RNA–Protein interactions for RNA: ENST00000439120.1

AC004540.1-201, humanhuman

TSL 2 BASIC

Gene AC004540.1, Length 891 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-201ENST00000439120 MORC4Q8TE76 937 aa21.59■■□□□ 1.05
AC004540.1-201ENST00000439120 CLEC4DQ8WXI8 215 aa21.59■■□□□ 1.05
AC004540.1-201ENST00000439120 RNPC3Q96LT9 517 aaKnown RBP21.59■■□□□ 1.05
AC004540.1-201ENST00000439120 UBA5Q9GZZ9 404 aa21.59■■□□□ 1.05
AC004540.1-201ENST00000439120 ZSWIM5Q9P217 1185 aa21.59■■□□□ 1.05
AC004540.1-201ENST00000439120 RAD50Q92878 1312 aa21.58■■□□□ 1.05
AC004540.1-201ENST00000439120 B4DLN1 442 aa21.58■■□□□ 1.05
AC004540.1-201ENST00000439120 CTAGE5O15320 804 aa21.58■■□□□ 1.05
AC004540.1-201ENST00000439120 TIMP1P01033 207 aa21.58■■□□□ 1.05
AC004540.1-201ENST00000439120 GSPT1P15170 499 aaKnown RBP21.58■■□□□ 1.05
AC004540.1-201ENST00000439120 CDK7P50613 346 aa21.58■■□□□ 1.05
AC004540.1-201ENST00000439120 MRPL12P52815 198 aaKnown RBP21.58■■□□□ 1.05
AC004540.1-201ENST00000439120 PDE4DQ08499 809 aa21.58■■□□□ 1.05
AC004540.1-201ENST00000439120 FAM109BQ6ICB4 259 aaPredicted RBP21.58■■□□□ 1.05
AC004540.1-201ENST00000439120 ENAHQ8N8S7 591 aaPredicted RBP21.58■■□□□ 1.05
AC004540.1-201ENST00000439120 SLC17A8Q8NDX2 589 aa21.58■■□□□ 1.05
AC004540.1-201ENST00000439120 CPVLQ9H3G5 476 aa21.58■■□□□ 1.05
AC004540.1-201ENST00000439120 Q9Y3F1 56 aa21.58■■□□□ 1.05
AC004540.1-201ENST00000439120 PARP1P09874 1014 aaKnown RBP21.57■■□□□ 1.04
AC004540.1-201ENST00000439120 RPS6P62753 249 aaKnown RBP21.57■■□□□ 1.04
AC004540.1-201ENST00000439120 TRDNQ13061 729 aa21.57■■□□□ 1.04
AC004540.1-201ENST00000439120 CDC37Q16543 378 aaPredicted RBP21.57■■□□□ 1.04
AC004540.1-201ENST00000439120 IFIT1BQ5T764 474 aaKnown RBP21.57■■□□□ 1.04
AC004540.1-201ENST00000439120 ANKS1AQ92625 1134 aa21.57■■□□□ 1.04
AC004540.1-201ENST00000439120 WDR11Q9BZH6 1224 aa21.57■■□□□ 1.04
AC004540.1-201ENST00000439120 TBX21Q9UL17 535 aa21.57■■□□□ 1.04
AC004540.1-201ENST00000439120 STXBP5LQ9Y2K9 1186 aa21.57■■□□□ 1.04
AC004540.1-201ENST00000439120 DUSP28Q4G0W2 176 aa21.56■■□□□ 1.04
AC004540.1-201ENST00000439120 ADGRF4Q8IZF3 695 aa21.56■■□□□ 1.04
AC004540.1-201ENST00000439120 DNERQ8NFT8 737 aa21.56■■□□□ 1.04
AC004540.1-201ENST00000439120 FAM161BQ96MY7 647 aa21.56■■□□□ 1.04
AC004540.1-201ENST00000439120 ABCB11O95342 1321 aa21.55■■□□□ 1.04
AC004540.1-201ENST00000439120 PTGS1P23219 599 aa21.55■■□□□ 1.04
AC004540.1-201ENST00000439120 EPHB4P54760 987 aa21.55■■□□□ 1.04
AC004540.1-201ENST00000439120 SMAD3P84022 425 aaKnown RBP21.55■■□□□ 1.04
AC004540.1-201ENST00000439120 ITGA7Q13683 1181 aa21.55■■□□□ 1.04
AC004540.1-201ENST00000439120 MFSD5Q6N075 450 aa21.55■■□□□ 1.04
AC004540.1-201ENST00000439120 FAM126BQ8IXS8 530 aa21.55■■□□□ 1.04
AC004540.1-201ENST00000439120 TMEM199Q8N511 208 aa21.55■■□□□ 1.04
AC004540.1-201ENST00000439120 IL25Q9H293 177 aa21.55■■□□□ 1.04
AC004540.1-201ENST00000439120 LAMA2P24043 3122 aaKnown RBP21.54■■□□□ 1.04
AC004540.1-201ENST00000439120 CPT1AP50416 773 aa21.54■■□□□ 1.04
AC004540.1-201ENST00000439120 PPIGQ13427 754 aaKnown RBP eCLIP21.54■■□□□ 1.04
AC004540.1-201ENST00000439120 PPP2R5BQ15173 497 aa21.54■■□□□ 1.04
AC004540.1-201ENST00000439120 BRDTQ58F21 947 aaPredicted RBP21.54■■□□□ 1.04
AC004540.1-201ENST00000439120 SEZ6LQ9BYH1 1024 aa21.54■■□□□ 1.04
AC004540.1-201ENST00000439120 PPP1R12CQ9BZL4 782 aa21.54■■□□□ 1.04
AC004540.1-201ENST00000439120 VAT1LQ9HCJ6 419 aa21.54■■□□□ 1.04
AC004540.1-201ENST00000439120 U3KPZ7 1027 aaPredicted RBP21.54■■□□□ 1.04
AC004540.1-201ENST00000439120 MYH6P13533 1939 aa21.53■■□□□ 1.04
AC004540.1-201ENST00000439120 TMEM63BQ5T3F8 832 aa21.53■■□□□ 1.04
AC004540.1-201ENST00000439120 MCF2L2Q86YR7 1114 aa21.53■■□□□ 1.04
AC004540.1-201ENST00000439120 RGS22Q8NE09 1264 aa21.53■■□□□ 1.04
AC004540.1-201ENST00000439120 OR6J1Q8NGC5 347 aa21.53■■□□□ 1.04
AC004540.1-201ENST00000439120 GPHNQ9NQX3 736 aaPredicted RBP21.53■■□□□ 1.04
AC004540.1-201ENST00000439120 POLR3EQ9NVU0 708 aa21.53■■□□□ 1.04
AC004540.1-201ENST00000439120 COL6A3P12111 3177 aa21.52■■□□□ 1.04
AC004540.1-201ENST00000439120 CHMLP26374 656 aa21.52■■□□□ 1.04
AC004540.1-201ENST00000439120 QRICH1Q2TAL8 776 aa21.52■■□□□ 1.04
AC004540.1-201ENST00000439120 RALYLQ86SE5 291 aaKnown RBP21.52■■□□□ 1.04
AC004540.1-201ENST00000439120 FBXO11Q86XK2 927 aa21.52■■□□□ 1.04
AC004540.1-201ENST00000439120 SCFD2Q8WU76 684 aa21.52■■□□□ 1.04
AC004540.1-201ENST00000439120 MAF1Q9H063 256 aa21.52■■□□□ 1.04
AC004540.1-201ENST00000439120 MRPL11Q9Y3B7 192 aaKnown RBP21.52■■□□□ 1.04
AC004540.1-201ENST00000439120 RBM47A0AV96 593 aaKnown RBP21.51■■□□□ 1.03
AC004540.1-201ENST00000439120 ERICH2A1L162 156 aa21.51■■□□□ 1.03
AC004540.1-201ENST00000439120 NKRFO15226 690 aaKnown RBP eCLIP21.51■■□□□ 1.03
AC004540.1-201ENST00000439120 CD4P01730 458 aa21.51■■□□□ 1.03
AC004540.1-201ENST00000439120 MYL3P08590 195 aa21.51■■□□□ 1.03
AC004540.1-201ENST00000439120 PSMC6P62333 389 aa21.51■■□□□ 1.03
AC004540.1-201ENST00000439120 SLC43A3Q8NBI5 491 aa21.51■■□□□ 1.03
AC004540.1-201ENST00000439120 HIPK3Q9H422 1215 aa21.51■■□□□ 1.03
AC004540.1-201ENST00000439120 TXNP10599 105 aaKnown RBP21.5■■□□□ 1.03
AC004540.1-201ENST00000439120 CSF2RAP15509 400 aa21.5■■□□□ 1.03
AC004540.1-201ENST00000439120 EDNRBP24530 442 aa21.5■■□□□ 1.03
AC004540.1-201ENST00000439120 CYB5R4Q7L1T6 521 aa21.5■■□□□ 1.03
AC004540.1-201ENST00000439120 GUCD1Q96NT3 240 aa21.5■■□□□ 1.03
AC004540.1-201ENST00000439120 JMJD4Q9H9V9 463 aa21.5■■□□□ 1.03
AC004540.1-201ENST00000439120 CYP2C18P33260 490 aa21.49■■□□□ 1.03
AC004540.1-201ENST00000439120 PTH1RQ03431 593 aa21.49■■□□□ 1.03
AC004540.1-201ENST00000439120 TTLL4Q14679 1199 aa21.49■■□□□ 1.03
AC004540.1-201ENST00000439120 SART3Q15020 963 aaKnown RBP21.49■■□□□ 1.03
AC004540.1-201ENST00000439120 PSRC1Q6PGN9 363 aaPredicted RBP21.49■■□□□ 1.03
AC004540.1-201ENST00000439120 NSUN6Q8TEA1 469 aaKnown RBP21.49■■□□□ 1.03
AC004540.1-201ENST00000439120 BUD13Q9BRD0 619 aaKnown RBP eCLIP21.49■■□□□ 1.03
AC004540.1-201ENST00000439120 AMNQ9BXJ7 453 aa21.49■■□□□ 1.03
AC004540.1-201ENST00000439120 HSFX4A0A1B0GTS1 333 aaPredicted RBP21.48■■□□□ 1.03
AC004540.1-201ENST00000439120 HSFX3A0A1B0GWH4 333 aaPredicted RBP21.48■■□□□ 1.03
AC004540.1-201ENST00000439120 KLRF2D3W0D1 207 aa21.48■■□□□ 1.03
AC004540.1-201ENST00000439120 IFIT3O14879 490 aaKnown RBP21.48■■□□□ 1.03
AC004540.1-201ENST00000439120 CYP21A2P08686 494 aa21.48■■□□□ 1.03
AC004540.1-201ENST00000439120 PURAQ00577 322 aaKnown RBP21.48■■□□□ 1.03
AC004540.1-201ENST00000439120 SEC23AQ15436 765 aa21.48■■□□□ 1.03
AC004540.1-201ENST00000439120 STAG2Q8N3U4 1231 aa21.48■■□□□ 1.03
AC004540.1-201ENST00000439120 NCOA7Q8NI08 942 aa21.48■■□□□ 1.03
AC004540.1-201ENST00000439120 MTG1Q9BT17 334 aaPredicted RBP21.48■■□□□ 1.03
AC004540.1-201ENST00000439120 TRPV6Q9H1D0 765 aa21.48■■□□□ 1.03
AC004540.1-201ENST00000439120 SEMA6BQ9H3T3 888 aa21.48■■□□□ 1.03
AC004540.1-201ENST00000439120 GRIN2DO15399 1336 aa21.48■■□□□ 1.03
AC004540.1-201ENST00000439120 B4GALT4O60513 344 aa21.47■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms