RNA–Protein interactions for RNA: ENST00000438066.1

SPEN-202, Transcript of spen family transcriptional repressor, humanhuman

TSL 3

Gene SPEN, Length 1,733 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEN-202ENST00000438066 PPP1R9AQ9ULJ8 1098 aa7.95□□□□□ -1.14
SPEN-202ENST00000438066 RNF123Q5XPI4 1314 aa7.94□□□□□ -1.14
SPEN-202ENST00000438066 COL3A1P02461 1466 aaPredicted RBP7.94□□□□□ -1.14
SPEN-202ENST00000438066 NRG2O14511 850 aaPredicted RBP7.94□□□□□ -1.14
SPEN-202ENST00000438066 TM4SF5O14894 197 aa7.94□□□□□ -1.14
SPEN-202ENST00000438066 OPA1O60313 960 aa7.94□□□□□ -1.14
SPEN-202ENST00000438066 LILRB5O75023 590 aa7.94□□□□□ -1.14
SPEN-202ENST00000438066 NEK2P51955 445 aa7.94□□□□□ -1.14
SPEN-202ENST00000438066 SETDB1Q15047 1291 aa7.94□□□□□ -1.14
SPEN-202ENST00000438066 WDR43Q15061 677 aaKnown RBP eCLIP7.94□□□□□ -1.14
SPEN-202ENST00000438066 TRIM61Q5EBN2 209 aa7.94□□□□□ -1.14
SPEN-202ENST00000438066 MORC1Q86VD1 984 aa7.94□□□□□ -1.14
SPEN-202ENST00000438066 ADCY4Q8NFM4 1077 aa7.94□□□□□ -1.14
SPEN-202ENST00000438066 ZNF507Q8TCN5 953 aa7.94□□□□□ -1.14
SPEN-202ENST00000438066 SMARCC1Q92922 1105 aaPredicted RBP7.94□□□□□ -1.14
SPEN-202ENST00000438066 RELTQ969Z4 430 aa7.94□□□□□ -1.14
SPEN-202ENST00000438066 GBP3Q9H0R5 595 aa7.94□□□□□ -1.14
SPEN-202ENST00000438066 LRRC4BQ9NT99 713 aa7.94□□□□□ -1.14
SPEN-202ENST00000438066 GDF2Q9UK05 429 aaPredicted RBP7.94□□□□□ -1.14
SPEN-202ENST00000438066 ZNF451Q9Y4E5 1061 aa7.94□□□□□ -1.14
SPEN-202ENST00000438066 IQSEC2Q5JU85 1478 aa7.94□□□□□ -1.14
SPEN-202ENST00000438066 BLACEA4D250 179 aa7.93□□□□□ -1.14
SPEN-202ENST00000438066 NOP56O00567 594 aaKnown RBP7.93□□□□□ -1.14
SPEN-202ENST00000438066 TMPRSS2O15393 492 aa7.93□□□□□ -1.14
SPEN-202ENST00000438066 STAT4Q14765 748 aa7.93□□□□□ -1.14
SPEN-202ENST00000438066 SEPT7Q16181 437 aaKnown RBP7.93□□□□□ -1.14
SPEN-202ENST00000438066 MSL1Q68DK7 614 aa7.93□□□□□ -1.14
SPEN-202ENST00000438066 C14orf80Q86SX3 495 aa7.93□□□□□ -1.14
SPEN-202ENST00000438066 THEMISQ8N1K5 641 aaPredicted RBP7.93□□□□□ -1.14
SPEN-202ENST00000438066 XAGE3Q8WTP9 111 aa7.93□□□□□ -1.14
SPEN-202ENST00000438066 RPS6KC1Q96S38 1066 aa7.93□□□□□ -1.14
SPEN-202ENST00000438066 SPOCK3Q9BQ16 436 aa7.93□□□□□ -1.14
SPEN-202ENST00000438066 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.93□□□□□ -1.14
SPEN-202ENST00000438066 ZNF521Q96K83 1311 aa7.93□□□□□ -1.14
SPEN-202ENST00000438066 PPIP5K1Q6PFW1 1433 aa7.93□□□□□ -1.14
SPEN-202ENST00000438066 CHD2O14647 1828 aaKnown RBP7.93□□□□□ -1.14
SPEN-202ENST00000438066 AKAP10O43572 662 aa7.92□□□□□ -1.14
SPEN-202ENST00000438066 PPM1BO75688 479 aa7.92□□□□□ -1.14
SPEN-202ENST00000438066 SNRPBP14678 240 aaKnown RBP7.92□□□□□ -1.14
SPEN-202ENST00000438066 MAP2K3P46734 347 aa7.92□□□□□ -1.14
SPEN-202ENST00000438066 PRAMEF13Q5VWM6 474 aa7.92□□□□□ -1.14
SPEN-202ENST00000438066 CCSAPQ6IQ19 270 aaPredicted RBP7.92□□□□□ -1.14
SPEN-202ENST00000438066 NECAB2Q7Z6G3 386 aa7.92□□□□□ -1.14
SPEN-202ENST00000438066 UBE3DQ7Z6J8 389 aa7.92□□□□□ -1.14
SPEN-202ENST00000438066 MYO1HQ8N1T3 1032 aa7.92□□□□□ -1.14
SPEN-202ENST00000438066 CYB5D2Q8WUJ1 264 aa7.92□□□□□ -1.14
SPEN-202ENST00000438066 NANOS1Q8WY41 292 aaKnown RBP7.92□□□□□ -1.14
SPEN-202ENST00000438066 GMPR2Q9P2T1 348 aaKnown RBP7.92□□□□□ -1.14
SPEN-202ENST00000438066 NSFL1CQ9UNZ2 370 aaKnown RBP7.92□□□□□ -1.14
SPEN-202ENST00000438066 AKT3Q9Y243 479 aa7.92□□□□□ -1.14
SPEN-202ENST00000438066 EDC4Q6P2E9 1401 aaKnown RBP7.92□□□□□ -1.14
SPEN-202ENST00000438066 M0R082 166 aa7.92□□□□□ -1.14
SPEN-202ENST00000438066 GPR39O43194 453 aa7.92□□□□□ -1.14
SPEN-202ENST00000438066 CAPNS1P04632 268 aa7.92□□□□□ -1.14
SPEN-202ENST00000438066 JMJD7P0C870 316 aa7.92□□□□□ -1.14
SPEN-202ENST00000438066 ATF3P18847 181 aa7.92□□□□□ -1.14
SPEN-202ENST00000438066 SF1Q15637 639 aaKnown RBP7.92□□□□□ -1.14
SPEN-202ENST00000438066 ERICH6BQ5W0A0 696 aa7.92□□□□□ -1.14
SPEN-202ENST00000438066 RNF219Q5W0B1 726 aaPredicted RBP7.92□□□□□ -1.14
SPEN-202ENST00000438066 CDC37L1Q7L3B6 337 aa7.92□□□□□ -1.14
SPEN-202ENST00000438066 SMC5Q8IY18 1101 aa7.92□□□□□ -1.14
SPEN-202ENST00000438066 NALCNQ8IZF0 1738 aa7.92□□□□□ -1.14
SPEN-202ENST00000438066 RNF214Q8ND24 703 aa7.92□□□□□ -1.14
SPEN-202ENST00000438066 ZNF417Q8TAU3 575 aa7.92□□□□□ -1.14
SPEN-202ENST00000438066 BTN2A2Q8WVV5 523 aa7.92□□□□□ -1.14
SPEN-202ENST00000438066 ZNF587Q96SQ5 575 aaPredicted RBP7.92□□□□□ -1.14
SPEN-202ENST00000438066 PIK3R4Q99570 1358 aa7.92□□□□□ -1.14
SPEN-202ENST00000438066 MTFR1LQ9H019 292 aa7.92□□□□□ -1.14
SPEN-202ENST00000438066 DISC1Q9NRI5 854 aa7.92□□□□□ -1.14
SPEN-202ENST00000438066 CRIM1Q9NZV1 1036 aa7.92□□□□□ -1.14
SPEN-202ENST00000438066 MAP2P11137 1827 aaKnown RBP7.91□□□□□ -1.14
SPEN-202ENST00000438066 RGPD8O14715 1765 aaPredicted RBP7.91□□□□□ -1.14
SPEN-202ENST00000438066 NKTRP30414 1462 aaKnown RBP7.91□□□□□ -1.14
SPEN-202ENST00000438066 LOC101059915A0A1B0GWI6 518 aaPredicted RBP7.91□□□□□ -1.14
SPEN-202ENST00000438066 FYB1O15117 783 aa7.91□□□□□ -1.14
SPEN-202ENST00000438066 DLX3O60479 287 aa7.91□□□□□ -1.14
SPEN-202ENST00000438066 CD247P20963 164 aa7.91□□□□□ -1.14
SPEN-202ENST00000438066 GABREP78334 506 aa7.91□□□□□ -1.14
SPEN-202ENST00000438066 TMPRSS15P98073 1019 aa7.91□□□□□ -1.14
SPEN-202ENST00000438066 SLBPQ14493 270 aaKnown RBP eCLIP7.91□□□□□ -1.14
SPEN-202ENST00000438066 DHCR24Q15392 516 aa7.91□□□□□ -1.14
SPEN-202ENST00000438066 FOXD4L6Q3SYB3 417 aaPredicted RBP7.91□□□□□ -1.14
SPEN-202ENST00000438066 FOXD4L3Q6VB84 417 aaPredicted RBP7.91□□□□□ -1.14
SPEN-202ENST00000438066 HDGFL2Q7Z4V5 671 aaPredicted RBP7.91□□□□□ -1.14
SPEN-202ENST00000438066 CHPFQ8IZ52 775 aa7.91□□□□□ -1.14
SPEN-202ENST00000438066 SCLYQ96I15 445 aa7.91□□□□□ -1.14
SPEN-202ENST00000438066 FANCD2OSQ96PS1 177 aa7.91□□□□□ -1.14
SPEN-202ENST00000438066 KCNK4Q9NYG8 393 aa7.91□□□□□ -1.14
SPEN-202ENST00000438066 WHRNQ9P202 907 aa7.91□□□□□ -1.14
SPEN-202ENST00000438066 AP4E1Q9UPM8 1137 aa7.91□□□□□ -1.14
SPEN-202ENST00000438066 FMN2Q9NZ56 1722 aa7.91□□□□□ -1.14
SPEN-202ENST00000438066 CAND2O75155 1236 aa7.9□□□□□ -1.14
SPEN-202ENST00000438066 ASLP04424 464 aa7.9□□□□□ -1.14
SPEN-202ENST00000438066 POU3F2P20265 443 aaPredicted RBP7.9□□□□□ -1.14
SPEN-202ENST00000438066 CD68P34810 354 aaPredicted RBP7.9□□□□□ -1.14
SPEN-202ENST00000438066 MTHFSP49914 203 aa7.9□□□□□ -1.14
SPEN-202ENST00000438066 TTLL4Q14679 1199 aa7.9□□□□□ -1.14
SPEN-202ENST00000438066 EXOSC6Q5RKV6 272 aaKnown RBP7.9□□□□□ -1.14
SPEN-202ENST00000438066 GSTCDQ8NEC7 633 aa7.9□□□□□ -1.14
SPEN-202ENST00000438066 BRF1Q92994 677 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms