RNA–Protein interactions for RNA: ENST00000430081.5

OPTN-208, Transcript of optineurin, humanhuman

TSL 5

Gene OPTN, Length 848 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OPTN-208ENST00000430081 LRFN3Q9BTN0 628 aa12.19□□□□□ -0.46
OPTN-208ENST00000430081 FTOQ9C0B1 505 aaKnown RBP eCLIP12.19□□□□□ -0.46
OPTN-208ENST00000430081 ADD3Q9UEY8 706 aaKnown RBP12.19□□□□□ -0.46
OPTN-208ENST00000430081 CCPG1Q9ULG6 757 aa12.19□□□□□ -0.46
OPTN-208ENST00000430081 PARP14Q460N5 1801 aa12.18□□□□□ -0.46
OPTN-208ENST00000430081 SMARCA5O60264 1052 aaPredicted RBP12.18□□□□□ -0.46
OPTN-208ENST00000430081 HOXD11P31277 338 aaPredicted RBP12.18□□□□□ -0.46
OPTN-208ENST00000430081 SNAP25P60880 206 aa12.18□□□□□ -0.46
OPTN-208ENST00000430081 TMEM63BQ5T3F8 832 aa12.18□□□□□ -0.46
OPTN-208ENST00000430081 RCSD1Q6JBY9 416 aa12.18□□□□□ -0.46
OPTN-208ENST00000430081 KCTD1Q719H9 257 aa12.18□□□□□ -0.46
OPTN-208ENST00000430081 OR6J1Q8NGC5 347 aa12.18□□□□□ -0.46
OPTN-208ENST00000430081 WDR11Q9BZH6 1224 aa12.18□□□□□ -0.46
OPTN-208ENST00000430081 EPHX3Q9H6B9 360 aa12.18□□□□□ -0.46
OPTN-208ENST00000430081 EPB41L4AQ9HCS5 686 aaPredicted RBP12.18□□□□□ -0.46
OPTN-208ENST00000430081 STX8Q9UNK0 236 aa12.18□□□□□ -0.46
OPTN-208ENST00000430081 DDX49Q9Y6V7 483 aaKnown RBP12.18□□□□□ -0.46
OPTN-208ENST00000430081 RAD50Q92878 1312 aa12.17□□□□□ -0.46
OPTN-208ENST00000430081 TLL1O43897 1013 aa12.17□□□□□ -0.46
OPTN-208ENST00000430081 KPNA6O60684 536 aa12.17□□□□□ -0.46
OPTN-208ENST00000430081 PURAQ00577 322 aaKnown RBP12.17□□□□□ -0.46
OPTN-208ENST00000430081 MUM1L1Q5H9M0 696 aa12.17□□□□□ -0.46
OPTN-208ENST00000430081 HERC6Q8IVU3 1022 aa12.17□□□□□ -0.46
OPTN-208ENST00000430081 MORC4Q8TE76 937 aa12.17□□□□□ -0.46
OPTN-208ENST00000430081 VWCEQ96DN2 955 aa12.17□□□□□ -0.46
OPTN-208ENST00000430081 MPHOSPH6Q99547 160 aaKnown RBP12.17□□□□□ -0.46
OPTN-208ENST00000430081 NAPBQ9H115 298 aa12.17□□□□□ -0.46
OPTN-208ENST00000430081 PRR12Q9ULL5 1215 aa12.17□□□□□ -0.46
OPTN-208ENST00000430081 NOD1Q9Y239 953 aa12.17□□□□□ -0.46
OPTN-208ENST00000430081 MYH8P13535 1937 aa12.16□□□□□ -0.46
OPTN-208ENST00000430081 BAZ2AQ9UIF9 1905 aaKnown RBP12.16□□□□□ -0.46
OPTN-208ENST00000430081 LOC102724159A0A0B4J2E5 919 aa12.16□□□□□ -0.46
OPTN-208ENST00000430081 TSPY2A6NKD2 308 aa12.16□□□□□ -0.46
OPTN-208ENST00000430081 M0R2C6 588 aa12.16□□□□□ -0.46
OPTN-208ENST00000430081 IQCF3P0C7M6 154 aa12.16□□□□□ -0.46
OPTN-208ENST00000430081 KCNJ6P48051 423 aa12.16□□□□□ -0.46
OPTN-208ENST00000430081 TAP1Q03518 808 aa12.16□□□□□ -0.46
OPTN-208ENST00000430081 BFSP2Q13515 415 aa12.16□□□□□ -0.46
OPTN-208ENST00000430081 BAATQ14032 418 aaPredicted RBP12.16□□□□□ -0.46
OPTN-208ENST00000430081 PWP2Q15269 919 aaKnown RBP12.16□□□□□ -0.46
OPTN-208ENST00000430081 NBPF20Q3BBV1 942 aa12.16□□□□□ -0.46
OPTN-208ENST00000430081 KRT40Q6A162 431 aa12.16□□□□□ -0.46
OPTN-208ENST00000430081 PURBQ96QR8 312 aaKnown RBP12.16□□□□□ -0.46
OPTN-208ENST00000430081 MTMR7Q9Y216 660 aa12.16□□□□□ -0.46
OPTN-208ENST00000430081 PLIN4Q96Q06 1357 aa12.16□□□□□ -0.46
OPTN-208ENST00000430081 PTPDC1A2A3K4 754 aa12.15□□□□□ -0.46
OPTN-208ENST00000430081 EPOPA6NHQ4 379 aa12.15□□□□□ -0.46
OPTN-208ENST00000430081 PITPNM1O00562 1244 aa12.15□□□□□ -0.46
OPTN-208ENST00000430081 NKRFO15226 690 aaKnown RBP eCLIP12.15□□□□□ -0.46
OPTN-208ENST00000430081 BAIAP3O94812 1187 aa12.15□□□□□ -0.46
OPTN-208ENST00000430081 ICAM1P05362 532 aa12.15□□□□□ -0.46
OPTN-208ENST00000430081 ALDH5A1P51649 535 aaPredicted RBP12.15□□□□□ -0.46
OPTN-208ENST00000430081 PTPN11Q06124 597 aaPredicted RBP12.15□□□□□ -0.46
OPTN-208ENST00000430081 PPARAQ07869 468 aa12.15□□□□□ -0.46
OPTN-208ENST00000430081 GRB10Q13322 594 aa12.15□□□□□ -0.46
OPTN-208ENST00000430081 CCDC96Q2M329 555 aa12.15□□□□□ -0.46
OPTN-208ENST00000430081 NFRKBQ6P4R8 1299 aa12.15□□□□□ -0.46
OPTN-208ENST00000430081 XIRP2A4UGR9 3374 aa12.15□□□□□ -0.47
OPTN-208ENST00000430081 RBM47A0AV96 593 aaKnown RBP12.14□□□□□ -0.47
OPTN-208ENST00000430081 CALML3P27482 149 aa12.14□□□□□ -0.47
OPTN-208ENST00000430081 CHMP4BP1P59074 171 aa12.14□□□□□ -0.47
OPTN-208ENST00000430081 PDE4DQ08499 809 aa12.14□□□□□ -0.47
OPTN-208ENST00000430081 PPP2R5BQ15173 497 aa12.14□□□□□ -0.47
OPTN-208ENST00000430081 CCDC155Q8N6L0 562 aa12.14□□□□□ -0.47
OPTN-208ENST00000430081 DCAF4Q8WV16 495 aa12.14□□□□□ -0.47
OPTN-208ENST00000430081 ZBED2Q9BTP6 218 aa12.14□□□□□ -0.47
OPTN-208ENST00000430081 RANBP17Q9H2T7 1088 aaKnown RBP12.14□□□□□ -0.47
OPTN-208ENST00000430081 CHD9Q3L8U1 2897 aa12.14□□□□□ -0.47
OPTN-208ENST00000430081 B4DLN1 442 aa12.13□□□□□ -0.47
OPTN-208ENST00000430081 GPR37L1O60883 481 aa12.13□□□□□ -0.47
OPTN-208ENST00000430081 MRPL12P52815 198 aaKnown RBP12.13□□□□□ -0.47
OPTN-208ENST00000430081 SYDE2Q5VT97 1194 aa12.13□□□□□ -0.47
OPTN-208ENST00000430081 TSHZ3Q63HK5 1081 aa12.13□□□□□ -0.47
OPTN-208ENST00000430081 SCFD2Q8WU76 684 aa12.13□□□□□ -0.47
OPTN-208ENST00000430081 LMCD1Q9NZU5 365 aa12.13□□□□□ -0.47
OPTN-208ENST00000430081 RCAN3Q9UKA8 241 aa12.13□□□□□ -0.47
OPTN-208ENST00000430081 PNMA2Q9UL42 364 aa12.13□□□□□ -0.47
OPTN-208ENST00000430081 GREB1LQ9C091 1923 aaPredicted RBP12.13□□□□□ -0.47
OPTN-208ENST00000430081 A6NJR5 290 aa12.12□□□□□ -0.47
OPTN-208ENST00000430081 NFIBO00712 420 aa12.12□□□□□ -0.47
OPTN-208ENST00000430081 RANBP6O60518 1105 aaKnown RBP12.12□□□□□ -0.47
OPTN-208ENST00000430081 ARHGEF15O94989 841 aa12.12□□□□□ -0.47
OPTN-208ENST00000430081 SLC16A2P36021 539 aa12.12□□□□□ -0.47
OPTN-208ENST00000430081 PTGISQ16647 500 aa12.12□□□□□ -0.47
OPTN-208ENST00000430081 RNF207Q6ZRF8 634 aa12.12□□□□□ -0.47
OPTN-208ENST00000430081 CAGE1Q8TC20 777 aa12.12□□□□□ -0.47
OPTN-208ENST00000430081 AFAP1L1Q8TED9 768 aa12.12□□□□□ -0.47
OPTN-208ENST00000430081 PPP1R13LQ8WUF5 828 aa12.12□□□□□ -0.47
OPTN-208ENST00000430081 CRBNQ96SW2 442 aa12.12□□□□□ -0.47
OPTN-208ENST00000430081 IL17RBQ9NRM6 502 aa12.12□□□□□ -0.47
OPTN-208ENST00000430081 FAM86C2PA6NEL3 165 aa12.11□□□□□ -0.47
OPTN-208ENST00000430081 PI4K2BG5E9Z4 385 aa12.11□□□□□ -0.47
OPTN-208ENST00000430081 NMT2O60551 498 aa12.11□□□□□ -0.47
OPTN-208ENST00000430081 PARNO95453 639 aaKnown RBP12.11□□□□□ -0.47
OPTN-208ENST00000430081 TXNP10599 105 aaKnown RBP12.11□□□□□ -0.47
OPTN-208ENST00000430081 TTBK2Q6IQ55 1244 aa12.11□□□□□ -0.47
OPTN-208ENST00000430081 BTNL9Q6UXG8 535 aa12.11□□□□□ -0.47
OPTN-208ENST00000430081 SEC62Q99442 399 aaKnown RBP12.11□□□□□ -0.47
OPTN-208ENST00000430081 FSD1Q9BTV5 496 aa12.11□□□□□ -0.47
OPTN-208ENST00000430081 GPCPD1Q9NPB8 672 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms