RNA–Protein interactions for RNA: ENST00000438213.5

CTSD-205, Transcript of cathepsin D, humanhuman

TSL 2

Gene CTSD, Length 946 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-205ENST00000438213 CCDC82Q8N4S0 544 aa18.95■□□□□ 0.62
CTSD-205ENST00000438213 ANKLE1Q8NAG6 615 aa18.95■□□□□ 0.62
CTSD-205ENST00000438213 DNERQ8NFT8 737 aa18.95■□□□□ 0.62
CTSD-205ENST00000438213 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.95■□□□□ 0.62
CTSD-205ENST00000438213 MAP3K20Q9NYL2 800 aaKnown RBP18.95■□□□□ 0.62
CTSD-205ENST00000438213 OGDHLQ9ULD0 1010 aa18.95■□□□□ 0.62
CTSD-205ENST00000438213 PPP1R11O60927 126 aaPredicted RBP18.94■□□□□ 0.62
CTSD-205ENST00000438213 SEC24BO95487 1268 aa18.94■□□□□ 0.62
CTSD-205ENST00000438213 METAP2P50579 478 aaKnown RBP eCLIP18.94■□□□□ 0.62
CTSD-205ENST00000438213 ACVR2BQ13705 512 aa18.94■□□□□ 0.62
CTSD-205ENST00000438213 SHISA4Q96DD7 197 aa18.94■□□□□ 0.62
CTSD-205ENST00000438213 FGD4Q96M96 766 aa18.94■□□□□ 0.62
CTSD-205ENST00000438213 UPF3BQ9BZI7 483 aaKnown RBP18.94■□□□□ 0.62
CTSD-205ENST00000438213 PDRG1Q9NUG6 133 aa18.94■□□□□ 0.62
CTSD-205ENST00000438213 FAM184BQ9ULE4 1060 aa18.94■□□□□ 0.62
CTSD-205ENST00000438213 GTF3C3Q9Y5Q9 886 aa18.94■□□□□ 0.62
CTSD-205ENST00000438213 PLXNA1Q9UIW2 1896 aa18.93■□□□□ 0.62
CTSD-205ENST00000438213 CFBP00751 764 aa18.93■□□□□ 0.62
CTSD-205ENST00000438213 ZNF865P0CJ78 1059 aaPredicted RBP18.93■□□□□ 0.62
CTSD-205ENST00000438213 SLC30A10Q6XR72 485 aa18.93■□□□□ 0.62
CTSD-205ENST00000438213 CMTR1Q8N1G2 835 aaKnown RBP18.93■□□□□ 0.62
CTSD-205ENST00000438213 TBC1D5Q92609 795 aa18.93■□□□□ 0.62
CTSD-205ENST00000438213 ZHX1Q9UKY1 873 aaPredicted RBP18.93■□□□□ 0.62
CTSD-205ENST00000438213 RBBP6Q7Z6E9 1792 aaKnown RBP18.92■□□□□ 0.62
CTSD-205ENST00000438213 FARP2O94887 1054 aaPredicted RBP18.92■□□□□ 0.62
CTSD-205ENST00000438213 AKR1A1P14550 325 aa18.92■□□□□ 0.62
CTSD-205ENST00000438213 ALDH5A1P51649 535 aaPredicted RBP18.92■□□□□ 0.62
CTSD-205ENST00000438213 EVCP57679 992 aa18.92■□□□□ 0.62
CTSD-205ENST00000438213 C8orf34Q49A92 452 aa18.92■□□□□ 0.62
CTSD-205ENST00000438213 ARRDC4Q8NCT1 418 aa18.92■□□□□ 0.62
CTSD-205ENST00000438213 SYTL5Q8TDW5 730 aaPredicted RBP18.92■□□□□ 0.62
CTSD-205ENST00000438213 NSUN6Q8TEA1 469 aaKnown RBP18.92■□□□□ 0.62
CTSD-205ENST00000438213 GCOM1H8Y6P7 765 aaPredicted RBP18.91■□□□□ 0.62
CTSD-205ENST00000438213 POLR2MP0CAP2 368 aa18.91■□□□□ 0.62
CTSD-205ENST00000438213 RARBP10826 455 aa18.91■□□□□ 0.62
CTSD-205ENST00000438213 MORC4Q8TE76 937 aa18.91■□□□□ 0.62
CTSD-205ENST00000438213 PURBQ96QR8 312 aaKnown RBP18.91■□□□□ 0.62
CTSD-205ENST00000438213 MYH6P13533 1939 aa18.91■□□□□ 0.62
CTSD-205ENST00000438213 PDIA3P30101 505 aaKnown RBP18.9■□□□□ 0.62
CTSD-205ENST00000438213 CDC27P30260 824 aa18.9■□□□□ 0.62
CTSD-205ENST00000438213 ADD1P35611 737 aaKnown RBP18.9■□□□□ 0.62
CTSD-205ENST00000438213 HSD17B4P51659 736 aa18.9■□□□□ 0.62
CTSD-205ENST00000438213 GHRHRQ02643 423 aa18.9■□□□□ 0.62
CTSD-205ENST00000438213 PDE4DQ08499 809 aa18.9■□□□□ 0.62
CTSD-205ENST00000438213 TOB2Q14106 344 aaPredicted RBP18.9■□□□□ 0.62
CTSD-205ENST00000438213 ANKRD1Q15327 319 aa18.9■□□□□ 0.62
CTSD-205ENST00000438213 NECAB2Q7Z6G3 386 aa18.9■□□□□ 0.62
CTSD-205ENST00000438213 IL17RAQ96F46 866 aa18.9■□□□□ 0.62
CTSD-205ENST00000438213 ZNF274Q96GC6 653 aaPredicted RBP18.9■□□□□ 0.62
CTSD-205ENST00000438213 TAAR1Q96RJ0 339 aa18.9■□□□□ 0.62
CTSD-205ENST00000438213 IWS1Q96ST2 819 aa18.9■□□□□ 0.62
CTSD-205ENST00000438213 RMDN3Q96TC7 470 aa18.9■□□□□ 0.62
CTSD-205ENST00000438213 ALDH8A1Q9H2A2 487 aaPredicted RBP18.9■□□□□ 0.62
CTSD-205ENST00000438213 VTA1Q9NP79 307 aa18.9■□□□□ 0.62
CTSD-205ENST00000438213 FAM217BQ9NTX9 383 aaPredicted RBP18.9■□□□□ 0.62
CTSD-205ENST00000438213 V9GY48 417 aaPredicted RBP18.9■□□□□ 0.62
CTSD-205ENST00000438213 OPLAHO14841 1288 aa18.89■□□□□ 0.61
CTSD-205ENST00000438213 CCDC144BQ3MJ40 725 aa18.89■□□□□ 0.61
CTSD-205ENST00000438213 ARHGEF16Q5VV41 709 aa18.89■□□□□ 0.61
CTSD-205ENST00000438213 ANO1Q5XXA6 986 aa18.89■□□□□ 0.61
CTSD-205ENST00000438213 IQSEC1Q6DN90 963 aa18.89■□□□□ 0.61
CTSD-205ENST00000438213 CUL5Q93034 780 aa18.89■□□□□ 0.61
CTSD-205ENST00000438213 PAWRQ96IZ0 340 aaKnown RBP18.89■□□□□ 0.61
CTSD-205ENST00000438213 ASTN1O14525 1302 aa18.89■□□□□ 0.61
CTSD-205ENST00000438213 hCG_1642624A0A1W2PR95 340 aa18.88■□□□□ 0.61
CTSD-205ENST00000438213 AKAP17AQ02040 695 aaKnown RBP18.88■□□□□ 0.61
CTSD-205ENST00000438213 FUT2Q10981 343 aa18.88■□□□□ 0.61
CTSD-205ENST00000438213 NOL8Q76FK4 1167 aaKnown RBP18.88■□□□□ 0.61
CTSD-205ENST00000438213 EEPD1Q7L9B9 569 aa18.88■□□□□ 0.61
CTSD-205ENST00000438213 UBE2Q1Q7Z7E8 422 aa18.88■□□□□ 0.61
CTSD-205ENST00000438213 HTATIP2Q9BUP3 242 aa18.88■□□□□ 0.61
CTSD-205ENST00000438213 UPF2Q9HAU5 1272 aaKnown RBP18.88■□□□□ 0.61
CTSD-205ENST00000438213 SPC25Q9HBM1 224 aa18.88■□□□□ 0.61
CTSD-205ENST00000438213 XPNPEP3Q9NQH7 507 aa18.88■□□□□ 0.61
CTSD-205ENST00000438213 RBM27Q9P2N5 1060 aaKnown RBP18.88■□□□□ 0.61
CTSD-205ENST00000438213 hCG_1984214I3L0E3 225 aa18.87■□□□□ 0.61
CTSD-205ENST00000438213 DUSP11O75319 330 aaKnown RBP18.87■□□□□ 0.61
CTSD-205ENST00000438213 EDNRBP24530 442 aa18.87■□□□□ 0.61
CTSD-205ENST00000438213 HOXA13P31271 388 aaPredicted RBP18.87■□□□□ 0.61
CTSD-205ENST00000438213 CCT2P78371 535 aaKnown RBP18.87■□□□□ 0.61
CTSD-205ENST00000438213 TNFAIP2Q03169 654 aa18.87■□□□□ 0.61
CTSD-205ENST00000438213 STXBP2Q15833 593 aa18.87■□□□□ 0.61
CTSD-205ENST00000438213 HEATR3Q7Z4Q2 680 aa18.87■□□□□ 0.61
CTSD-205ENST00000438213 RNF180Q86T96 592 aa18.87■□□□□ 0.61
CTSD-205ENST00000438213 ZNF713Q8N859 430 aaPredicted RBP18.87■□□□□ 0.61
CTSD-205ENST00000438213 CNTNAP5Q8WYK1 1306 aa18.87■□□□□ 0.61
CTSD-205ENST00000438213 KATNBL1Q9H079 304 aa18.87■□□□□ 0.61
CTSD-205ENST00000438213 PSTPIP2Q9H939 334 aa18.87■□□□□ 0.61
CTSD-205ENST00000438213 COL20A1Q9P218 1284 aa18.87■□□□□ 0.61
CTSD-205ENST00000438213 NID2Q14112 1375 aa18.86■□□□□ 0.61
CTSD-205ENST00000438213 KBTBD13C9JR72 458 aa18.86■□□□□ 0.61
CTSD-205ENST00000438213 DNM1LO00429 736 aa18.86■□□□□ 0.61
CTSD-205ENST00000438213 CPLX1O14810 134 aa18.86■□□□□ 0.61
CTSD-205ENST00000438213 MYCNP04198 464 aaPredicted RBP18.86■□□□□ 0.61
CTSD-205ENST00000438213 NEK4P51957 841 aa18.86■□□□□ 0.61
CTSD-205ENST00000438213 TAPT1Q6NXT6 567 aa18.86■□□□□ 0.61
CTSD-205ENST00000438213 CPLX2Q6PUV4 134 aaKnown RBP18.86■□□□□ 0.61
CTSD-205ENST00000438213 FCHSD1Q86WN1 690 aa18.86■□□□□ 0.61
CTSD-205ENST00000438213 SMARCC2Q8TAQ2 1214 aa18.86■□□□□ 0.61
CTSD-205ENST00000438213 C11orf49Q9H6J7 331 aa18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms