RNA–Protein interactions for RNA: ENST00000435953.2

AC004448.3-201, humanhuman

TSL 2 BASIC

Gene AC004448.3, Length 543 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004448.3-201ENST00000435953 ERVK-24P63145 666 aa11.3□□□□□ -0.6
AC004448.3-201ENST00000435953 HTRA3P83110 453 aa11.3□□□□□ -0.6
AC004448.3-201ENST00000435953 DNM1Q05193 864 aaKnown RBP11.3□□□□□ -0.6
AC004448.3-201ENST00000435953 BAATQ14032 418 aaPredicted RBP11.3□□□□□ -0.6
AC004448.3-201ENST00000435953 TAF1CQ15572 869 aaPredicted RBP11.3□□□□□ -0.6
AC004448.3-201ENST00000435953 PIK3AP1Q6ZUJ8 805 aa11.3□□□□□ -0.6
AC004448.3-201ENST00000435953 ANKRD13CQ8N6S4 541 aa11.3□□□□□ -0.6
AC004448.3-201ENST00000435953 ZNF396Q96N95 335 aaPredicted RBP11.3□□□□□ -0.6
AC004448.3-201ENST00000435953 MROH8Q9H579 483 aa11.3□□□□□ -0.6
AC004448.3-201ENST00000435953 ACAD9Q9H845 621 aa11.3□□□□□ -0.6
AC004448.3-201ENST00000435953 ZFYVE28Q9HCC9 887 aa11.3□□□□□ -0.6
AC004448.3-201ENST00000435953 FBXO40Q9UH90 709 aa11.3□□□□□ -0.6
AC004448.3-201ENST00000435953 BAZ2BQ9UIF8 2168 aaKnown RBP11.3□□□□□ -0.6
AC004448.3-201ENST00000435953 OTOFQ9HC10 1997 aa11.29□□□□□ -0.6
AC004448.3-201ENST00000435953 FAM205CA6NFA0 338 aa11.29□□□□□ -0.6
AC004448.3-201ENST00000435953 TLR2O60603 784 aa11.29□□□□□ -0.6
AC004448.3-201ENST00000435953 ALDH1A1P00352 501 aa11.29□□□□□ -0.6
AC004448.3-201ENST00000435953 ERCC3P19447 782 aa11.29□□□□□ -0.6
AC004448.3-201ENST00000435953 TRAPPC10P48553 1259 aa11.29□□□□□ -0.6
AC004448.3-201ENST00000435953 RPS6P62753 249 aaKnown RBP11.29□□□□□ -0.6
AC004448.3-201ENST00000435953 CCNA1P78396 465 aa11.29□□□□□ -0.6
AC004448.3-201ENST00000435953 AP3B2Q13367 1082 aa11.29□□□□□ -0.6
AC004448.3-201ENST00000435953 NONOQ15233 471 aaKnown RBP eCLIP11.29□□□□□ -0.6
AC004448.3-201ENST00000435953 RILPL1Q5EBL4 403 aa11.29□□□□□ -0.6
AC004448.3-201ENST00000435953 C17orf99Q6UX52 265 aa11.29□□□□□ -0.6
AC004448.3-201ENST00000435953 NSMFQ6X4W1 530 aa11.29□□□□□ -0.6
AC004448.3-201ENST00000435953 RNF207Q6ZRF8 634 aa11.29□□□□□ -0.6
AC004448.3-201ENST00000435953 FCHSD1Q86WN1 690 aa11.29□□□□□ -0.6
AC004448.3-201ENST00000435953 NCAPG2Q86XI2 1143 aa11.29□□□□□ -0.6
AC004448.3-201ENST00000435953 SHCBP1Q8NEM2 672 aa11.29□□□□□ -0.6
AC004448.3-201ENST00000435953 SYTL5Q8TDW5 730 aaPredicted RBP11.29□□□□□ -0.6
AC004448.3-201ENST00000435953 CHAMP1Q96JM3 812 aa11.29□□□□□ -0.6
AC004448.3-201ENST00000435953 R3HDMLQ9H3Y0 253 aa11.29□□□□□ -0.6
AC004448.3-201ENST00000435953 CFAP45Q9UL16 551 aa11.29□□□□□ -0.6
AC004448.3-201ENST00000435953 NOL7Q9UMY1 257 aaKnown RBP11.29□□□□□ -0.6
AC004448.3-201ENST00000435953 TRPM7Q96QT4 1865 aa11.28□□□□□ -0.6
AC004448.3-201ENST00000435953 SPDYE3A6NKU9 549 aa11.28□□□□□ -0.6
AC004448.3-201ENST00000435953 CA12O43570 354 aa11.28□□□□□ -0.6
AC004448.3-201ENST00000435953 EDIL3O43854 480 aa11.28□□□□□ -0.6
AC004448.3-201ENST00000435953 BCRP11274 1271 aa11.28□□□□□ -0.6
AC004448.3-201ENST00000435953 ATP2B1P20020 1258 aa11.28□□□□□ -0.6
AC004448.3-201ENST00000435953 USP11P51784 963 aa11.28□□□□□ -0.6
AC004448.3-201ENST00000435953 FAM110CQ1W6H9 321 aa11.28□□□□□ -0.6
AC004448.3-201ENST00000435953 INF2Q27J81 1249 aa11.28□□□□□ -0.6
AC004448.3-201ENST00000435953 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.28□□□□□ -0.6
AC004448.3-201ENST00000435953 ANKRD35Q8N283 1001 aa11.28□□□□□ -0.6
AC004448.3-201ENST00000435953 TBCKQ8TEA7 893 aa11.28□□□□□ -0.6
AC004448.3-201ENST00000435953 PGBD1Q96JS3 809 aa11.28□□□□□ -0.6
AC004448.3-201ENST00000435953 GBP4Q96PP9 640 aa11.28□□□□□ -0.6
AC004448.3-201ENST00000435953 USP28Q96RU2 1077 aa11.28□□□□□ -0.6
AC004448.3-201ENST00000435953 ANO3Q9BYT9 981 aa11.28□□□□□ -0.6
AC004448.3-201ENST00000435953 CYP39A1Q9NYL5 469 aa11.28□□□□□ -0.6
AC004448.3-201ENST00000435953 RTEL1Q9NZ71 1219 aa11.28□□□□□ -0.6
AC004448.3-201ENST00000435953 CPA4Q9UI42 421 aa11.28□□□□□ -0.6
AC004448.3-201ENST00000435953 RCOR1Q9UKL0 485 aa11.28□□□□□ -0.6
AC004448.3-201ENST00000435953 CLIC4Q9Y696 253 aa11.28□□□□□ -0.6
AC004448.3-201ENST00000435953 ADGRA2Q96PE1 1338 aa11.28□□□□□ -0.6
AC004448.3-201ENST00000435953 C1QTNF8P60827 252 aa11.27□□□□□ -0.61
AC004448.3-201ENST00000435953 KRT85P78386 507 aa11.27□□□□□ -0.61
AC004448.3-201ENST00000435953 CEBPZQ03701 1054 aaKnown RBP11.27□□□□□ -0.61
AC004448.3-201ENST00000435953 CRHR2Q13324 411 aa11.27□□□□□ -0.61
AC004448.3-201ENST00000435953 ZNF174Q15697 407 aa11.27□□□□□ -0.61
AC004448.3-201ENST00000435953 ANO1Q5XXA6 986 aa11.27□□□□□ -0.61
AC004448.3-201ENST00000435953 CCAR1Q8IX12 1150 aaKnown RBP11.27□□□□□ -0.61
AC004448.3-201ENST00000435953 TAAR1Q96RJ0 339 aa11.27□□□□□ -0.61
AC004448.3-201ENST00000435953 SCAND2PQ9GZW5 306 aaPredicted RBP11.27□□□□□ -0.61
AC004448.3-201ENST00000435953 PORCNQ9H237 461 aa11.27□□□□□ -0.61
AC004448.3-201ENST00000435953 EFCC1Q9HA90 598 aa11.27□□□□□ -0.61
AC004448.3-201ENST00000435953 A1CFQ9NQ94 594 aaKnown RBP11.27□□□□□ -0.61
AC004448.3-201ENST00000435953 COL20A1Q9P218 1284 aa11.27□□□□□ -0.61
AC004448.3-201ENST00000435953 CNPY2Q9Y2B0 182 aa11.27□□□□□ -0.61
AC004448.3-201ENST00000435953 CYP3A7-CYP3A51PA0A087WV96 503 aa11.26□□□□□ -0.61
AC004448.3-201ENST00000435953 STRNO43815 780 aa11.26□□□□□ -0.61
AC004448.3-201ENST00000435953 CYP3A4P08684 503 aa11.26□□□□□ -0.61
AC004448.3-201ENST00000435953 FCER1AP12319 257 aa11.26□□□□□ -0.61
AC004448.3-201ENST00000435953 HSPA6P17066 643 aa11.26□□□□□ -0.61
AC004448.3-201ENST00000435953 NCLP19338 710 aaKnown RBP11.26□□□□□ -0.61
AC004448.3-201ENST00000435953 CYP3A7P24462 503 aa11.26□□□□□ -0.61
AC004448.3-201ENST00000435953 SREBF1P36956 1147 aa11.26□□□□□ -0.61
AC004448.3-201ENST00000435953 NASPP49321 788 aaPredicted RBP11.26□□□□□ -0.61
AC004448.3-201ENST00000435953 NBR1Q14596 966 aa11.26□□□□□ -0.61
AC004448.3-201ENST00000435953 SLC39A14Q15043 492 aa11.26□□□□□ -0.61
AC004448.3-201ENST00000435953 SF3A1Q15459 793 aaKnown RBP11.26□□□□□ -0.61
AC004448.3-201ENST00000435953 LETM2Q2VYF4 491 aa11.26□□□□□ -0.61
AC004448.3-201ENST00000435953 TTC38Q5R3I4 469 aa11.26□□□□□ -0.61
AC004448.3-201ENST00000435953 SLC30A10Q6XR72 485 aa11.26□□□□□ -0.61
AC004448.3-201ENST00000435953 NEK8Q86SG6 692 aa11.26□□□□□ -0.61
AC004448.3-201ENST00000435953 CRYGNQ8WXF5 182 aa11.26□□□□□ -0.61
AC004448.3-201ENST00000435953 PURBQ96QR8 312 aaKnown RBP11.26□□□□□ -0.61
AC004448.3-201ENST00000435953 RMDN3Q96TC7 470 aa11.26□□□□□ -0.61
AC004448.3-201ENST00000435953 EHMT1Q9H9B1 1298 aa11.26□□□□□ -0.61
AC004448.3-201ENST00000435953 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.26□□□□□ -0.61
AC004448.3-201ENST00000435953 POLR3EQ9NVU0 708 aa11.26□□□□□ -0.61
AC004448.3-201ENST00000435953 PCDHB6Q9Y5E3 794 aa11.26□□□□□ -0.61
AC004448.3-201ENST00000435953 POTEB2H3BUK9 544 aa11.25□□□□□ -0.61
AC004448.3-201ENST00000435953 WNT7AO00755 349 aa11.25□□□□□ -0.61
AC004448.3-201ENST00000435953 CCNT1O60563 726 aaKnown RBP11.25□□□□□ -0.61
AC004448.3-201ENST00000435953 YEATS4O95619 227 aa11.25□□□□□ -0.61
AC004448.3-201ENST00000435953 MAPK4P31152 587 aa11.25□□□□□ -0.61
AC004448.3-201ENST00000435953 CIITAP33076 1130 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms