RNA–Protein interactions for RNA: ENST00000431183.6

SMPD4-205, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2 BASIC

Gene SMPD4, Length 3,614 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-205ENST00000431183 KRBA2Q6ZNG9 492 aa12.74□□□□□ -0.37
SMPD4-205ENST00000431183 KRT25Q7Z3Z0 450 aa12.74□□□□□ -0.37
SMPD4-205ENST00000431183 ANO10Q9NW15 660 aa12.74□□□□□ -0.37
SMPD4-205ENST00000431183 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.74□□□□□ -0.37
SMPD4-205ENST00000431183 FZD9O00144 591 aa12.74□□□□□ -0.37
SMPD4-205ENST00000431183 LETM1O95202 739 aaPredicted RBP12.74□□□□□ -0.37
SMPD4-205ENST00000431183 POSTNQ15063 836 aa12.74□□□□□ -0.37
SMPD4-205ENST00000431183 STX1AQ16623 288 aa12.74□□□□□ -0.37
SMPD4-205ENST00000431183 DCAF15Q66K64 600 aa12.74□□□□□ -0.37
SMPD4-205ENST00000431183 LDHDQ86WU2 507 aa12.74□□□□□ -0.37
SMPD4-205ENST00000431183 FAM200AQ8TCP9 573 aa12.74□□□□□ -0.37
SMPD4-205ENST00000431183 ANO3Q9BYT9 981 aa12.74□□□□□ -0.37
SMPD4-205ENST00000431183 VCPKMTQ9H867 229 aa12.74□□□□□ -0.37
SMPD4-205ENST00000431183 TNS1Q9HBL0 1735 aaKnown RBP12.73□□□□□ -0.37
SMPD4-205ENST00000431183 ABCB11O95342 1321 aa12.73□□□□□ -0.37
SMPD4-205ENST00000431183 VGLL3A8MV65 326 aa12.73□□□□□ -0.37
SMPD4-205ENST00000431183 TATDN1Q6P1N9 297 aa12.73□□□□□ -0.37
SMPD4-205ENST00000431183 RRAGCQ9HB90 399 aa12.73□□□□□ -0.37
SMPD4-205ENST00000431183 TMOD4Q9NZQ9 345 aa12.73□□□□□ -0.37
SMPD4-205ENST00000431183 NRBP1Q9UHY1 535 aa12.73□□□□□ -0.37
SMPD4-205ENST00000431183 OR52Z1P0C646 297 aa12.73□□□□□ -0.37
SMPD4-205ENST00000431183 ATP1A3P13637 1013 aa12.73□□□□□ -0.37
SMPD4-205ENST00000431183 EPHX2P34913 555 aa12.73□□□□□ -0.37
SMPD4-205ENST00000431183 IL17AQ16552 155 aa12.73□□□□□ -0.37
SMPD4-205ENST00000431183 CABP7Q86V35 215 aa12.73□□□□□ -0.37
SMPD4-205ENST00000431183 METTL16Q86W50 562 aaKnown RBP12.73□□□□□ -0.37
SMPD4-205ENST00000431183 GPC2Q8N158 579 aa12.73□□□□□ -0.37
SMPD4-205ENST00000431183 CHURC1Q8WUH1 139 aa12.73□□□□□ -0.37
SMPD4-205ENST00000431183 CCDC88AQ3V6T2 1871 aa12.73□□□□□ -0.37
SMPD4-205ENST00000431183 CCT6AP40227 531 aaKnown RBP12.73□□□□□ -0.37
SMPD4-205ENST00000431183 CUL4BQ13620 913 aa12.73□□□□□ -0.37
SMPD4-205ENST00000431183 NCAPG2Q86XI2 1143 aa12.73□□□□□ -0.37
SMPD4-205ENST00000431183 MTA3Q9BTC8 594 aa12.73□□□□□ -0.37
SMPD4-205ENST00000431183 EHD4Q9H223 541 aa12.73□□□□□ -0.37
SMPD4-205ENST00000431183 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.73□□□□□ -0.37
SMPD4-205ENST00000431183 HOOK1Q9UJC3 728 aaKnown RBP12.73□□□□□ -0.37
SMPD4-205ENST00000431183 PCDHA12Q9UN75 941 aa12.73□□□□□ -0.37
SMPD4-205ENST00000431183 SFI1A8K8P3 1242 aa12.72□□□□□ -0.37
SMPD4-205ENST00000431183 NF2P35240 595 aa12.72□□□□□ -0.37
SMPD4-205ENST00000431183 LRRC41Q15345 812 aa12.72□□□□□ -0.37
SMPD4-205ENST00000431183 NUDT12Q9BQG2 462 aa12.72□□□□□ -0.37
SMPD4-205ENST00000431183 SRPRBQ9Y5M8 271 aaKnown RBP12.72□□□□□ -0.37
SMPD4-205ENST00000431183 IGSF3O75054 1194 aa12.72□□□□□ -0.37
SMPD4-205ENST00000431183 VCAM1P19320 739 aa12.72□□□□□ -0.37
SMPD4-205ENST00000431183 TMEM266Q2M3C6 531 aa12.72□□□□□ -0.37
SMPD4-205ENST00000431183 PLCD3Q8N3E9 789 aa12.72□□□□□ -0.37
SMPD4-205ENST00000431183 CCDC34Q96HJ3 373 aa12.72□□□□□ -0.37
SMPD4-205ENST00000431183 CCDC94Q9BW85 323 aaPredicted RBP12.72□□□□□ -0.37
SMPD4-205ENST00000431183 RIOX1Q9H6W3 641 aa12.72□□□□□ -0.37
SMPD4-205ENST00000431183 CCDC39Q9UFE4 941 aa12.72□□□□□ -0.37
SMPD4-205ENST00000431183 PLCG1P19174 1290 aa12.71□□□□□ -0.37
SMPD4-205ENST00000431183 GRIPAP1Q4V328 841 aa12.71□□□□□ -0.37
SMPD4-205ENST00000431183 SNRNP48Q6IEG0 339 aaKnown RBP12.71□□□□□ -0.37
SMPD4-205ENST00000431183 TPH2Q8IWU9 490 aa12.71□□□□□ -0.37
SMPD4-205ENST00000431183 ENGASEQ8NFI3 743 aa12.71□□□□□ -0.37
SMPD4-205ENST00000431183 PIGOQ8TEQ8 1089 aa12.71□□□□□ -0.37
SMPD4-205ENST00000431183 CCDC43Q96MW1 224 aaKnown RBP12.71□□□□□ -0.37
SMPD4-205ENST00000431183 ZMYND12Q9H0C1 365 aa12.71□□□□□ -0.37
SMPD4-205ENST00000431183 AP5Z1O43299 807 aa12.71□□□□□ -0.37
SMPD4-205ENST00000431183 SUPT20HL1Q3ZLR7 823 aa12.71□□□□□ -0.37
SMPD4-205ENST00000431183 HS1BP3Q53T59 392 aa12.71□□□□□ -0.37
SMPD4-205ENST00000431183 RESP18Q5W5W9 173 aa12.71□□□□□ -0.37
SMPD4-205ENST00000431183 IQUBQ8NA54 791 aa12.71□□□□□ -0.37
SMPD4-205ENST00000431183 SH2D4AQ9H788 454 aa12.71□□□□□ -0.37
SMPD4-205ENST00000431183 GDAQ9Y2T3 454 aa12.71□□□□□ -0.37
SMPD4-205ENST00000431183 TMX2Q9Y320 296 aa12.71□□□□□ -0.37
SMPD4-205ENST00000431183 PABPC4Q13310 644 aaKnown RBP eCLIP12.71□□□□□ -0.383e-6■□□□□ 9
SMPD4-205ENST00000431183 VGLL4Q14135 290 aa12.71□□□□□ -0.38
SMPD4-205ENST00000431183 MCM6Q14566 821 aa12.71□□□□□ -0.38
SMPD4-205ENST00000431183 ARID5BQ14865 1188 aa12.71□□□□□ -0.38
SMPD4-205ENST00000431183 NAT10Q9H0A0 1025 aaKnown RBP12.71□□□□□ -0.38
SMPD4-205ENST00000431183 RGL1Q9NZL6 768 aa12.71□□□□□ -0.38
SMPD4-205ENST00000431183 IFNKQ9P0W0 207 aa12.71□□□□□ -0.38
SMPD4-205ENST00000431183 KIAA1024Q9UPX6 916 aa12.71□□□□□ -0.38
SMPD4-205ENST00000431183 BRCA2P51587 3418 aa12.7□□□□□ -0.38
SMPD4-205ENST00000431183 GCOM1H8Y6P7 765 aaPredicted RBP12.7□□□□□ -0.38
SMPD4-205ENST00000431183 PPP6R2O75170 966 aa12.7□□□□□ -0.38
SMPD4-205ENST00000431183 POLR2MP0CAP2 368 aa12.7□□□□□ -0.38
SMPD4-205ENST00000431183 IBSPP21815 317 aaPredicted RBP12.7□□□□□ -0.38
SMPD4-205ENST00000431183 IRX3P78415 501 aaPredicted RBP12.7□□□□□ -0.38
SMPD4-205ENST00000431183 ARHGAP4P98171 946 aa12.7□□□□□ -0.38
SMPD4-205ENST00000431183 DCAF4Q8WV16 495 aa12.7□□□□□ -0.38
SMPD4-205ENST00000431183 DPF2Q92785 391 aa12.7□□□□□ -0.38
SMPD4-205ENST00000431183 CALML4Q96GE6 196 aa12.7□□□□□ -0.38
SMPD4-205ENST00000431183 PCMTD1Q96MG8 357 aaPredicted RBP12.7□□□□□ -0.38
SMPD4-205ENST00000431183 TEPSINQ96N21 525 aa12.7□□□□□ -0.38
SMPD4-205ENST00000431183 ROBO3Q96MS0 1386 aa12.7□□□□□ -0.38
SMPD4-205ENST00000431183 NPHP3-ACAD11A0A0J9YXS1 232 aa12.7□□□□□ -0.38
SMPD4-205ENST00000431183 RPS12P25398 132 aaKnown RBP12.7□□□□□ -0.38
SMPD4-205ENST00000431183 KRT79Q5XKE5 535 aa12.7□□□□□ -0.38
SMPD4-205ENST00000431183 NELFCDQ8IXH7 590 aa12.7□□□□□ -0.38
SMPD4-205ENST00000431183 ZNF280CQ8ND82 737 aa12.7□□□□□ -0.38
SMPD4-205ENST00000431183 SLC39A2Q9NP94 309 aa12.7□□□□□ -0.38
SMPD4-205ENST00000431183 IRF6O14896 467 aa12.7□□□□□ -0.38
SMPD4-205ENST00000431183 ZBTB39O15060 712 aa12.7□□□□□ -0.38
SMPD4-205ENST00000431183 DMTNQ08495 405 aa12.7□□□□□ -0.38
SMPD4-205ENST00000431183 CTTNQ14247 550 aaKnown RBP12.7□□□□□ -0.38
SMPD4-205ENST00000431183 ATL3Q6DD88 541 aa12.7□□□□□ -0.38
SMPD4-205ENST00000431183 FAM83AQ86UY5 434 aa12.7□□□□□ -0.38
SMPD4-205ENST00000431183 SMCR8Q8TEV9 937 aaPredicted RBP12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms