCC8-203ENST00000439176 MRPL12P52815 198 aaKnown RBP8□□□□□ -1.13
ERCC8-203ENST00000439176 FAAP100Q0VG06 881 aa8□□□□□ -1.13
ERCC8-203ENST00000439176 PPIGQ13427 754 aaKnown RBP eCLIP8□□□□□ -1.13
ERCC8-203ENST00000439176 C9orf50Q5SZB4 431 aa8□□□□□ -1.13
ERCC8-203ENST00000439176 IQSEC1Q6DN90 963 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms