RNA–Protein interactions for RNA: ENST00000434795.5

CPNE1-213, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-213ENST00000434795 FBXO16Q8IX29 292 aaPredicted RBP20.9■□□□□ 0.94
CPNE1-213ENST00000434795 MAP4K1Q92918 833 aa20.9■□□□□ 0.94
CPNE1-213ENST00000434795 VTI1AQ96AJ9 217 aa20.9■□□□□ 0.94
CPNE1-213ENST00000434795 MAF1Q9H063 256 aa20.9■□□□□ 0.94
CPNE1-213ENST00000434795 JMJD4Q9H9V9 463 aa20.9■□□□□ 0.94
CPNE1-213ENST00000434795 VAT1LQ9HCJ6 419 aa20.9■□□□□ 0.94
CPNE1-213ENST00000434795 TMEM39AQ9NV64 488 aa20.9■□□□□ 0.94
CPNE1-213ENST00000434795 TAF6LQ9Y6J9 622 aa20.9■□□□□ 0.94
CPNE1-213ENST00000434795 MCM3APO60318 1980 aa20.9■□□□□ 0.94
CPNE1-213ENST00000434795 ARVCFO00192 962 aa20.89■□□□□ 0.93
CPNE1-213ENST00000434795 SHHQ15465 462 aa20.89■□□□□ 0.93
CPNE1-213ENST00000434795 STAG2Q8N3U4 1231 aa20.89■□□□□ 0.93
CPNE1-213ENST00000434795 AP5M1Q9H0R1 490 aa20.89■□□□□ 0.93
CPNE1-213ENST00000434795 LAMA2P24043 3122 aaKnown RBP20.89■□□□□ 0.93
CPNE1-213ENST00000434795 TRDNQ13061 729 aa20.88■□□□□ 0.93
CPNE1-213ENST00000434795 CDC37Q16543 378 aaPredicted RBP20.88■□□□□ 0.93
CPNE1-213ENST00000434795 FSCN1Q16658 493 aaKnown RBP20.88■□□□□ 0.93
CPNE1-213ENST00000434795 USH1GQ495M9 461 aa20.88■□□□□ 0.93
CPNE1-213ENST00000434795 DUSP28Q4G0W2 176 aa20.88■□□□□ 0.93
CPNE1-213ENST00000434795 TLK2Q86UE8 772 aa20.88■□□□□ 0.93
CPNE1-213ENST00000434795 DNERQ8NFT8 737 aa20.88■□□□□ 0.93
CPNE1-213ENST00000434795 PALM3A6NDB9 673 aaPredicted RBP20.87■□□□□ 0.93
CPNE1-213ENST00000434795 E7EWF7 191 aa20.87■□□□□ 0.93
CPNE1-213ENST00000434795 EDNRBP24530 442 aa20.87■□□□□ 0.93
CPNE1-213ENST00000434795 QRICH1Q2TAL8 776 aa20.87■□□□□ 0.93
CPNE1-213ENST00000434795 C9orf50Q5SZB4 431 aa20.87■□□□□ 0.93
CPNE1-213ENST00000434795 CXCL17Q6UXB2 119 aa20.87■□□□□ 0.93
CPNE1-213ENST00000434795 SLC43A3Q8NBI5 491 aa20.87■□□□□ 0.93
CPNE1-213ENST00000434795 WDR11Q9BZH6 1224 aa20.87■□□□□ 0.93
CPNE1-213ENST00000434795 MAD2L2Q9UI95 211 aa20.87■□□□□ 0.93
CPNE1-213ENST00000434795 A0A0U1RQG5 324 aaPredicted RBP20.86■□□□□ 0.93
CPNE1-213ENST00000434795 KLRF2D3W0D1 207 aa20.86■□□□□ 0.93
CPNE1-213ENST00000434795 CABYRO75952 493 aa20.86■□□□□ 0.93
CPNE1-213ENST00000434795 RAG1P15918 1043 aa20.86■□□□□ 0.93
CPNE1-213ENST00000434795 STOX1Q6ZVD7 989 aa20.86■□□□□ 0.93
CPNE1-213ENST00000434795 MTMR8Q96EF0 704 aa20.86■□□□□ 0.93
CPNE1-213ENST00000434795 SENP2Q9HC62 589 aa20.86■□□□□ 0.93
CPNE1-213ENST00000434795 GRIN2DO15399 1336 aa20.85■□□□□ 0.93
CPNE1-213ENST00000434795 ABCB11O95342 1321 aa20.85■□□□□ 0.93
CPNE1-213ENST00000434795 IFIT3O14879 490 aaKnown RBP20.85■□□□□ 0.93
CPNE1-213ENST00000434795 TIMP1P01033 207 aa20.85■□□□□ 0.93
CPNE1-213ENST00000434795 EPHB4P54760 987 aa20.85■□□□□ 0.93
CPNE1-213ENST00000434795 FBXO11Q86XK2 927 aa20.85■□□□□ 0.93
CPNE1-213ENST00000434795 DEFB123Q8N688 67 aa20.85■□□□□ 0.93
CPNE1-213ENST00000434795 NCOA7Q8NI08 942 aa20.85■□□□□ 0.93
CPNE1-213ENST00000434795 SYTL5Q8TDW5 730 aaPredicted RBP20.85■□□□□ 0.93
CPNE1-213ENST00000434795 TAAR1Q96RJ0 339 aa20.85■□□□□ 0.93
CPNE1-213ENST00000434795 TBX21Q9UL17 535 aa20.85■□□□□ 0.93
CPNE1-213ENST00000434795 MROH7Q68CQ1 1323 aa20.84■□□□□ 0.93
CPNE1-213ENST00000434795 LAMA4Q16363 1823 aa20.84■□□□□ 0.93
CPNE1-213ENST00000434795 ZEB2O60315 1214 aa20.84■□□□□ 0.93
CPNE1-213ENST00000434795 CD4P01730 458 aa20.84■□□□□ 0.93
CPNE1-213ENST00000434795 PDE4DQ08499 809 aa20.84■□□□□ 0.93
CPNE1-213ENST00000434795 SLC35G1Q2M3R5 365 aa20.84■□□□□ 0.93
CPNE1-213ENST00000434795 Q7L0L9 218 aa20.84■□□□□ 0.93
CPNE1-213ENST00000434795 CHST3Q7LGC8 479 aa20.84■□□□□ 0.93
CPNE1-213ENST00000434795 MCF2L2Q86YR7 1114 aa20.84■□□□□ 0.93
CPNE1-213ENST00000434795 FAM126BQ8IXS8 530 aa20.84■□□□□ 0.93
CPNE1-213ENST00000434795 IGDCC4Q8TDY8 1250 aa20.84■□□□□ 0.93
CPNE1-213ENST00000434795 MRPL11Q9Y3B7 192 aaKnown RBP20.84■□□□□ 0.93
CPNE1-213ENST00000434795 B4DLN1 442 aa20.83■□□□□ 0.93
CPNE1-213ENST00000434795 DHX16O60231 1041 aaKnown RBP20.83■□□□□ 0.93
CPNE1-213ENST00000434795 MRPL12P52815 198 aaKnown RBP20.83■□□□□ 0.93
CPNE1-213ENST00000434795 ITGA7Q13683 1181 aa20.83■□□□□ 0.93
CPNE1-213ENST00000434795 MPHOSPH6Q99547 160 aaKnown RBP20.83■□□□□ 0.93
CPNE1-213ENST00000434795 COL20A1Q9P218 1284 aa20.83■□□□□ 0.93
CPNE1-213ENST00000434795 RBM8AQ9Y5S9 174 aaKnown RBP20.83■□□□□ 0.93
CPNE1-213ENST00000434795 PPP1R11O60927 126 aaPredicted RBP20.82■□□□□ 0.92
CPNE1-213ENST00000434795 ANTXR2P58335 489 aa20.82■□□□□ 0.92
CPNE1-213ENST00000434795 TROAPQ12815 778 aa20.82■□□□□ 0.92
CPNE1-213ENST00000434795 GRM4Q14833 912 aa20.82■□□□□ 0.92
CPNE1-213ENST00000434795 FAM109BQ6ICB4 259 aaPredicted RBP20.82■□□□□ 0.92
CPNE1-213ENST00000434795 AMNQ9BXJ7 453 aa20.82■□□□□ 0.92
CPNE1-213ENST00000434795 SEZ6LQ9BYH1 1024 aa20.82■□□□□ 0.92
CPNE1-213ENST00000434795 LSG1Q9H089 658 aaKnown RBP20.82■□□□□ 0.92
CPNE1-213ENST00000434795 RIOX1Q9H6W3 641 aa20.82■□□□□ 0.92
CPNE1-213ENST00000434795 MTMR10Q9NXD2 777 aa20.82■□□□□ 0.92
CPNE1-213ENST00000434795 LCTP09848 1927 aa20.82■□□□□ 0.92
CPNE1-213ENST00000434795 OPLAHO14841 1288 aa20.81■□□□□ 0.92
CPNE1-213ENST00000434795 ZBTB5O15062 677 aa20.81■□□□□ 0.92
CPNE1-213ENST00000434795 FPGSQ05932 587 aa20.81■□□□□ 0.92
CPNE1-213ENST00000434795 MFSD5Q6N075 450 aa20.81■□□□□ 0.92
CPNE1-213ENST00000434795 RALYLQ86SE5 291 aaKnown RBP20.81■□□□□ 0.92
CPNE1-213ENST00000434795 MB21D2Q8IYB1 491 aaPredicted RBP20.81■□□□□ 0.92
CPNE1-213ENST00000434795 NSUN6Q8TEA1 469 aaKnown RBP20.81■□□□□ 0.92
CPNE1-213ENST00000434795 SCFD2Q8WU76 684 aa20.81■□□□□ 0.92
CPNE1-213ENST00000434795 IWS1Q96ST2 819 aa20.81■□□□□ 0.92
CPNE1-213ENST00000434795 ERICH2A1L162 156 aa20.8■□□□□ 0.92
CPNE1-213ENST00000434795 NKRFO15226 690 aaKnown RBP eCLIP20.8■□□□□ 0.92
CPNE1-213ENST00000434795 PSMC6P62333 389 aa20.8■□□□□ 0.92
CPNE1-213ENST00000434795 WTAPQ15007 396 aa20.8■□□□□ 0.92
CPNE1-213ENST00000434795 CCDC62Q6P9F0 684 aa20.8■□□□□ 0.92
CPNE1-213ENST00000434795 C16orf59Q7L2K0 433 aa20.8■□□□□ 0.92
CPNE1-213ENST00000434795 SKAP1Q86WV1 359 aa20.8■□□□□ 0.92
CPNE1-213ENST00000434795 COPS5Q92905 334 aa20.8■□□□□ 0.92
CPNE1-213ENST00000434795 RMDN3Q96TC7 470 aa20.8■□□□□ 0.92
CPNE1-213ENST00000434795 ESYT1Q9BSJ8 1104 aa20.8■□□□□ 0.92
CPNE1-213ENST00000434795 LTBP2Q14767 1821 aa20.8■□□□□ 0.92
CPNE1-213ENST00000434795 TLR3O15455 904 aaKnown RBP20.79■□□□□ 0.92
CPNE1-213ENST00000434795 CYTH3O43739 400 aa20.79■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms