RNA–Protein interactions for RNA: ENST00000436359.1

AP001048.1-201, humanhuman

TSL 2 BASIC

Gene AP001048.1, Length 280 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP001048.1-201ENST00000436359 USP38Q8NB14 1042 aa8.56□□□□□ -1.04
AP001048.1-201ENST00000436359 RGS22Q8NE09 1264 aa8.56□□□□□ -1.04
AP001048.1-201ENST00000436359 DNERQ8NFT8 737 aa8.56□□□□□ -1.04
AP001048.1-201ENST00000436359 ANKS1AQ92625 1134 aa8.56□□□□□ -1.04
AP001048.1-201ENST00000436359 FAM227BQ96M60 508 aa8.56□□□□□ -1.04
AP001048.1-201ENST00000436359 TMEM47Q9BQJ4 181 aa8.56□□□□□ -1.04
AP001048.1-201ENST00000436359 HOMER2Q9NSB8 354 aa8.56□□□□□ -1.04
AP001048.1-201ENST00000436359 CCPG1Q9ULG6 757 aa8.56□□□□□ -1.04
AP001048.1-201ENST00000436359 NEDD4P46934 1319 aa8.55□□□□□ -1.04
AP001048.1-201ENST00000436359 UMODL1Q5DID0 1318 aa8.55□□□□□ -1.04
AP001048.1-201ENST00000436359 TCF20Q9UGU0 1960 aaKnown RBP8.55□□□□□ -1.04
AP001048.1-201ENST00000436359 LOXHD1Q8IVV2 1947 aa8.55□□□□□ -1.04
AP001048.1-201ENST00000436359 A6NJR5 290 aa8.55□□□□□ -1.04
AP001048.1-201ENST00000436359 PITPNM1O00562 1244 aa8.55□□□□□ -1.04
AP001048.1-201ENST00000436359 NKRFO15226 690 aaKnown RBP eCLIP8.55□□□□□ -1.04
AP001048.1-201ENST00000436359 TLR3O15455 904 aaKnown RBP8.55□□□□□ -1.04
AP001048.1-201ENST00000436359 B4GALT4O60513 344 aa8.55□□□□□ -1.04
AP001048.1-201ENST00000436359 ALAS1P13196 640 aa8.55□□□□□ -1.04
AP001048.1-201ENST00000436359 HOXD8P13378 290 aaPredicted RBP8.55□□□□□ -1.04
AP001048.1-201ENST00000436359 FOSL2P15408 326 aa8.55□□□□□ -1.04
AP001048.1-201ENST00000436359 BEX3Q00994 111 aa8.55□□□□□ -1.04
AP001048.1-201ENST00000436359 ITGA7Q13683 1181 aa8.55□□□□□ -1.04
AP001048.1-201ENST00000436359 GRIN2CQ14957 1233 aa8.55□□□□□ -1.04
AP001048.1-201ENST00000436359 TMEM63BQ5T3F8 832 aa8.55□□□□□ -1.04
AP001048.1-201ENST00000436359 GPATCH4Q5T3I0 446 aaKnown RBP8.55□□□□□ -1.04
AP001048.1-201ENST00000436359 TTBK2Q6IQ55 1244 aa8.55□□□□□ -1.04
AP001048.1-201ENST00000436359 CXCL17Q6UXB2 119 aa8.55□□□□□ -1.04
AP001048.1-201ENST00000436359 SLC30A10Q6XR72 485 aa8.55□□□□□ -1.04
AP001048.1-201ENST00000436359 SESTD1Q86VW0 696 aa8.55□□□□□ -1.04
AP001048.1-201ENST00000436359 TMEM199Q8N511 208 aa8.55□□□□□ -1.04
AP001048.1-201ENST00000436359 TIFAQ96CG3 184 aa8.55□□□□□ -1.04
AP001048.1-201ENST00000436359 FAM161BQ96MY7 647 aa8.55□□□□□ -1.04
AP001048.1-201ENST00000436359 ALDH8A1Q9H2A2 487 aaPredicted RBP8.55□□□□□ -1.04
AP001048.1-201ENST00000436359 HIPK3Q9H422 1215 aa8.55□□□□□ -1.04
AP001048.1-201ENST00000436359 ZNF576Q9H609 170 aa8.55□□□□□ -1.04
AP001048.1-201ENST00000436359 INCENPQ9NQS7 918 aa8.55□□□□□ -1.04
AP001048.1-201ENST00000436359 PDGFCQ9NRA1 345 aa8.55□□□□□ -1.04
AP001048.1-201ENST00000436359 ADD3Q9UEY8 706 aaKnown RBP8.55□□□□□ -1.04
AP001048.1-201ENST00000436359 RANBP6O60518 1105 aaKnown RBP8.54□□□□□ -1.04
AP001048.1-201ENST00000436359 MYCNP04198 464 aaPredicted RBP8.54□□□□□ -1.04
AP001048.1-201ENST00000436359 POU3F3P20264 500 aaPredicted RBP8.54□□□□□ -1.04
AP001048.1-201ENST00000436359 PTGS1P23219 599 aa8.54□□□□□ -1.04
AP001048.1-201ENST00000436359 RPS6P62753 249 aaKnown RBP8.54□□□□□ -1.04
AP001048.1-201ENST00000436359 PTPN11Q06124 597 aaPredicted RBP8.54□□□□□ -1.04
AP001048.1-201ENST00000436359 NMIQ13287 307 aaPredicted RBP8.54□□□□□ -1.04
AP001048.1-201ENST00000436359 RAB30Q15771 203 aa8.54□□□□□ -1.04
AP001048.1-201ENST00000436359 CCDC62Q6P9F0 684 aa8.54□□□□□ -1.04
AP001048.1-201ENST00000436359 ZNF365Q70YC5 407 aa8.54□□□□□ -1.04
AP001048.1-201ENST00000436359 DGKHQ86XP1 1220 aa8.54□□□□□ -1.04
AP001048.1-201ENST00000436359 MTMR8Q96EF0 704 aa8.54□□□□□ -1.04
AP001048.1-201ENST00000436359 CTAGE1Q96RT6 745 aa8.54□□□□□ -1.04
AP001048.1-201ENST00000436359 CRBNQ96SW2 442 aa8.54□□□□□ -1.04
AP001048.1-201ENST00000436359 POLR3EQ9NVU0 708 aa8.54□□□□□ -1.04
AP001048.1-201ENST00000436359 CXXC1Q9P0U4 656 aaPredicted RBP8.54□□□□□ -1.04
AP001048.1-201ENST00000436359 CTDP1Q9Y5B0 961 aaPredicted RBP8.54□□□□□ -1.04
AP001048.1-201ENST00000436359 DDX49Q9Y6V7 483 aaKnown RBP8.54□□□□□ -1.04
AP001048.1-201ENST00000436359 KIAA1671Q9BY89 1806 aa8.54□□□□□ -1.04
AP001048.1-201ENST00000436359 ZEB2O60315 1214 aa8.53□□□□□ -1.04
AP001048.1-201ENST00000436359 CYP2C18P33260 490 aa8.53□□□□□ -1.04
AP001048.1-201ENST00000436359 PBX2P40425 430 aa8.53□□□□□ -1.04
AP001048.1-201ENST00000436359 CPT1AP50416 773 aa8.53□□□□□ -1.04
AP001048.1-201ENST00000436359 BAATQ14032 418 aaPredicted RBP8.53□□□□□ -1.04
AP001048.1-201ENST00000436359 ADGRE1Q14246 886 aa8.53□□□□□ -1.04
AP001048.1-201ENST00000436359 NFRKBQ6P4R8 1299 aa8.53□□□□□ -1.04
AP001048.1-201ENST00000436359 PLEKHM2Q8IWE5 1019 aa8.53□□□□□ -1.04
AP001048.1-201ENST00000436359 SCFD2Q8WU76 684 aa8.53□□□□□ -1.04
AP001048.1-201ENST00000436359 EMID1Q96A84 441 aaPredicted RBP8.53□□□□□ -1.04
AP001048.1-201ENST00000436359 PURBQ96QR8 312 aaKnown RBP8.53□□□□□ -1.04
AP001048.1-201ENST00000436359 DSCC1Q9BVC3 393 aa8.53□□□□□ -1.04
AP001048.1-201ENST00000436359 PPP1R12CQ9BZL4 782 aa8.53□□□□□ -1.04
AP001048.1-201ENST00000436359 BCL11AQ9H165 835 aa8.53□□□□□ -1.04
AP001048.1-201ENST00000436359 RNF41Q9H4P4 317 aaPredicted RBP8.53□□□□□ -1.04
AP001048.1-201ENST00000436359 TNKSO95271 1327 aa8.53□□□□□ -1.04
AP001048.1-201ENST00000436359 FRMPD4Q14CM0 1322 aa8.53□□□□□ -1.04
AP001048.1-201ENST00000436359 OPLAHO14841 1288 aa8.52□□□□□ -1.05
AP001048.1-201ENST00000436359 ARIH2O95376 493 aa8.52□□□□□ -1.05
AP001048.1-201ENST00000436359 RFC2P35250 354 aa8.52□□□□□ -1.05
AP001048.1-201ENST00000436359 SLC16A2P36021 539 aa8.52□□□□□ -1.05
AP001048.1-201ENST00000436359 NUCB1Q02818 461 aa8.52□□□□□ -1.05
AP001048.1-201ENST00000436359 MKRN4PQ13434 485 aaPredicted RBP8.52□□□□□ -1.05
AP001048.1-201ENST00000436359 PPP2R5BQ15173 497 aa8.52□□□□□ -1.05
AP001048.1-201ENST00000436359 CCDC96Q2M329 555 aa8.52□□□□□ -1.05
AP001048.1-201ENST00000436359 TJAP1Q5JTD0 557 aa8.52□□□□□ -1.05
AP001048.1-201ENST00000436359 ANKRD45Q5TZF3 282 aa8.52□□□□□ -1.05
AP001048.1-201ENST00000436359 NSMFQ6X4W1 530 aa8.52□□□□□ -1.05
AP001048.1-201ENST00000436359 RNF207Q6ZRF8 634 aa8.52□□□□□ -1.05
AP001048.1-201ENST00000436359 WDR11Q9BZH6 1224 aa8.52□□□□□ -1.05
AP001048.1-201ENST00000436359 AP5M1Q9H0R1 490 aa8.52□□□□□ -1.05
AP001048.1-201ENST00000436359 MTIF3Q9H2K0 278 aaKnown RBP8.52□□□□□ -1.05
AP001048.1-201ENST00000436359 YBX2Q9Y2T7 364 aaKnown RBP8.52□□□□□ -1.05
AP001048.1-201ENST00000436359 PCDHA11Q9Y5I1 949 aa8.52□□□□□ -1.05
AP001048.1-201ENST00000436359 RAD50Q92878 1312 aa8.52□□□□□ -1.05
AP001048.1-201ENST00000436359 TTC3P53804 2025 aa8.51□□□□□ -1.05
AP001048.1-201ENST00000436359 GRXCR1A8MXD5 290 aa8.51□□□□□ -1.05
AP001048.1-201ENST00000436359 DYNC1LI2O43237 492 aaPredicted RBP8.51□□□□□ -1.05
AP001048.1-201ENST00000436359 KPNA6O60684 536 aa8.51□□□□□ -1.05
AP001048.1-201ENST00000436359 SUPT20HL2P0C7V6 817 aa8.51□□□□□ -1.05
AP001048.1-201ENST00000436359 SDSP20132 328 aa8.51□□□□□ -1.05
AP001048.1-201ENST00000436359 HOXC8P31273 242 aa8.51□□□□□ -1.05
AP001048.1-201ENST00000436359 HSD17B4P51659 736 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms