RNA–Protein interactions for RNA: ENST00000433224.1

LRRTM1-206, Transcript of leucine rich repeat transmembrane neuronal 1, humanhuman

TSL 1 (best)

Gene LRRTM1, Length 4,023 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1-206ENST00000433224 KLRC3Q07444 240 aa13.87□□□□□ -0.19
LRRTM1-206ENST00000433224 GRIK5Q16478 980 aa13.87□□□□□ -0.19
LRRTM1-206ENST00000433224 TAX1BP1Q86VP1 789 aa13.87□□□□□ -0.19
LRRTM1-206ENST00000433224 SMCR8Q8TEV9 937 aaPredicted RBP13.87□□□□□ -0.19
LRRTM1-206ENST00000433224 VTI1AQ96AJ9 217 aa13.87□□□□□ -0.19
LRRTM1-206ENST00000433224 KCNQ5Q9NR82 932 aa13.87□□□□□ -0.19
LRRTM1-206ENST00000433224 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.87□□□□□ -0.19
LRRTM1-206ENST00000433224 PTPREP23469 700 aa13.86□□□□□ -0.19
LRRTM1-206ENST00000433224 MCM3P25205 808 aa13.86□□□□□ -0.19
LRRTM1-206ENST00000433224 GYS2P54840 703 aa13.86□□□□□ -0.19
LRRTM1-206ENST00000433224 TERF2Q15554 542 aa13.86□□□□□ -0.19
LRRTM1-206ENST00000433224 PFKFB3Q16875 520 aaPredicted RBP13.86□□□□□ -0.19
LRRTM1-206ENST00000433224 SULF1Q8IWU6 871 aa13.86□□□□□ -0.19
LRRTM1-206ENST00000433224 FMR1NBQ8N0W7 255 aaPredicted RBP13.86□□□□□ -0.19
LRRTM1-206ENST00000433224 MICALL1Q8N3F8 863 aa13.86□□□□□ -0.19
LRRTM1-206ENST00000433224 SWAP70Q9UH65 585 aa13.86□□□□□ -0.19
LRRTM1-206ENST00000433224 EXOC3O60645 756 aa13.86□□□□□ -0.19
LRRTM1-206ENST00000433224 IVLP07476 585 aa13.86□□□□□ -0.19
LRRTM1-206ENST00000433224 BIRC3Q13489 604 aa13.86□□□□□ -0.19
LRRTM1-206ENST00000433224 CUL4BQ13620 913 aa13.86□□□□□ -0.19
LRRTM1-206ENST00000433224 RRAGAQ7L523 313 aa13.86□□□□□ -0.19
LRRTM1-206ENST00000433224 LRP10Q7Z4F1 713 aa13.86□□□□□ -0.19
LRRTM1-206ENST00000433224 ANKRD35Q8N283 1001 aa13.86□□□□□ -0.19
LRRTM1-206ENST00000433224 ALS2CR12Q96Q35 445 aa13.86□□□□□ -0.19
LRRTM1-206ENST00000433224 SH2D3AQ9BRG2 576 aa13.86□□□□□ -0.19
LRRTM1-206ENST00000433224 CSADQ9Y600 493 aa13.86□□□□□ -0.19
LRRTM1-206ENST00000433224 GTPBP6O43824 516 aaPredicted RBP13.86□□□□□ -0.19
LRRTM1-206ENST00000433224 TDP2O95551 362 aa13.86□□□□□ -0.19
LRRTM1-206ENST00000433224 TYW1BQ6NUM6 668 aa13.86□□□□□ -0.19
LRRTM1-206ENST00000433224 MNAT1P51948 309 aa13.85□□□□□ -0.19
LRRTM1-206ENST00000433224 ARHGEF16Q5VV41 709 aa13.85□□□□□ -0.19
LRRTM1-206ENST00000433224 CDC42EP5Q6NZY7 148 aa13.85□□□□□ -0.19
LRRTM1-206ENST00000433224 DHX36Q9H2U1 1008 aaKnown RBP13.85□□□□□ -0.19
LRRTM1-206ENST00000433224 ZBTB22O15209 634 aa13.85□□□□□ -0.19
LRRTM1-206ENST00000433224 ATP2C2O75185 946 aa13.85□□□□□ -0.19
LRRTM1-206ENST00000433224 STAT2P52630 851 aa13.85□□□□□ -0.19
LRRTM1-206ENST00000433224 ARHGAP44Q17R89 818 aa13.85□□□□□ -0.19
LRRTM1-206ENST00000433224 PAGE5Q96GU1 130 aa13.85□□□□□ -0.19
LRRTM1-206ENST00000433224 NAPGQ99747 312 aaPredicted RBP13.85□□□□□ -0.19
LRRTM1-206ENST00000433224 ZCCHC17Q9NP64 241 aaKnown RBP13.85□□□□□ -0.19
LRRTM1-206ENST00000433224 LONP1P36776 959 aaKnown RBP13.85□□□□□ -0.19
LRRTM1-206ENST00000433224 MIER3Q7Z3K6 550 aa13.85□□□□□ -0.19
LRRTM1-206ENST00000433224 MAATS1Q7Z4T9 603 aa13.85□□□□□ -0.19
LRRTM1-206ENST00000433224 NCAPG2Q86XI2 1143 aa13.85□□□□□ -0.19
LRRTM1-206ENST00000433224 HPS3Q969F9 1004 aa13.85□□□□□ -0.19
LRRTM1-206ENST00000433224 PNMA6AP0CW24 399 aaPredicted RBP13.84□□□□□ -0.19
LRRTM1-206ENST00000433224 FAM26FQ5R3K3 315 aa13.84□□□□□ -0.19
LRRTM1-206ENST00000433224 SYDE2Q5VT97 1194 aa13.84□□□□□ -0.19
LRRTM1-206ENST00000433224 PANK4Q9NVE7 773 aa13.84□□□□□ -0.19
LRRTM1-206ENST00000433224 RFX7Q2KHR2 1363 aa13.84□□□□□ -0.19
LRRTM1-206ENST00000433224 TRIM49BA6NDI0 452 aa13.84□□□□□ -0.19
LRRTM1-206ENST00000433224 EFCAB8A8MWE9 144 aa13.84□□□□□ -0.19
LRRTM1-206ENST00000433224 B4DLN1 442 aa13.84□□□□□ -0.19
LRRTM1-206ENST00000433224 ZEB2O60315 1214 aa13.84□□□□□ -0.19
LRRTM1-206ENST00000433224 RASA1P20936 1047 aa13.84□□□□□ -0.19
LRRTM1-206ENST00000433224 GTF2A1P52655 376 aaPredicted RBP13.84□□□□□ -0.19
LRRTM1-206ENST00000433224 SPP2Q13103 211 aa13.84□□□□□ -0.19
LRRTM1-206ENST00000433224 LRCH2Q5VUJ6 765 aa13.84□□□□□ -0.19
LRRTM1-206ENST00000433224 NBPF11Q86T75 865 aa13.84□□□□□ -0.19
LRRTM1-206ENST00000433224 NLRX1Q86UT6 975 aa13.84□□□□□ -0.19
LRRTM1-206ENST00000433224 GPR161Q8N6U8 529 aaKnown RBP13.84□□□□□ -0.19
LRRTM1-206ENST00000433224 PIGOQ8TEQ8 1089 aa13.84□□□□□ -0.19
LRRTM1-206ENST00000433224 RIOK1Q9BRS2 568 aaKnown RBP13.84□□□□□ -0.19
LRRTM1-206ENST00000433224 NOP56O00567 594 aaKnown RBP13.84□□□□□ -0.19
LRRTM1-206ENST00000433224 KRT86O43790 486 aa13.84□□□□□ -0.19
LRRTM1-206ENST00000433224 DDR1Q08345 913 aa13.84□□□□□ -0.19
LRRTM1-206ENST00000433224 QRICH1Q2TAL8 776 aa13.84□□□□□ -0.19
LRRTM1-206ENST00000433224 NEDD1Q8NHV4 660 aa13.84□□□□□ -0.19
LRRTM1-206ENST00000433224 LARP4BQ92615 738 aaKnown RBP13.84□□□□□ -0.19
LRRTM1-206ENST00000433224 CCDC127Q96BQ5 260 aa13.84□□□□□ -0.19
LRRTM1-206ENST00000433224 CLIC2O15247 247 aa13.83□□□□□ -0.19
LRRTM1-206ENST00000433224 CASP14P31944 242 aa13.83□□□□□ -0.19
LRRTM1-206ENST00000433224 POTEDQ86YR6 584 aa13.83□□□□□ -0.19
LRRTM1-206ENST00000433224 FOXP4Q8IVH2 680 aaPredicted RBP13.83□□□□□ -0.19
LRRTM1-206ENST00000433224 RTKN2Q8IZC4 609 aa13.83□□□□□ -0.19
LRRTM1-206ENST00000433224 ADGRF4Q8IZF3 695 aa13.83□□□□□ -0.19
LRRTM1-206ENST00000433224 MYOCDQ8IZQ8 938 aa13.83□□□□□ -0.19
LRRTM1-206ENST00000433224 PAF1Q8N7H5 531 aa13.83□□□□□ -0.19
LRRTM1-206ENST00000433224 GLG1Q92896 1179 aa13.83□□□□□ -0.19
LRRTM1-206ENST00000433224 CRAMP1Q96RY5 1269 aa13.83□□□□□ -0.19
LRRTM1-206ENST00000433224 CCDC113Q9H0I3 377 aa13.83□□□□□ -0.19
LRRTM1-206ENST00000433224 GLT8D2Q9H1C3 349 aa13.83□□□□□ -0.19
LRRTM1-206ENST00000433224 SUGCTQ9HAC7 445 aa13.83□□□□□ -0.19
LRRTM1-206ENST00000433224 FRMD4BQ9Y2L6 1034 aa13.83□□□□□ -0.19
LRRTM1-206ENST00000433224 MRPL11Q9Y3B7 192 aaKnown RBP13.83□□□□□ -0.19
LRRTM1-206ENST00000433224 PIK3C2AO00443 1686 aa13.83□□□□□ -0.2
LRRTM1-206ENST00000433224 DPEP1P16444 411 aa13.83□□□□□ -0.2
LRRTM1-206ENST00000433224 RPL13P26373 211 aaKnown RBP13.83□□□□□ -0.2
LRRTM1-206ENST00000433224 SPATA1Q5VX52 437 aa13.83□□□□□ -0.2
LRRTM1-206ENST00000433224 EPB41P11171 864 aaKnown RBP13.83□□□□□ -0.2
LRRTM1-206ENST00000433224 STAT3P40763 770 aa13.83□□□□□ -0.2
LRRTM1-206ENST00000433224 XKR9Q5GH70 373 aa13.83□□□□□ -0.2
LRRTM1-206ENST00000433224 FAM102BQ5T8I3 360 aa13.83□□□□□ -0.2
LRRTM1-206ENST00000433224 TBC1D5Q92609 795 aa13.83□□□□□ -0.2
LRRTM1-206ENST00000433224 HOOK2Q96ED9 719 aa13.83□□□□□ -0.2
LRRTM1-206ENST00000433224 PDE11AQ9HCR9 933 aa13.83□□□□□ -0.2
LRRTM1-206ENST00000433224 KIF13AQ9H1H9 1805 aa13.82□□□□□ -0.2
LRRTM1-206ENST00000433224 PNMA6FA0A0J9YX94 578 aa13.82□□□□□ -0.2
LRRTM1-206ENST00000433224 CKAP4Q07065 602 aaKnown RBP13.82□□□□□ -0.2
LRRTM1-206ENST00000433224 CTTNQ14247 550 aaKnown RBP13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms