RNA–Protein interactions for RNA: ENST00000432012.1

NIPAL3-205, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best)

Gene NIPAL3, Length 2,714 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-205ENST00000432012 USHBP1Q8N6Y0 703 aa7.18□□□□□ -1.26
NIPAL3-205ENST00000432012 C2orf69Q8N8R5 385 aa7.18□□□□□ -1.26
NIPAL3-205ENST00000432012 CCDC89Q8N998 374 aa7.18□□□□□ -1.26
NIPAL3-205ENST00000432012 PHC3Q8NDX5 983 aa7.18□□□□□ -1.26
NIPAL3-205ENST00000432012 KCTD12Q96CX2 325 aaKnown RBP7.18□□□□□ -1.26
NIPAL3-205ENST00000432012 USP26Q9BXU7 913 aa7.18□□□□□ -1.26
NIPAL3-205ENST00000432012 KRTAP3-3Q9BYR6 98 aa7.18□□□□□ -1.26
NIPAL3-205ENST00000432012 KRTAP3-2Q9BYR7 98 aa7.18□□□□□ -1.26
NIPAL3-205ENST00000432012 FLT4P35916 1363 aa7.18□□□□□ -1.26
NIPAL3-205ENST00000432012 TJP1Q07157 1748 aa7.18□□□□□ -1.26
NIPAL3-205ENST00000432012 hCG_1642624A0A1W2PR95 340 aa7.18□□□□□ -1.26
NIPAL3-205ENST00000432012 GREM1O60565 184 aa7.18□□□□□ -1.26
NIPAL3-205ENST00000432012 IFIT2P09913 472 aaKnown RBP7.18□□□□□ -1.26
NIPAL3-205ENST00000432012 TXLNAP40222 546 aa7.18□□□□□ -1.26
NIPAL3-205ENST00000432012 EPHB1P54762 984 aa7.18□□□□□ -1.26
NIPAL3-205ENST00000432012 ST5P78524 1137 aa7.18□□□□□ -1.26
NIPAL3-205ENST00000432012 RTN1Q16799 776 aa7.18□□□□□ -1.26
NIPAL3-205ENST00000432012 TUBB8Q3ZCM7 444 aa7.18□□□□□ -1.26
NIPAL3-205ENST00000432012 CT47A1Q5JQC4 288 aaPredicted RBP7.18□□□□□ -1.26
NIPAL3-205ENST00000432012 TPH2Q8IWU9 490 aa7.18□□□□□ -1.26
NIPAL3-205ENST00000432012 IFNL3Q8IZI9 196 aa7.18□□□□□ -1.26
NIPAL3-205ENST00000432012 THUMPD2Q9BTF0 503 aaKnown RBP7.18□□□□□ -1.26
NIPAL3-205ENST00000432012 NT5C1AQ9BXI3 368 aa7.18□□□□□ -1.26
NIPAL3-205ENST00000432012 COL25A1Q9BXS0 654 aaPredicted RBP7.18□□□□□ -1.26
NIPAL3-205ENST00000432012 TRIM8Q9BZR9 551 aa7.18□□□□□ -1.26
NIPAL3-205ENST00000432012 API5Q9BZZ5 524 aaKnown RBP7.18□□□□□ -1.26
NIPAL3-205ENST00000432012 DCTPP1Q9H773 170 aa7.18□□□□□ -1.26
NIPAL3-205ENST00000432012 MRGBPQ9NV56 204 aa7.18□□□□□ -1.26
NIPAL3-205ENST00000432012 SLX4Q8IY92 1834 aa7.18□□□□□ -1.26
NIPAL3-205ENST00000432012 RHOBTB3O94955 611 aa7.17□□□□□ -1.26
NIPAL3-205ENST00000432012 F2P00734 622 aa7.17□□□□□ -1.26
NIPAL3-205ENST00000432012 ZNF853P0CG23 659 aa7.17□□□□□ -1.26
NIPAL3-205ENST00000432012 TNFAIP3P21580 790 aa7.17□□□□□ -1.26
NIPAL3-205ENST00000432012 PPM1FP49593 454 aaPredicted RBP7.17□□□□□ -1.26
NIPAL3-205ENST00000432012 FCGRTP55899 365 aa7.17□□□□□ -1.26
NIPAL3-205ENST00000432012 SSRP1Q08945 709 aaKnown RBP7.17□□□□□ -1.26
NIPAL3-205ENST00000432012 TWISTNBQ3B726 338 aaPredicted RBP7.17□□□□□ -1.26
NIPAL3-205ENST00000432012 TM4SF20Q53R12 229 aa7.17□□□□□ -1.26
NIPAL3-205ENST00000432012 BNC2Q6ZN30 1099 aaPredicted RBP7.17□□□□□ -1.26
NIPAL3-205ENST00000432012 LRP10Q7Z4F1 713 aa7.17□□□□□ -1.26
NIPAL3-205ENST00000432012 NIM1KQ8IY84 436 aa7.17□□□□□ -1.26
NIPAL3-205ENST00000432012 CLASRPQ8N2M8 674 aaKnown RBP7.17□□□□□ -1.26
NIPAL3-205ENST00000432012 PHACTR3Q96KR7 559 aa7.17□□□□□ -1.26
NIPAL3-205ENST00000432012 CHRDQ9H2X0 955 aa7.17□□□□□ -1.26
NIPAL3-205ENST00000432012 MBIPQ9NS73 344 aa7.17□□□□□ -1.26
NIPAL3-205ENST00000432012 ACTR10Q9NZ32 417 aa7.17□□□□□ -1.26
NIPAL3-205ENST00000432012 CARMIL3Q8ND23 1372 aa7.17□□□□□ -1.26
NIPAL3-205ENST00000432012 ELL2O00472 640 aaPredicted RBP7.17□□□□□ -1.26
NIPAL3-205ENST00000432012 MAN1A1P33908 653 aa7.17□□□□□ -1.26
NIPAL3-205ENST00000432012 GRIN2CQ14957 1233 aa7.17□□□□□ -1.26
NIPAL3-205ENST00000432012 PDXDC1Q6P996 788 aa7.17□□□□□ -1.26
NIPAL3-205ENST00000432012 C16orf54Q6UWD8 224 aa7.17□□□□□ -1.26
NIPAL3-205ENST00000432012 RELL1Q8IUW5 271 aa7.17□□□□□ -1.26
NIPAL3-205ENST00000432012 C1orf127Q8N9H9 656 aa7.17□□□□□ -1.26
NIPAL3-205ENST00000432012 ZNF516Q92618 1163 aa7.17□□□□□ -1.26
NIPAL3-205ENST00000432012 ZFYVE28Q9HCC9 887 aa7.17□□□□□ -1.26
NIPAL3-205ENST00000432012 FNIP2Q9P278 1114 aa7.17□□□□□ -1.26
NIPAL3-205ENST00000432012 STXBP5LQ9Y2K9 1186 aa7.17□□□□□ -1.26
NIPAL3-205ENST00000432012 POTEMA6NI47 508 aa7.16□□□□□ -1.26
NIPAL3-205ENST00000432012 DDAH1O94760 285 aa7.16□□□□□ -1.26
NIPAL3-205ENST00000432012 HMOX1P09601 288 aa7.16□□□□□ -1.26
NIPAL3-205ENST00000432012 INTS5Q6P9B9 1019 aaKnown RBP7.16□□□□□ -1.26
NIPAL3-205ENST00000432012 CASC1Q6TDU7 716 aa7.16□□□□□ -1.26
NIPAL3-205ENST00000432012 ZNF438Q7Z4V0 828 aa7.16□□□□□ -1.26
NIPAL3-205ENST00000432012 TTC16Q8NEE8 873 aa7.16□□□□□ -1.26
NIPAL3-205ENST00000432012 GPT2Q8TD30 523 aa7.16□□□□□ -1.26
NIPAL3-205ENST00000432012 THAP3Q8WTV1 239 aaPredicted RBP7.16□□□□□ -1.26
NIPAL3-205ENST00000432012 C7orf43Q8WVR3 580 aa7.16□□□□□ -1.26
NIPAL3-205ENST00000432012 HSH2DQ96JZ2 352 aa7.16□□□□□ -1.26
NIPAL3-205ENST00000432012 VPS33BQ9H267 617 aa7.16□□□□□ -1.26
NIPAL3-205ENST00000432012 POLKQ9UBT6 870 aa7.16□□□□□ -1.26
NIPAL3-205ENST00000432012 COL15A1P39059 1388 aa7.16□□□□□ -1.26
NIPAL3-205ENST00000432012 CACNA1SQ13698 1873 aa7.16□□□□□ -1.26
NIPAL3-205ENST00000432012 PLA2G5P39877 138 aa7.16□□□□□ -1.26
NIPAL3-205ENST00000432012 PTPN5P54829 565 aa7.16□□□□□ -1.26
NIPAL3-205ENST00000432012 ZGPATQ8N5A5 531 aaKnown RBP7.16□□□□□ -1.26
NIPAL3-205ENST00000432012 HOOK2Q96ED9 719 aa7.16□□□□□ -1.26
NIPAL3-205ENST00000432012 MAP7D2Q96T17 732 aa7.16□□□□□ -1.26
NIPAL3-205ENST00000432012 YIPF4Q9BSR8 244 aa7.16□□□□□ -1.26
NIPAL3-205ENST00000432012 STRIP2Q9ULQ0 834 aa7.16□□□□□ -1.26
NIPAL3-205ENST00000432012 AKAP2Q9Y2D5 859 aa7.16□□□□□ -1.26
NIPAL3-205ENST00000432012 ZKSCAN5Q9Y2L8 839 aa7.16□□□□□ -1.26
NIPAL3-205ENST00000432012 FCF1Q9Y324 198 aaKnown RBP7.16□□□□□ -1.26
NIPAL3-205ENST00000432012 PAPPA2Q9BXP8 1791 aa7.16□□□□□ -1.26
NIPAL3-205ENST00000432012 FKTNO75072 461 aa7.15□□□□□ -1.26
NIPAL3-205ENST00000432012 FAM153BP0C7A2 387 aa7.15□□□□□ -1.26
NIPAL3-205ENST00000432012 NPR1P16066 1061 aa7.15□□□□□ -1.26
NIPAL3-205ENST00000432012 CALRP27797 417 aaKnown RBP7.15□□□□□ -1.26
NIPAL3-205ENST00000432012 MCM5P33992 734 aa7.15□□□□□ -1.26
NIPAL3-205ENST00000432012 HALP42357 657 aa7.15□□□□□ -1.26
NIPAL3-205ENST00000432012 ZNF157P51786 506 aaPredicted RBP7.15□□□□□ -1.26
NIPAL3-205ENST00000432012 CABP4P57796 275 aa7.15□□□□□ -1.26
NIPAL3-205ENST00000432012 CAMK2GQ13555 558 aaPredicted RBP7.15□□□□□ -1.26
NIPAL3-205ENST00000432012 LRSAM1Q6UWE0 723 aa7.15□□□□□ -1.26
NIPAL3-205ENST00000432012 TRMT44Q8IYL2 757 aaKnown RBP7.15□□□□□ -1.26
NIPAL3-205ENST00000432012 SYNE4Q8N205 404 aa7.15□□□□□ -1.26
NIPAL3-205ENST00000432012 CHAC2Q8WUX2 184 aa7.15□□□□□ -1.26
NIPAL3-205ENST00000432012 CNNM2Q9H8M5 875 aa7.15□□□□□ -1.26
NIPAL3-205ENST00000432012 NGRNQ9NPE2 291 aaKnown RBP7.15□□□□□ -1.26
NIPAL3-205ENST00000432012 ZNF277Q9NRM2 450 aaPredicted RBP7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms