RNA–Protein interactions for RNA: ENST00000431803.2

CDC42-IT1-201, CDC42 intronic transcript 1, humanhuman

TSL 1 (best) BASIC

Gene CDC42-IT1, Length 692 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-IT1-201ENST00000431803 MOXD2PA6NHM9 499 aa11.13□□□□□ -0.63
CDC42-IT1-201ENST00000431803 TRIM6-TRIM34B2RNG4 842 aa11.13□□□□□ -0.63
CDC42-IT1-201ENST00000431803 FGAP02671 866 aa11.13□□□□□ -0.63
CDC42-IT1-201ENST00000431803 ACLYP53396 1101 aa11.13□□□□□ -0.63
CDC42-IT1-201ENST00000431803 TKFCQ3LXA3 575 aa11.13□□□□□ -0.63
CDC42-IT1-201ENST00000431803 MCMDC2Q4G0Z9 681 aa11.13□□□□□ -0.63
CDC42-IT1-201ENST00000431803 FAM109BQ6ICB4 259 aaPredicted RBP11.13□□□□□ -0.63
CDC42-IT1-201ENST00000431803 RCSD1Q6JBY9 416 aa11.13□□□□□ -0.63
CDC42-IT1-201ENST00000431803 KCTD1Q719H9 257 aa11.13□□□□□ -0.63
CDC42-IT1-201ENST00000431803 ARMCX2Q7L311 632 aa11.13□□□□□ -0.63
CDC42-IT1-201ENST00000431803 ANKRD33Q7Z3H0 272 aa11.13□□□□□ -0.63
CDC42-IT1-201ENST00000431803 ZNF589Q86UQ0 364 aaPredicted RBP11.13□□□□□ -0.63
CDC42-IT1-201ENST00000431803 CCDC144CPQ8IYA2 1237 aa11.13□□□□□ -0.63
CDC42-IT1-201ENST00000431803 BADQ92934 168 aa11.13□□□□□ -0.63
CDC42-IT1-201ENST00000431803 AGBL1Q96MI9 1066 aa11.13□□□□□ -0.63
CDC42-IT1-201ENST00000431803 UPF3AQ9H1J1 476 aaKnown RBP11.13□□□□□ -0.63
CDC42-IT1-201ENST00000431803 RNF146Q9NTX7 359 aa11.13□□□□□ -0.63
CDC42-IT1-201ENST00000431803 CUL9Q8IWT3 2517 aa11.12□□□□□ -0.63
CDC42-IT1-201ENST00000431803 LRRC37A2A6NM11 1700 aa11.12□□□□□ -0.63
CDC42-IT1-201ENST00000431803 ASTN1O14525 1302 aa11.12□□□□□ -0.63
CDC42-IT1-201ENST00000431803 CHD9Q3L8U1 2897 aa11.12□□□□□ -0.63
CDC42-IT1-201ENST00000431803 MYADML2A6NDP7 307 aa11.12□□□□□ -0.63
CDC42-IT1-201ENST00000431803 KIAA0355O15063 1070 aa11.12□□□□□ -0.63
CDC42-IT1-201ENST00000431803 RANBP6O60518 1105 aaKnown RBP11.12□□□□□ -0.63
CDC42-IT1-201ENST00000431803 CLTBP09497 229 aa11.12□□□□□ -0.63
CDC42-IT1-201ENST00000431803 HSPD1P10809 573 aaKnown RBP11.12□□□□□ -0.63
CDC42-IT1-201ENST00000431803 ITGB8P26012 769 aa11.12□□□□□ -0.63
CDC42-IT1-201ENST00000431803 NKX3-2P78367 333 aa11.12□□□□□ -0.63
CDC42-IT1-201ENST00000431803 CNTN2Q02246 1040 aa11.12□□□□□ -0.63
CDC42-IT1-201ENST00000431803 IKQ13123 557 aaPredicted RBP11.12□□□□□ -0.63
CDC42-IT1-201ENST00000431803 KCNA10Q16322 511 aa11.12□□□□□ -0.63
CDC42-IT1-201ENST00000431803 CCDC144BQ3MJ40 725 aa11.12□□□□□ -0.63
CDC42-IT1-201ENST00000431803 C9orf50Q5SZB4 431 aa11.12□□□□□ -0.63
CDC42-IT1-201ENST00000431803 DCAF4Q8WV16 495 aa11.12□□□□□ -0.63
CDC42-IT1-201ENST00000431803 TOX2Q96NM4 488 aa11.12□□□□□ -0.63
CDC42-IT1-201ENST00000431803 LNPKQ9C0E8 428 aa11.12□□□□□ -0.63
CDC42-IT1-201ENST00000431803 CDHR5Q9HBB8 845 aa11.12□□□□□ -0.63
CDC42-IT1-201ENST00000431803 HCSTQ9UBK5 93 aa11.12□□□□□ -0.63
CDC42-IT1-201ENST00000431803 PRR12Q9ULL5 1215 aa11.12□□□□□ -0.63
CDC42-IT1-201ENST00000431803 ISY1Q9ULR0 285 aaKnown RBP11.12□□□□□ -0.63
CDC42-IT1-201ENST00000431803 STXBP5LQ9Y2K9 1186 aa11.12□□□□□ -0.63
CDC42-IT1-201ENST00000431803 CCDC171Q6TFL3 1326 aa11.11□□□□□ -0.63
CDC42-IT1-201ENST00000431803 SOWAHBA6NEL2 793 aa11.11□□□□□ -0.63
CDC42-IT1-201ENST00000431803 CTAGE5O15320 804 aa11.11□□□□□ -0.63
CDC42-IT1-201ENST00000431803 PQBP1O60828 265 aaKnown RBP11.11□□□□□ -0.63
CDC42-IT1-201ENST00000431803 GJA9P57773 515 aa11.11□□□□□ -0.63
CDC42-IT1-201ENST00000431803 FAAP100Q0VG06 881 aa11.11□□□□□ -0.63
CDC42-IT1-201ENST00000431803 NMIQ13287 307 aaPredicted RBP11.11□□□□□ -0.63
CDC42-IT1-201ENST00000431803 SHHQ15465 462 aa11.11□□□□□ -0.63
CDC42-IT1-201ENST00000431803 BTNL9Q6UXG8 535 aa11.11□□□□□ -0.63
CDC42-IT1-201ENST00000431803 NUP133Q8WUM0 1156 aa11.11□□□□□ -0.63
CDC42-IT1-201ENST00000431803 CHMP4CQ96CF2 233 aa11.11□□□□□ -0.63
CDC42-IT1-201ENST00000431803 TRERF1Q96PN7 1200 aa11.11□□□□□ -0.63
CDC42-IT1-201ENST00000431803 RANBP17Q9H2T7 1088 aaKnown RBP11.11□□□□□ -0.63
CDC42-IT1-201ENST00000431803 OSBPL3Q9H4L5 887 aa11.11□□□□□ -0.63
CDC42-IT1-201ENST00000431803 STARD7Q9NQZ5 370 aa11.11□□□□□ -0.63
CDC42-IT1-201ENST00000431803 TCP11L1Q9NUJ3 509 aa11.11□□□□□ -0.63
CDC42-IT1-201ENST00000431803 ELP1O95163 1332 aa11.1□□□□□ -0.63
CDC42-IT1-201ENST00000431803 LCTP09848 1927 aa11.1□□□□□ -0.63
CDC42-IT1-201ENST00000431803 ICAM1P05362 532 aa11.1□□□□□ -0.63
CDC42-IT1-201ENST00000431803 C6orf222P0C671 652 aaPredicted RBP11.1□□□□□ -0.63
CDC42-IT1-201ENST00000431803 TOP1P11387 765 aaKnown RBP11.1□□□□□ -0.63
CDC42-IT1-201ENST00000431803 PCP11498 1178 aaKnown RBP11.1□□□□□ -0.63
CDC42-IT1-201ENST00000431803 ALAS1P13196 640 aa11.1□□□□□ -0.63
CDC42-IT1-201ENST00000431803 CDK7P50613 346 aa11.1□□□□□ -0.63
CDC42-IT1-201ENST00000431803 SNAP25P60880 206 aa11.1□□□□□ -0.63
CDC42-IT1-201ENST00000431803 NUCB1Q02818 461 aa11.1□□□□□ -0.63
CDC42-IT1-201ENST00000431803 MUM1L1Q5H9M0 696 aa11.1□□□□□ -0.63
CDC42-IT1-201ENST00000431803 CCDC174Q6PII3 467 aa11.1□□□□□ -0.63
CDC42-IT1-201ENST00000431803 CHD1LQ86WJ1 897 aa11.1□□□□□ -0.63
CDC42-IT1-201ENST00000431803 PCSK9Q8NBP7 692 aaKnown RBP11.1□□□□□ -0.63
CDC42-IT1-201ENST00000431803 WNT2BQ93097 391 aa11.1□□□□□ -0.63
CDC42-IT1-201ENST00000431803 TMEM47Q9BQJ4 181 aa11.1□□□□□ -0.63
CDC42-IT1-201ENST00000431803 SPC25Q9HBM1 224 aa11.1□□□□□ -0.63
CDC42-IT1-201ENST00000431803 CYP39A1Q9NYL5 469 aa11.1□□□□□ -0.63
CDC42-IT1-201ENST00000431803 TBX21Q9UL17 535 aa11.1□□□□□ -0.63
CDC42-IT1-201ENST00000431803 VCANP13611 3396 aa11.1□□□□□ -0.63
CDC42-IT1-201ENST00000431803 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.09□□□□□ -0.63
CDC42-IT1-201ENST00000431803 ASB14A6NK59 587 aa11.09□□□□□ -0.63
CDC42-IT1-201ENST00000431803 IGHDP01880 384 aa11.09□□□□□ -0.63
CDC42-IT1-201ENST00000431803 ASGR1P07306 291 aa11.09□□□□□ -0.63
CDC42-IT1-201ENST00000431803 SNHG28P0DPA3 235 aa11.09□□□□□ -0.63
CDC42-IT1-201ENST00000431803 PDHBP11177 359 aa11.09□□□□□ -0.63
CDC42-IT1-201ENST00000431803 RAG1P15918 1043 aa11.09□□□□□ -0.63
CDC42-IT1-201ENST00000431803 SDSP20132 328 aa11.09□□□□□ -0.63
CDC42-IT1-201ENST00000431803 SLC16A2P36021 539 aa11.09□□□□□ -0.63
CDC42-IT1-201ENST00000431803 EPHB4P54760 987 aa11.09□□□□□ -0.63
CDC42-IT1-201ENST00000431803 HAND2P61296 217 aa11.09□□□□□ -0.63
CDC42-IT1-201ENST00000431803 CCDC96Q2M329 555 aa11.09□□□□□ -0.63
CDC42-IT1-201ENST00000431803 RRP12Q5JTH9 1297 aaKnown RBP11.09□□□□□ -0.63
CDC42-IT1-201ENST00000431803 SYDE2Q5VT97 1194 aa11.09□□□□□ -0.63
CDC42-IT1-201ENST00000431803 TTBK2Q6IQ55 1244 aa11.09□□□□□ -0.63
CDC42-IT1-201ENST00000431803 TBC1D10CQ8IV04 446 aa11.09□□□□□ -0.63
CDC42-IT1-201ENST00000431803 PLEKHM2Q8IWE5 1019 aa11.09□□□□□ -0.63
CDC42-IT1-201ENST00000431803 SLC17A8Q8NDX2 589 aa11.09□□□□□ -0.63
CDC42-IT1-201ENST00000431803 MORC4Q8TE76 937 aa11.09□□□□□ -0.63
CDC42-IT1-201ENST00000431803 GLT1D1Q96MS3 346 aa11.09□□□□□ -0.63
CDC42-IT1-201ENST00000431803 GUCD1Q96NT3 240 aa11.09□□□□□ -0.63
CDC42-IT1-201ENST00000431803 RWDD1Q9H446 243 aaPredicted RBP11.09□□□□□ -0.63
CDC42-IT1-201ENST00000431803 TOMM22Q9NS69 142 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms