RNA–Protein interactions for RNA: ENST00000430982.1

PTCD1-204, Transcript of pentatricopeptide repeat domain 1, humanhuman

TSL 4

Gene PTCD1, Length 571 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-204ENST00000430982 CDC37Q16543 378 aaPredicted RBP17.69■□□□□ 0.42
PTCD1-204ENST00000430982 MUM1L1Q5H9M0 696 aa17.69■□□□□ 0.42
PTCD1-204ENST00000430982 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.69■□□□□ 0.42
PTCD1-204ENST00000430982 ZNF654Q8IZM8 581 aa17.69■□□□□ 0.42
PTCD1-204ENST00000430982 ATXN2LQ8WWM7 1075 aaKnown RBP17.69■□□□□ 0.42
PTCD1-204ENST00000430982 MYL10Q9BUA6 226 aa17.69■□□□□ 0.42
PTCD1-204ENST00000430982 ZNF576Q9H609 170 aa17.69■□□□□ 0.42
PTCD1-204ENST00000430982 RAPGEFL1Q9UHV5 662 aa17.69■□□□□ 0.42
PTCD1-204ENST00000430982 MAD2L2Q9UI95 211 aa17.69■□□□□ 0.42
PTCD1-204ENST00000430982 PNMA2Q9UL42 364 aa17.69■□□□□ 0.42
PTCD1-204ENST00000430982 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.68■□□□□ 0.42
PTCD1-204ENST00000430982 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.68■□□□□ 0.42
PTCD1-204ENST00000430982 PALM3A6NDB9 673 aaPredicted RBP17.68■□□□□ 0.42
PTCD1-204ENST00000430982 FPGSQ05932 587 aa17.68■□□□□ 0.42
PTCD1-204ENST00000430982 TROAPQ12815 778 aa17.68■□□□□ 0.42
PTCD1-204ENST00000430982 USH1GQ495M9 461 aa17.68■□□□□ 0.42
PTCD1-204ENST00000430982 PRAMEF19Q5SWL8 479 aa17.68■□□□□ 0.42
PTCD1-204ENST00000430982 NSMFQ6X4W1 530 aa17.68■□□□□ 0.42
PTCD1-204ENST00000430982 DHX32Q7L7V1 743 aaKnown RBP17.68■□□□□ 0.42
PTCD1-204ENST00000430982 ANKRD33Q7Z3H0 272 aa17.68■□□□□ 0.42
PTCD1-204ENST00000430982 TMTC2Q8N394 836 aa17.68■□□□□ 0.42
PTCD1-204ENST00000430982 KCNB2Q92953 911 aa17.68■□□□□ 0.42
PTCD1-204ENST00000430982 TCEANC2Q96MN5 208 aa17.68■□□□□ 0.42
PTCD1-204ENST00000430982 JAKMIP1Q96N16 626 aaKnown RBP17.68■□□□□ 0.42
PTCD1-204ENST00000430982 A1CFQ9NQ94 594 aaKnown RBP17.68■□□□□ 0.42
PTCD1-204ENST00000430982 DIS3Q9Y2L1 958 aaKnown RBP17.68■□□□□ 0.42
PTCD1-204ENST00000430982 SNX14Q9Y5W7 946 aa17.68■□□□□ 0.42
PTCD1-204ENST00000430982 WDR19Q8NEZ3 1342 aa17.68■□□□□ 0.42
PTCD1-204ENST00000430982 SMCHD1A6NHR9 2005 aa17.67■□□□□ 0.42
PTCD1-204ENST00000430982 DNAJC25-GNG10A0A024R161 153 aa17.67■□□□□ 0.42
PTCD1-204ENST00000430982 DDAH1O94760 285 aa17.67■□□□□ 0.42
PTCD1-204ENST00000430982 LIFRP42702 1097 aa17.67■□□□□ 0.42
PTCD1-204ENST00000430982 RAB11FIP4Q86YS3 637 aa17.67■□□□□ 0.42
PTCD1-204ENST00000430982 CTCFLQ8NI51 663 aaPredicted RBP17.67■□□□□ 0.42
PTCD1-204ENST00000430982 TIFAQ96CG3 184 aa17.67■□□□□ 0.42
PTCD1-204ENST00000430982 TOX2Q96NM4 488 aa17.67■□□□□ 0.42
PTCD1-204ENST00000430982 JMJD4Q9H9V9 463 aa17.67■□□□□ 0.42
PTCD1-204ENST00000430982 NFIBO00712 420 aa17.66■□□□□ 0.42
PTCD1-204ENST00000430982 HMGB1P09429 215 aaKnown RBP17.66■□□□□ 0.42
PTCD1-204ENST00000430982 CPA1P15085 419 aa17.66■□□□□ 0.42
PTCD1-204ENST00000430982 RAG1P15918 1043 aa17.66■□□□□ 0.42
PTCD1-204ENST00000430982 EXOSC10Q01780 885 aaKnown RBP17.66■□□□□ 0.42
PTCD1-204ENST00000430982 CNTN2Q02246 1040 aa17.66■□□□□ 0.42
PTCD1-204ENST00000430982 QRICH1Q2TAL8 776 aa17.66■□□□□ 0.42
PTCD1-204ENST00000430982 RASIP1Q5U651 963 aa17.66■□□□□ 0.42
PTCD1-204ENST00000430982 ASB2Q96Q27 587 aa17.66■□□□□ 0.42
PTCD1-204ENST00000430982 TINF2Q9BSI4 451 aa17.66■□□□□ 0.42
PTCD1-204ENST00000430982 USP26Q9BXU7 913 aa17.66■□□□□ 0.42
PTCD1-204ENST00000430982 XPNPEP3Q9NQH7 507 aa17.66■□□□□ 0.42
PTCD1-204ENST00000430982 SLC12A7Q9Y666 1083 aa17.66■□□□□ 0.42
PTCD1-204ENST00000430982 CHD7Q9P2D1 2997 aa17.65■□□□□ 0.42
PTCD1-204ENST00000430982 A0A1W2PQ45 241 aaPredicted RBP17.65■□□□□ 0.42
PTCD1-204ENST00000430982 A0A1W2PQY0 241 aa17.65■□□□□ 0.42
PTCD1-204ENST00000430982 EPB41L2O43491 1005 aaKnown RBP17.65■□□□□ 0.42
PTCD1-204ENST00000430982 RXRAP19793 462 aa17.65■□□□□ 0.42
PTCD1-204ENST00000430982 KIF5BP33176 963 aa17.65■□□□□ 0.42
PTCD1-204ENST00000430982 FGD1P98174 961 aa17.65■□□□□ 0.42
PTCD1-204ENST00000430982 FAAP100Q0VG06 881 aa17.65■□□□□ 0.42
PTCD1-204ENST00000430982 BLOC1S2Q6QNY1 142 aa17.65■□□□□ 0.42
PTCD1-204ENST00000430982 SYNE3Q6ZMZ3 975 aa17.65■□□□□ 0.42
PTCD1-204ENST00000430982 HOMER1Q86YM7 354 aa17.65■□□□□ 0.42
PTCD1-204ENST00000430982 CCDC144CPQ8IYA2 1237 aa17.65■□□□□ 0.42
PTCD1-204ENST00000430982 CYP39A1Q9NYL5 469 aa17.65■□□□□ 0.42
PTCD1-204ENST00000430982 THEGQ9P2T0 379 aa17.65■□□□□ 0.42
PTCD1-204ENST00000430982 ZNFX1Q9P2E3 1918 aaKnown RBP17.64■□□□□ 0.42
PTCD1-204ENST00000430982 PTPDC1A2A3K4 754 aa17.64■□□□□ 0.41
PTCD1-204ENST00000430982 ADAMTS4O75173 837 aa17.64■□□□□ 0.41
PTCD1-204ENST00000430982 MYCNP04198 464 aaPredicted RBP17.64■□□□□ 0.41
PTCD1-204ENST00000430982 CALM1P0DP23 149 aa17.64■□□□□ 0.41
PTCD1-204ENST00000430982 CALM2P0DP24 149 aa17.64■□□□□ 0.41
PTCD1-204ENST00000430982 CALM3P0DP25 149 aa17.64■□□□□ 0.41
PTCD1-204ENST00000430982 RARBP10826 455 aa17.64■□□□□ 0.41
PTCD1-204ENST00000430982 BAATQ14032 418 aaPredicted RBP17.64■□□□□ 0.41
PTCD1-204ENST00000430982 SLC35G1Q2M3R5 365 aa17.64■□□□□ 0.41
PTCD1-204ENST00000430982 RNF180Q86T96 592 aa17.64■□□□□ 0.41
PTCD1-204ENST00000430982 FBXO11Q86XK2 927 aa17.64■□□□□ 0.41
PTCD1-204ENST00000430982 FAM133AQ8N9E0 248 aa17.64■□□□□ 0.41
PTCD1-204ENST00000430982 CLEC4DQ8WXI8 215 aa17.64■□□□□ 0.41
PTCD1-204ENST00000430982 MAP3K14Q99558 947 aa17.64■□□□□ 0.41
PTCD1-204ENST00000430982 TBX21Q9UL17 535 aa17.64■□□□□ 0.41
PTCD1-204ENST00000430982 CNPY2Q9Y2B0 182 aa17.64■□□□□ 0.41
PTCD1-204ENST00000430982 ABCB11O95342 1321 aa17.64■□□□□ 0.41
PTCD1-204ENST00000430982 PLXNA1Q9UIW2 1896 aa17.63■□□□□ 0.41
PTCD1-204ENST00000430982 PQBP1O60828 265 aaKnown RBP17.63■□□□□ 0.41
PTCD1-204ENST00000430982 PSMA5P28066 241 aa17.63■□□□□ 0.41
PTCD1-204ENST00000430982 ZNF467Q7Z7K2 595 aaPredicted RBP17.63■□□□□ 0.41
PTCD1-204ENST00000430982 SGMS1Q86VZ5 419 aa17.63■□□□□ 0.41
PTCD1-204ENST00000430982 MICU3Q86XE3 530 aa17.63■□□□□ 0.41
PTCD1-204ENST00000430982 MSL3Q8N5Y2 521 aaKnown RBP17.63■□□□□ 0.41
PTCD1-204ENST00000430982 ADAMTS19Q8TE59 1207 aa17.63■□□□□ 0.41
PTCD1-204ENST00000430982 PIBF1Q8WXW3 757 aa17.63■□□□□ 0.41
PTCD1-204ENST00000430982 FGD4Q96M96 766 aa17.63■□□□□ 0.41
PTCD1-204ENST00000430982 PIGSQ96S52 555 aa17.63■□□□□ 0.41
PTCD1-204ENST00000430982 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.63■□□□□ 0.417e-8■■■□□ 15.9
PTCD1-204ENST00000430982 AMNQ9BXJ7 453 aa17.63■□□□□ 0.41
PTCD1-204ENST00000430982 PBX4Q9BYU1 374 aa17.63■□□□□ 0.41
PTCD1-204ENST00000430982 RIOX1Q9H6W3 641 aa17.63■□□□□ 0.41
PTCD1-204ENST00000430982 TMEM39AQ9NV64 488 aa17.63■□□□□ 0.41
PTCD1-204ENST00000430982 NAP1L2Q9ULW6 460 aaPredicted RBP17.63■□□□□ 0.41
PTCD1-204ENST00000430982 SOWAHBA6NEL2 793 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms