RNA–Protein interactions for RNA: ENST00000438518.5

HDAC6-208, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-208ENST00000438518 CASP8AP2Q9UKL3 1982 aa21.13■□□□□ 0.97
HDAC6-208ENST00000438518 ZNFX1Q9P2E3 1918 aaKnown RBP21.12■□□□□ 0.97
HDAC6-208ENST00000438518 SLC15A5A6NIM6 579 aa21.12■□□□□ 0.97
HDAC6-208ENST00000438518 OPLAHO14841 1288 aa21.12■□□□□ 0.97
HDAC6-208ENST00000438518 MMP1P03956 469 aa21.12■□□□□ 0.97
HDAC6-208ENST00000438518 AP3B2Q13367 1082 aa21.12■□□□□ 0.97
HDAC6-208ENST00000438518 SAFBQ15424 915 aaKnown RBP eCLIP21.12■□□□□ 0.97
HDAC6-208ENST00000438518 LARP1BQ659C4 914 aaKnown RBP21.12■□□□□ 0.97
HDAC6-208ENST00000438518 AIFM3Q96NN9 605 aa21.12■□□□□ 0.97
HDAC6-208ENST00000438518 SLC5A4Q9NY91 659 aa21.12■□□□□ 0.97
HDAC6-208ENST00000438518 CYP39A1Q9NYL5 469 aa21.12■□□□□ 0.97
HDAC6-208ENST00000438518 PLXNA1Q9UIW2 1896 aa21.11■□□□□ 0.97
HDAC6-208ENST00000438518 LOC102724159A0A0B4J2E5 919 aa21.11■□□□□ 0.97
HDAC6-208ENST00000438518 CFBP00751 764 aa21.11■□□□□ 0.97
HDAC6-208ENST00000438518 FOSP01100 380 aaPredicted RBP21.11■□□□□ 0.97
HDAC6-208ENST00000438518 HOXD10P28358 340 aa21.11■□□□□ 0.97
HDAC6-208ENST00000438518 PSMC4P43686 418 aa21.11■□□□□ 0.97
HDAC6-208ENST00000438518 PWP2Q15269 919 aaKnown RBP21.11■□□□□ 0.97
HDAC6-208ENST00000438518 KRT40Q6A162 431 aa21.11■□□□□ 0.97
HDAC6-208ENST00000438518 NSMFQ6X4W1 530 aa21.11■□□□□ 0.97
HDAC6-208ENST00000438518 ZNF296Q8WUU4 475 aaPredicted RBP21.11■□□□□ 0.97
HDAC6-208ENST00000438518 DIS3Q9Y2L1 958 aaKnown RBP21.11■□□□□ 0.97
HDAC6-208ENST00000438518 H3BQV1 296 aa21.1■□□□□ 0.97
HDAC6-208ENST00000438518 MEIS2O14770 477 aa21.1■□□□□ 0.97
HDAC6-208ENST00000438518 PRMT2P55345 433 aa21.1■□□□□ 0.97
HDAC6-208ENST00000438518 RPS6P62753 249 aaKnown RBP21.1■□□□□ 0.97
HDAC6-208ENST00000438518 IFFO2Q5TF58 517 aa21.1■□□□□ 0.97
HDAC6-208ENST00000438518 REXO1Q8N1G1 1221 aaKnown RBP21.1■□□□□ 0.97
HDAC6-208ENST00000438518 DNERQ8NFT8 737 aa21.1■□□□□ 0.97
HDAC6-208ENST00000438518 NUDT12Q9BQG2 462 aa21.1■□□□□ 0.97
HDAC6-208ENST00000438518 EHMT1Q9H9B1 1298 aa21.1■□□□□ 0.97
HDAC6-208ENST00000438518 PCNTO95613 3336 aa21.1■□□□□ 0.97
HDAC6-208ENST00000438518 DNAJC25-GNG10A0A024R161 153 aa21.09■□□□□ 0.97
HDAC6-208ENST00000438518 HSPA1AP0DMV8 641 aaKnown RBP21.09■□□□□ 0.97
HDAC6-208ENST00000438518 HSPA1BP0DMV9 641 aaKnown RBP21.09■□□□□ 0.97
HDAC6-208ENST00000438518 TAL1P17542 331 aaPredicted RBP21.09■□□□□ 0.97
HDAC6-208ENST00000438518 KRT2P35908 639 aa21.09■□□□□ 0.97
HDAC6-208ENST00000438518 CLK2P49760 499 aaKnown RBP21.09■□□□□ 0.97
HDAC6-208ENST00000438518 MORN1Q5T089 497 aa21.09■□□□□ 0.97
HDAC6-208ENST00000438518 BLIDQ8IZY5 108 aa21.09■□□□□ 0.97
HDAC6-208ENST00000438518 SHISA4Q96DD7 197 aa21.09■□□□□ 0.97
HDAC6-208ENST00000438518 MPHOSPH6Q99547 160 aaKnown RBP21.09■□□□□ 0.97
HDAC6-208ENST00000438518 FOXD4L1Q9NU39 408 aa21.09■□□□□ 0.97
HDAC6-208ENST00000438518 ADD3Q9UEY8 706 aaKnown RBP21.09■□□□□ 0.97
HDAC6-208ENST00000438518 LCTP09848 1927 aa21.08■□□□□ 0.97
HDAC6-208ENST00000438518 SPDYE3A6NKU9 549 aa21.08■□□□□ 0.97
HDAC6-208ENST00000438518 B4DLN1 442 aa21.08■□□□□ 0.97
HDAC6-208ENST00000438518 POTEB2H3BUK9 544 aa21.08■□□□□ 0.97
HDAC6-208ENST00000438518 HOXC6P09630 235 aa21.08■□□□□ 0.97
HDAC6-208ENST00000438518 ADORA2AP29274 412 aa21.08■□□□□ 0.97
HDAC6-208ENST00000438518 CTCFP49711 727 aaPredicted RBP21.08■□□□□ 0.97
HDAC6-208ENST00000438518 BAATQ14032 418 aaPredicted RBP21.08■□□□□ 0.97
HDAC6-208ENST00000438518 ZNF467Q7Z7K2 595 aaPredicted RBP21.08■□□□□ 0.97
HDAC6-208ENST00000438518 SYTL5Q8TDW5 730 aaPredicted RBP21.08■□□□□ 0.97
HDAC6-208ENST00000438518 TRIM47Q96LD4 638 aa21.08■□□□□ 0.97
HDAC6-208ENST00000438518 FOXP1Q9H334 677 aaPredicted RBP21.08■□□□□ 0.97
HDAC6-208ENST00000438518 KCNJ14Q9UNX9 436 aa21.08■□□□□ 0.97
HDAC6-208ENST00000438518 ZSWIM8A7E2V4 1837 aa21.08■□□□□ 0.96
HDAC6-208ENST00000438518 DTNBO60941 627 aa21.07■□□□□ 0.96
HDAC6-208ENST00000438518 RGS2P41220 211 aa21.07■□□□□ 0.96
HDAC6-208ENST00000438518 MAP2K5Q13163 448 aa21.07■□□□□ 0.96
HDAC6-208ENST00000438518 NPY5RQ15761 445 aa21.07■□□□□ 0.96
HDAC6-208ENST00000438518 SLC30A10Q6XR72 485 aa21.07■□□□□ 0.96
HDAC6-208ENST00000438518 MSL3Q8N5Y2 521 aaKnown RBP21.07■□□□□ 0.96
HDAC6-208ENST00000438518 FAM133AQ8N9E0 248 aa21.07■□□□□ 0.96
HDAC6-208ENST00000438518 CD99L2Q8TCZ2 262 aa21.07■□□□□ 0.96
HDAC6-208ENST00000438518 M0R2N6 131 aa21.06■□□□□ 0.96
HDAC6-208ENST00000438518 HSPA8P11142 646 aaKnown RBP21.06■□□□□ 0.96
HDAC6-208ENST00000438518 XRCC5P13010 732 aaKnown RBP21.06■□□□□ 0.96
HDAC6-208ENST00000438518 SYT1P21579 422 aa21.06■□□□□ 0.96
HDAC6-208ENST00000438518 CTGFP29279 349 aa21.06■□□□□ 0.96
HDAC6-208ENST00000438518 USP17L6PQ6QN14 398 aa21.06■□□□□ 0.96
HDAC6-208ENST00000438518 KRT25Q7Z3Z0 450 aa21.06■□□□□ 0.96
HDAC6-208ENST00000438518 DPP9Q86TI2 863 aa21.06■□□□□ 0.96
HDAC6-208ENST00000438518 DIS3L2Q8IYB7 885 aaKnown RBP21.06■□□□□ 0.96
HDAC6-208ENST00000438518 TRMT44Q8IYL2 757 aaKnown RBP21.06■□□□□ 0.96
HDAC6-208ENST00000438518 USP6NLQ92738 828 aa21.06■□□□□ 0.96
HDAC6-208ENST00000438518 IPO9Q96P70 1041 aaKnown RBP21.06■□□□□ 0.96
HDAC6-208ENST00000438518 TSKSQ9UJT2 592 aa21.06■□□□□ 0.96
HDAC6-208ENST00000438518 FRMPD4Q14CM0 1322 aa21.05■□□□□ 0.96
HDAC6-208ENST00000438518 FOXN1O15353 648 aa21.05■□□□□ 0.96
HDAC6-208ENST00000438518 STX6O43752 255 aa21.05■□□□□ 0.96
HDAC6-208ENST00000438518 IRF5Q13568 498 aa21.05■□□□□ 0.96
HDAC6-208ENST00000438518 ZNF792Q3KQV3 632 aa21.05■□□□□ 0.96
HDAC6-208ENST00000438518 NSUN6Q8TEA1 469 aaKnown RBP21.05■□□□□ 0.96
HDAC6-208ENST00000438518 TBC1D5Q92609 795 aa21.05■□□□□ 0.96
HDAC6-208ENST00000438518 APBA2Q99767 749 aa21.05■□□□□ 0.96
HDAC6-208ENST00000438518 ARHGAP39Q9C0H5 1083 aa21.05■□□□□ 0.96
HDAC6-208ENST00000438518 GJB4Q9NTQ9 266 aa21.05■□□□□ 0.96
HDAC6-208ENST00000438518 SRRDQ9UH36 339 aa21.05■□□□□ 0.96
HDAC6-208ENST00000438518 GJD2Q9UKL4 321 aa21.05■□□□□ 0.96
HDAC6-208ENST00000438518 HOXA13P31271 388 aaPredicted RBP21.04■□□□□ 0.96
HDAC6-208ENST00000438518 GNL2Q13823 731 aaKnown RBP21.04■□□□□ 0.96
HDAC6-208ENST00000438518 UBE2SQ16763 222 aa21.04■□□□□ 0.96
HDAC6-208ENST00000438518 SPRYD3Q8NCJ5 442 aa21.04■□□□□ 0.96
HDAC6-208ENST00000438518 IWS1Q96ST2 819 aa21.04■□□□□ 0.96
HDAC6-208ENST00000438518 RMDN3Q96TC7 470 aa21.04■□□□□ 0.96
HDAC6-208ENST00000438518 PCDHA6Q9UN73 950 aa21.04■□□□□ 0.96
HDAC6-208ENST00000438518 PCDHA8Q9Y5H6 950 aa21.04■□□□□ 0.96
HDAC6-208ENST00000438518 DOCK3Q8IZD9 2030 aa21.04■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms