RNA–Protein interactions for RNA: ENST00000434760.5

NUP50-210, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 763 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-210ENST00000434760 PTPDC1A2A3K4 754 aa18.43■□□□□ 0.54
NUP50-210ENST00000434760 CDK7P50613 346 aa18.43■□□□□ 0.54
NUP50-210ENST00000434760 BEX3Q00994 111 aa18.43■□□□□ 0.54
NUP50-210ENST00000434760 USH1GQ495M9 461 aa18.43■□□□□ 0.54
NUP50-210ENST00000434760 C9orf50Q5SZB4 431 aa18.43■□□□□ 0.54
NUP50-210ENST00000434760 RNF207Q6ZRF8 634 aa18.43■□□□□ 0.54
NUP50-210ENST00000434760 STOX1Q6ZVD7 989 aa18.43■□□□□ 0.54
NUP50-210ENST00000434760 EEPD1Q7L9B9 569 aa18.43■□□□□ 0.54
NUP50-210ENST00000434760 ADGRF4Q8IZF3 695 aa18.43■□□□□ 0.54
NUP50-210ENST00000434760 RUFY2Q8WXA3 655 aa18.43■□□□□ 0.54
NUP50-210ENST00000434760 GLT1D1Q96MS3 346 aa18.43■□□□□ 0.54
NUP50-210ENST00000434760 SPC25Q9HBM1 224 aa18.43■□□□□ 0.54
NUP50-210ENST00000434760 ADD3Q9UEY8 706 aaKnown RBP18.43■□□□□ 0.54
NUP50-210ENST00000434760 SLC35G1Q2M3R5 365 aa18.42■□□□□ 0.54
NUP50-210ENST00000434760 GNASQ5JWF2 1037 aa18.42■□□□□ 0.54
NUP50-210ENST00000434760 IFIT1BQ5T764 474 aaKnown RBP18.42■□□□□ 0.54
NUP50-210ENST00000434760 RBM47A0AV96 593 aaKnown RBP18.41■□□□□ 0.54
NUP50-210ENST00000434760 PARP1P09874 1014 aaKnown RBP18.41■□□□□ 0.54
NUP50-210ENST00000434760 CALML3P27482 149 aa18.41■□□□□ 0.54
NUP50-210ENST00000434760 EPHB4P54760 987 aa18.41■□□□□ 0.54
NUP50-210ENST00000434760 FSCN1Q16658 493 aaKnown RBP18.41■□□□□ 0.54
NUP50-210ENST00000434760 QRICH1Q2TAL8 776 aa18.41■□□□□ 0.54
NUP50-210ENST00000434760 FAM126BQ8IXS8 530 aa18.41■□□□□ 0.54
NUP50-210ENST00000434760 STAG2Q8N3U4 1231 aa18.41■□□□□ 0.54
NUP50-210ENST00000434760 JMJD4Q9H9V9 463 aa18.41■□□□□ 0.54
NUP50-210ENST00000434760 SENP2Q9HC62 589 aa18.41■□□□□ 0.54
NUP50-210ENST00000434760 U3KPZ7 1027 aaPredicted RBP18.41■□□□□ 0.54
NUP50-210ENST00000434760 MROH7Q68CQ1 1323 aa18.41■□□□□ 0.54
NUP50-210ENST00000434760 CHD7Q9P2D1 2997 aa18.41■□□□□ 0.54
NUP50-210ENST00000434760 A0A0U1RQG5 324 aaPredicted RBP18.4■□□□□ 0.54
NUP50-210ENST00000434760 OPLAHO14841 1288 aa18.4■□□□□ 0.54
NUP50-210ENST00000434760 ANTXR2P58335 489 aa18.4■□□□□ 0.54
NUP50-210ENST00000434760 SHHQ15465 462 aa18.4■□□□□ 0.54
NUP50-210ENST00000434760 DUSP28Q4G0W2 176 aa18.4■□□□□ 0.54
NUP50-210ENST00000434760 IQSEC1Q6DN90 963 aa18.4■□□□□ 0.54
NUP50-210ENST00000434760 CXCL17Q6UXB2 119 aa18.4■□□□□ 0.54
NUP50-210ENST00000434760 Q7L0L9 218 aa18.4■□□□□ 0.54
NUP50-210ENST00000434760 SLC43A3Q8NBI5 491 aa18.4■□□□□ 0.54
NUP50-210ENST00000434760 RGS22Q8NE09 1264 aa18.4■□□□□ 0.54
NUP50-210ENST00000434760 DNERQ8NFT8 737 aa18.4■□□□□ 0.54
NUP50-210ENST00000434760 MTMR8Q96EF0 704 aa18.4■□□□□ 0.54
NUP50-210ENST00000434760 COL20A1Q9P218 1284 aa18.4■□□□□ 0.54
NUP50-210ENST00000434760 MAD2L2Q9UI95 211 aa18.4■□□□□ 0.54
NUP50-210ENST00000434760 Q9Y3F1 56 aa18.4■□□□□ 0.54
NUP50-210ENST00000434760 GRIN2DO15399 1336 aa18.4■□□□□ 0.54
NUP50-210ENST00000434760 ABCB11O95342 1321 aa18.4■□□□□ 0.54
NUP50-210ENST00000434760 GBF1Q92538 1859 aa18.39■□□□□ 0.54
NUP50-210ENST00000434760 E7EWF7 191 aa18.39■□□□□ 0.53
NUP50-210ENST00000434760 ARVCFO00192 962 aa18.39■□□□□ 0.53
NUP50-210ENST00000434760 PPP1R11O60927 126 aaPredicted RBP18.39■□□□□ 0.53
NUP50-210ENST00000434760 GHRHRQ02643 423 aa18.39■□□□□ 0.53
NUP50-210ENST00000434760 MB21D2Q8IYB1 491 aaPredicted RBP18.39■□□□□ 0.53
NUP50-210ENST00000434760 MAP4K1Q92918 833 aa18.39■□□□□ 0.53
NUP50-210ENST00000434760 MAF1Q9H063 256 aa18.39■□□□□ 0.53
NUP50-210ENST00000434760 PALM3A6NDB9 673 aaPredicted RBP18.38■□□□□ 0.53
NUP50-210ENST00000434760 DCDC2CA8MYV0 355 aa18.38■□□□□ 0.53
NUP50-210ENST00000434760 CD4P01730 458 aa18.38■□□□□ 0.53
NUP50-210ENST00000434760 GRM4Q14833 912 aa18.38■□□□□ 0.53
NUP50-210ENST00000434760 KIAA1211Q6ZU35 1233 aa18.38■□□□□ 0.53
NUP50-210ENST00000434760 NOL8Q76FK4 1167 aaKnown RBP18.38■□□□□ 0.53
NUP50-210ENST00000434760 SKAP1Q86WV1 359 aa18.38■□□□□ 0.53
NUP50-210ENST00000434760 SYTL5Q8TDW5 730 aaPredicted RBP18.38■□□□□ 0.53
NUP50-210ENST00000434760 TBC1D5Q92609 795 aa18.38■□□□□ 0.53
NUP50-210ENST00000434760 TMEM39AQ9NV64 488 aa18.38■□□□□ 0.53
NUP50-210ENST00000434760 RBM8AQ9Y5S9 174 aaKnown RBP18.38■□□□□ 0.53
NUP50-210ENST00000434760 DYNC1LI2O43237 492 aaPredicted RBP18.37■□□□□ 0.53
NUP50-210ENST00000434760 RAG1P15918 1043 aa18.37■□□□□ 0.53
NUP50-210ENST00000434760 COL9A3Q14050 684 aaPredicted RBP18.37■□□□□ 0.53
NUP50-210ENST00000434760 DEFB123Q8N688 67 aa18.37■□□□□ 0.53
NUP50-210ENST00000434760 WDR11Q9BZH6 1224 aa18.37■□□□□ 0.53
NUP50-210ENST00000434760 LSG1Q9H089 658 aaKnown RBP18.37■□□□□ 0.53
NUP50-210ENST00000434760 AP5M1Q9H0R1 490 aa18.37■□□□□ 0.53
NUP50-210ENST00000434760 MYH7BA7E2Y1 1941 aa18.37■□□□□ 0.53
NUP50-210ENST00000434760 SCN5AQ14524 2016 aa18.37■□□□□ 0.53
NUP50-210ENST00000434760 KLRF2D3W0D1 207 aa18.36■□□□□ 0.53
NUP50-210ENST00000434760 CABYRO75952 493 aa18.36■□□□□ 0.53
NUP50-210ENST00000434760 ARIH2O95376 493 aa18.36■□□□□ 0.53
NUP50-210ENST00000434760 FPGSQ05932 587 aa18.36■□□□□ 0.53
NUP50-210ENST00000434760 PDE4DQ08499 809 aa18.36■□□□□ 0.53
NUP50-210ENST00000434760 TROAPQ12815 778 aa18.36■□□□□ 0.53
NUP50-210ENST00000434760 TRDNQ13061 729 aa18.36■□□□□ 0.53
NUP50-210ENST00000434760 RALYLQ86SE5 291 aaKnown RBP18.36■□□□□ 0.53
NUP50-210ENST00000434760 FBXO11Q86XK2 927 aa18.36■□□□□ 0.53
NUP50-210ENST00000434760 NCOA7Q8NI08 942 aa18.36■□□□□ 0.53
NUP50-210ENST00000434760 MTMR10Q9NXD2 777 aa18.36■□□□□ 0.53
NUP50-210ENST00000434760 CYTH3O43739 400 aa18.35■□□□□ 0.53
NUP50-210ENST00000434760 DHX16O60231 1041 aaKnown RBP18.35■□□□□ 0.53
NUP50-210ENST00000434760 TIMP1P01033 207 aa18.35■□□□□ 0.53
NUP50-210ENST00000434760 PPP2R5BQ15173 497 aa18.35■□□□□ 0.53
NUP50-210ENST00000434760 CHST3Q7LGC8 479 aa18.35■□□□□ 0.53
NUP50-210ENST00000434760 SCFD2Q8WU76 684 aa18.35■□□□□ 0.53
NUP50-210ENST00000434760 ESYT1Q9BSJ8 1104 aa18.35■□□□□ 0.53
NUP50-210ENST00000434760 IFIT3O14879 490 aaKnown RBP18.34■□□□□ 0.53
NUP50-210ENST00000434760 ZBTB5O15062 677 aa18.34■□□□□ 0.53
NUP50-210ENST00000434760 HSD17B4P51659 736 aa18.34■□□□□ 0.53
NUP50-210ENST00000434760 PSMC6P62333 389 aa18.34■□□□□ 0.53
NUP50-210ENST00000434760 PURAQ00577 322 aaKnown RBP18.34■□□□□ 0.53
NUP50-210ENST00000434760 ITGA7Q13683 1181 aa18.34■□□□□ 0.53
NUP50-210ENST00000434760 FAM109BQ6ICB4 259 aaPredicted RBP18.34■□□□□ 0.53
NUP50-210ENST00000434760 COPS5Q92905 334 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms