RNA–Protein interactions for RNA: ENST00000433496.5

RFC4-207, Transcript of replication factor C subunit 4, humanhuman

TSL 5 BASIC

Gene RFC4, Length 1,111 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-207ENST00000433496 ANKS1AQ92625 1134 aa11.26□□□□□ -0.61
RFC4-207ENST00000433496 TOX2Q96NM4 488 aa11.26□□□□□ -0.61
RFC4-207ENST00000433496 UBA5Q9GZZ9 404 aa11.26□□□□□ -0.61
RFC4-207ENST00000433496 KATNBL1Q9H079 304 aa11.26□□□□□ -0.61
RFC4-207ENST00000433496 ABCB11O95342 1321 aa11.26□□□□□ -0.61
RFC4-207ENST00000433496 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.25□□□□□ -0.61
RFC4-207ENST00000433496 TRIM43BA6NCK2 446 aa11.25□□□□□ -0.61
RFC4-207ENST00000433496 KIAA0355O15063 1070 aa11.25□□□□□ -0.61
RFC4-207ENST00000433496 DYNC1LI2O43237 492 aaPredicted RBP11.25□□□□□ -0.61
RFC4-207ENST00000433496 SMPD1P17405 629 aa11.25□□□□□ -0.61
RFC4-207ENST00000433496 BEX3Q00994 111 aa11.25□□□□□ -0.61
RFC4-207ENST00000433496 FPGSQ05932 587 aa11.25□□□□□ -0.61
RFC4-207ENST00000433496 BRDTQ58F21 947 aaPredicted RBP11.25□□□□□ -0.61
RFC4-207ENST00000433496 CCSAPQ6IQ19 270 aaPredicted RBP11.25□□□□□ -0.61
RFC4-207ENST00000433496 SH3RF1Q7Z6J0 888 aa11.25□□□□□ -0.61
RFC4-207ENST00000433496 MCF2L2Q86YR7 1114 aa11.25□□□□□ -0.61
RFC4-207ENST00000433496 ADGRF4Q8IZF3 695 aa11.25□□□□□ -0.61
RFC4-207ENST00000433496 DNERQ8NFT8 737 aa11.25□□□□□ -0.61
RFC4-207ENST00000433496 CLEC4DQ8WXI8 215 aa11.25□□□□□ -0.61
RFC4-207ENST00000433496 TRIM43Q96BQ3 446 aaPredicted RBP11.25□□□□□ -0.61
RFC4-207ENST00000433496 Q9Y3F1 56 aa11.25□□□□□ -0.61
RFC4-207ENST00000433496 ASTN1O14525 1302 aa11.25□□□□□ -0.61
RFC4-207ENST00000433496 ARVCFO00192 962 aa11.24□□□□□ -0.61
RFC4-207ENST00000433496 CPT1AP50416 773 aa11.24□□□□□ -0.61
RFC4-207ENST00000433496 RPS6P62753 249 aaKnown RBP11.24□□□□□ -0.61
RFC4-207ENST00000433496 PPP2R5BQ15173 497 aa11.24□□□□□ -0.61
RFC4-207ENST00000433496 CXCL17Q6UXB2 119 aa11.24□□□□□ -0.61
RFC4-207ENST00000433496 FBXO11Q86XK2 927 aa11.24□□□□□ -0.61
RFC4-207ENST00000433496 NCOA7Q8NI08 942 aa11.24□□□□□ -0.61
RFC4-207ENST00000433496 MORC4Q8TE76 937 aa11.24□□□□□ -0.61
RFC4-207ENST00000433496 PURBQ96QR8 312 aaKnown RBP11.24□□□□□ -0.61
RFC4-207ENST00000433496 SEZ6LQ9BYH1 1024 aa11.24□□□□□ -0.61
RFC4-207ENST00000433496 WDR11Q9BZH6 1224 aa11.24□□□□□ -0.61
RFC4-207ENST00000433496 MAF1Q9H063 256 aa11.24□□□□□ -0.61
RFC4-207ENST00000433496 IL25Q9H293 177 aa11.24□□□□□ -0.61
RFC4-207ENST00000433496 CPVLQ9H3G5 476 aa11.24□□□□□ -0.61
RFC4-207ENST00000433496 VAT1LQ9HCJ6 419 aa11.24□□□□□ -0.61
RFC4-207ENST00000433496 GPHNQ9NQX3 736 aaPredicted RBP11.24□□□□□ -0.61
RFC4-207ENST00000433496 PDGFCQ9NRA1 345 aa11.24□□□□□ -0.61
RFC4-207ENST00000433496 GNEQ9Y223 722 aaKnown RBP11.24□□□□□ -0.61
RFC4-207ENST00000433496 MRPL11Q9Y3B7 192 aaKnown RBP11.24□□□□□ -0.61
RFC4-207ENST00000433496 DDX49Q9Y6V7 483 aaKnown RBP11.24□□□□□ -0.61
RFC4-207ENST00000433496 BAZ2BQ9UIF8 2168 aaKnown RBP11.23□□□□□ -0.61
RFC4-207ENST00000433496 LAMA3Q16787 3333 aa11.23□□□□□ -0.61
RFC4-207ENST00000433496 KLRF2D3W0D1 207 aa11.23□□□□□ -0.61
RFC4-207ENST00000433496 IFIT3O14879 490 aaKnown RBP11.23□□□□□ -0.61
RFC4-207ENST00000433496 NKRFO15226 690 aaKnown RBP eCLIP11.23□□□□□ -0.61
RFC4-207ENST00000433496 SGSM2O43147 1006 aa11.23□□□□□ -0.61
RFC4-207ENST00000433496 CYP21A2P08686 494 aa11.23□□□□□ -0.61
RFC4-207ENST00000433496 NKX3-2P78367 333 aa11.23□□□□□ -0.61
RFC4-207ENST00000433496 IRX5P78411 483 aaPredicted RBP11.23□□□□□ -0.61
RFC4-207ENST00000433496 FAAP100Q0VG06 881 aa11.23□□□□□ -0.61
RFC4-207ENST00000433496 TRAF1Q13077 416 aa11.23□□□□□ -0.61
RFC4-207ENST00000433496 WTAPQ15007 396 aa11.23□□□□□ -0.61
RFC4-207ENST00000433496 SHHQ15465 462 aa11.23□□□□□ -0.61
RFC4-207ENST00000433496 QRICH1Q2TAL8 776 aa11.23□□□□□ -0.61
RFC4-207ENST00000433496 DUSP28Q4G0W2 176 aa11.23□□□□□ -0.61
RFC4-207ENST00000433496 TAPT1Q6NXT6 567 aa11.23□□□□□ -0.61
RFC4-207ENST00000433496 RGS22Q8NE09 1264 aa11.23□□□□□ -0.61
RFC4-207ENST00000433496 OR6J1Q8NGC5 347 aa11.23□□□□□ -0.61
RFC4-207ENST00000433496 SCFD2Q8WU76 684 aa11.23□□□□□ -0.61
RFC4-207ENST00000433496 RNPC3Q96LT9 517 aaKnown RBP11.23□□□□□ -0.61
RFC4-207ENST00000433496 AMNQ9BXJ7 453 aa11.23□□□□□ -0.61
RFC4-207ENST00000433496 POLR3EQ9NVU0 708 aa11.23□□□□□ -0.61
RFC4-207ENST00000433496 MYH7BA7E2Y1 1941 aa11.23□□□□□ -0.61
RFC4-207ENST00000433496 TIMP1P01033 207 aa11.22□□□□□ -0.61
RFC4-207ENST00000433496 PTH1RQ03431 593 aa11.22□□□□□ -0.61
RFC4-207ENST00000433496 PPIGQ13427 754 aaKnown RBP eCLIP11.22□□□□□ -0.613e-7■■□□□ 11.7
RFC4-207ENST00000433496 ITGA7Q13683 1181 aa11.22□□□□□ -0.61
RFC4-207ENST00000433496 TTLL4Q14679 1199 aa11.22□□□□□ -0.61
RFC4-207ENST00000433496 C9orf50Q5SZB4 431 aa11.22□□□□□ -0.61
RFC4-207ENST00000433496 SZT2Q5T011 3432 aa11.22□□□□□ -0.61
RFC4-207ENST00000433496 ZNF697Q5TEC3 545 aa11.22□□□□□ -0.61
RFC4-207ENST00000433496 CYB5R4Q7L1T6 521 aa11.22□□□□□ -0.61
RFC4-207ENST00000433496 CATIPQ7Z7H3 387 aa11.22□□□□□ -0.61
RFC4-207ENST00000433496 TMEM199Q8N511 208 aa11.22□□□□□ -0.61
RFC4-207ENST00000433496 NSUN6Q8TEA1 469 aaKnown RBP11.22□□□□□ -0.61
RFC4-207ENST00000433496 E7EWF7 191 aa11.21□□□□□ -0.61
RFC4-207ENST00000433496 CTAGE5O15320 804 aa11.21□□□□□ -0.61
RFC4-207ENST00000433496 MYL3P08590 195 aa11.21□□□□□ -0.61
RFC4-207ENST00000433496 TXNP10599 105 aaKnown RBP11.21□□□□□ -0.61
RFC4-207ENST00000433496 CDK7P50613 346 aa11.21□□□□□ -0.61
RFC4-207ENST00000433496 SEC23AQ15436 765 aa11.21□□□□□ -0.61
RFC4-207ENST00000433496 TMEM67Q5HYA8 995 aa11.21□□□□□ -0.61
RFC4-207ENST00000433496 ARHGEF16Q5VV41 709 aa11.21□□□□□ -0.61
RFC4-207ENST00000433496 CASC1Q6TDU7 716 aa11.21□□□□□ -0.61
RFC4-207ENST00000433496 Q7L0L9 218 aa11.21□□□□□ -0.61
RFC4-207ENST00000433496 HOMER1Q86YM7 354 aa11.21□□□□□ -0.61
RFC4-207ENST00000433496 FAM126BQ8IXS8 530 aa11.21□□□□□ -0.61
RFC4-207ENST00000433496 RMDN3Q96TC7 470 aa11.21□□□□□ -0.61
RFC4-207ENST00000433496 PPP1R12CQ9BZL4 782 aa11.21□□□□□ -0.61
RFC4-207ENST00000433496 JMJD4Q9H9V9 463 aa11.21□□□□□ -0.61
RFC4-207ENST00000433496 TBX21Q9UL17 535 aa11.21□□□□□ -0.61
RFC4-207ENST00000433496 RBM8AQ9Y5S9 174 aaKnown RBP11.21□□□□□ -0.61
RFC4-207ENST00000433496 SCN10AQ9Y5Y9 1956 aa11.2□□□□□ -0.62
RFC4-207ENST00000433496 RBM47A0AV96 593 aaKnown RBP11.2□□□□□ -0.62
RFC4-207ENST00000433496 ZBTB5O15062 677 aa11.2□□□□□ -0.62
RFC4-207ENST00000433496 KPNA6O60684 536 aa11.2□□□□□ -0.62
RFC4-207ENST00000433496 CFBP00751 764 aa11.2□□□□□ -0.62
RFC4-207ENST00000433496 EDNRBP24530 442 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms