RNA–Protein interactions for RNA: ENST00000429896.6

PTCH1-207, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 6,563 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-207ENST00000429896 ZSCAN23Q3MJ62 389 aa14.39□□□□□ -0.11
PTCH1-207ENST00000429896 RSPH3Q86UC2 560 aa14.39□□□□□ -0.11
PTCH1-207ENST00000429896 RMDN3Q96TC7 470 aa14.39□□□□□ -0.11
PTCH1-207ENST00000429896 CAP2P40123 477 aa14.38□□□□□ -0.11
PTCH1-207ENST00000429896 TOB2Q14106 344 aaPredicted RBP14.38□□□□□ -0.11
PTCH1-207ENST00000429896 HERC4Q5GLZ8 1057 aaPredicted RBP14.38□□□□□ -0.11
PTCH1-207ENST00000429896 SMC1BQ8NDV3 1235 aa14.38□□□□□ -0.11
PTCH1-207ENST00000429896 CCDC172P0C7W6 258 aa14.38□□□□□ -0.11
PTCH1-207ENST00000429896 QRICH1Q2TAL8 776 aa14.38□□□□□ -0.11
PTCH1-207ENST00000429896 TKFCQ3LXA3 575 aa14.38□□□□□ -0.11
PTCH1-207ENST00000429896 HSP90AA4PQ58FG1 418 aa14.38□□□□□ -0.11
PTCH1-207ENST00000429896 VGLL2Q8N8G2 317 aa14.38□□□□□ -0.11
PTCH1-207ENST00000429896 TBC1D5Q92609 795 aa14.38□□□□□ -0.11
PTCH1-207ENST00000429896 FNBP1Q96RU3 617 aa14.38□□□□□ -0.11
PTCH1-207ENST00000429896 GPRC5DQ9NZD1 345 aa14.38□□□□□ -0.11
PTCH1-207ENST00000429896 PRKAG2Q9UGJ0 569 aa14.38□□□□□ -0.11
PTCH1-207ENST00000429896 ANO6Q4KMQ2 910 aa14.38□□□□□ -0.11
PTCH1-207ENST00000429896 ZNF354CQ86Y25 554 aa14.38□□□□□ -0.11
PTCH1-207ENST00000429896 ZBTB8OSQ8IWT0 167 aa14.38□□□□□ -0.11
PTCH1-207ENST00000429896 HACE1Q8IYU2 909 aa14.38□□□□□ -0.11
PTCH1-207ENST00000429896 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.38□□□□□ -0.11
PTCH1-207ENST00000429896 PCDHA6Q9UN73 950 aa14.38□□□□□ -0.11
PTCH1-207ENST00000429896 PCDHA8Q9Y5H6 950 aa14.38□□□□□ -0.11
PTCH1-207ENST00000429896 NDUFB10O96000 172 aa14.38□□□□□ -0.11
PTCH1-207ENST00000429896 CTNNA2P26232 953 aa14.38□□□□□ -0.11
PTCH1-207ENST00000429896 GPBP1Q86WP2 473 aa14.38□□□□□ -0.11
PTCH1-207ENST00000429896 MB21D1Q8N884 522 aa14.38□□□□□ -0.11
PTCH1-207ENST00000429896 MTMR6Q9Y217 621 aa14.38□□□□□ -0.11
PTCH1-207ENST00000429896 GOLGA6L7A0A1B0GV03 622 aa14.38□□□□□ -0.11
PTCH1-207ENST00000429896 POLGP54098 1239 aaPredicted RBP14.38□□□□□ -0.11
PTCH1-207ENST00000429896 NBPF12Q5TAG4 269 aaPredicted RBP14.38□□□□□ -0.11
PTCH1-207ENST00000429896 ERO1BQ86YB8 467 aa14.38□□□□□ -0.11
PTCH1-207ENST00000429896 RAET1EQ8TD07 263 aa14.38□□□□□ -0.11
PTCH1-207ENST00000429896 SUGCTQ9HAC7 445 aa14.38□□□□□ -0.11
PTCH1-207ENST00000429896 POLR3GO15318 223 aaPredicted RBP14.38□□□□□ -0.11
PTCH1-207ENST00000429896 EIF3JO75822 258 aaKnown RBP14.38□□□□□ -0.11
PTCH1-207ENST00000429896 LONP1P36776 959 aaKnown RBP14.38□□□□□ -0.11
PTCH1-207ENST00000429896 RAD51AP2Q09MP3 1159 aa14.38□□□□□ -0.11
PTCH1-207ENST00000429896 PTGDRQ13258 359 aa14.38□□□□□ -0.11
PTCH1-207ENST00000429896 GLIS2Q9BZE0 524 aaPredicted RBP14.38□□□□□ -0.11
PTCH1-207ENST00000429896 MRPL44Q9H9J2 332 aaKnown RBP14.38□□□□□ -0.11
PTCH1-207ENST00000429896 BRD1O95696 1058 aa14.37□□□□□ -0.11
PTCH1-207ENST00000429896 EPB41P11171 864 aaKnown RBP14.37□□□□□ -0.11
PTCH1-207ENST00000429896 XRCC6P12956 609 aaKnown RBP eCLIP14.37□□□□□ -0.11
PTCH1-207ENST00000429896 RGS22Q8NE09 1264 aa14.37□□□□□ -0.11
PTCH1-207ENST00000429896 RIOK1Q9BRS2 568 aaKnown RBP14.37□□□□□ -0.11
PTCH1-207ENST00000429896 EHD4Q9H223 541 aa14.37□□□□□ -0.11
PTCH1-207ENST00000429896 SEPT9Q9UHD8 586 aaPredicted RBP14.37□□□□□ -0.11
PTCH1-207ENST00000429896 ADM5C9JUS6 153 aa14.37□□□□□ -0.11
PTCH1-207ENST00000429896 PSAPP07602 524 aa14.37□□□□□ -0.11
PTCH1-207ENST00000429896 CBX1P83916 185 aa14.37□□□□□ -0.11
PTCH1-207ENST00000429896 TSGA10IPQ3SY00 556 aa14.37□□□□□ -0.11
PTCH1-207ENST00000429896 ANAPC4Q9UJX5 808 aa14.37□□□□□ -0.11
PTCH1-207ENST00000429896 URI1O94763 535 aaPredicted RBP14.37□□□□□ -0.11
PTCH1-207ENST00000429896 IFFO1Q0D2I5 559 aa14.37□□□□□ -0.11
PTCH1-207ENST00000429896 STK36Q9NRP7 1315 aa14.37□□□□□ -0.11
PTCH1-207ENST00000429896 LDHDQ86WU2 507 aa14.37□□□□□ -0.11
PTCH1-207ENST00000429896 JPH2Q9BR39 696 aaPredicted RBP14.37□□□□□ -0.11
PTCH1-207ENST00000429896 KCPQ6ZWJ8 1503 aa14.36□□□□□ -0.11
PTCH1-207ENST00000429896 MYL3P08590 195 aa14.36□□□□□ -0.11
PTCH1-207ENST00000429896 SGMS1Q86VZ5 419 aa14.36□□□□□ -0.11
PTCH1-207ENST00000429896 GIMAP8Q8ND71 665 aaPredicted RBP14.36□□□□□ -0.11
PTCH1-207ENST00000429896 ASB14A6NK59 587 aa14.36□□□□□ -0.11
PTCH1-207ENST00000429896 SFPQP23246 707 aaKnown RBP eCLIP14.36□□□□□ -0.11
PTCH1-207ENST00000429896 STX17P56962 302 aa14.36□□□□□ -0.11
PTCH1-207ENST00000429896 DPH6Q7L8W6 267 aa14.36□□□□□ -0.11
PTCH1-207ENST00000429896 TMCO5BA8MYB1 307 aa14.36□□□□□ -0.11
PTCH1-207ENST00000429896 TRAF5O00463 557 aa14.36□□□□□ -0.11
PTCH1-207ENST00000429896 GCNT3O95395 438 aa14.36□□□□□ -0.11
PTCH1-207ENST00000429896 CCDC84Q86UT8 332 aaPredicted RBP14.36□□□□□ -0.11
PTCH1-207ENST00000429896 CLEC10AQ8IUN9 316 aa14.36□□□□□ -0.11
PTCH1-207ENST00000429896 RETREG2Q8NC44 543 aa14.36□□□□□ -0.11
PTCH1-207ENST00000429896 H0YCG3 227 aa14.36□□□□□ -0.11
PTCH1-207ENST00000429896 ZNF543Q08ER8 600 aa14.36□□□□□ -0.11
PTCH1-207ENST00000429896 CEP135Q66GS9 1140 aa14.36□□□□□ -0.11
PTCH1-207ENST00000429896 IQCEQ6IPM2 695 aa14.36□□□□□ -0.11
PTCH1-207ENST00000429896 LUZP1Q86V48 1076 aa14.36□□□□□ -0.11
PTCH1-207ENST00000429896 EXOC8Q8IYI6 725 aa14.36□□□□□ -0.11
PTCH1-207ENST00000429896 LARGE1O95461 756 aa14.36□□□□□ -0.11
PTCH1-207ENST00000429896 KIF23Q02241 960 aaPredicted RBP14.36□□□□□ -0.11
PTCH1-207ENST00000429896 TFDP1Q14186 410 aa14.36□□□□□ -0.11
PTCH1-207ENST00000429896 USP28Q96RU2 1077 aa14.36□□□□□ -0.11
PTCH1-207ENST00000429896 TEX13BQ9BXU2 312 aa14.36□□□□□ -0.11
PTCH1-207ENST00000429896 TBC1D7Q9P0N9 293 aa14.36□□□□□ -0.11
PTCH1-207ENST00000429896 ZNF202O95125 648 aa14.35□□□□□ -0.11
PTCH1-207ENST00000429896 KIF4AO95239 1232 aa14.35□□□□□ -0.11
PTCH1-207ENST00000429896 ADGRA1Q86SQ6 560 aa14.35□□□□□ -0.11
PTCH1-207ENST00000429896 CTNND2Q9UQB3 1225 aa14.35□□□□□ -0.11
PTCH1-207ENST00000429896 CYP4A11Q02928 519 aa14.35□□□□□ -0.11
PTCH1-207ENST00000429896 DNAJC25Q9H1X3 360 aa14.35□□□□□ -0.11
PTCH1-207ENST00000429896 STOX1Q6ZVD7 989 aa14.35□□□□□ -0.11
PTCH1-207ENST00000429896 CCDC91Q7Z6B0 441 aa14.35□□□□□ -0.11
PTCH1-207ENST00000429896 AOPEPQ8N6M6 819 aa14.35□□□□□ -0.11
PTCH1-207ENST00000429896 GPRC5AQ8NFJ5 357 aa14.35□□□□□ -0.11
PTCH1-207ENST00000429896 TMCO3Q6UWJ1 677 aa14.35□□□□□ -0.11
PTCH1-207ENST00000429896 SPAG5Q96R06 1193 aa14.35□□□□□ -0.11
PTCH1-207ENST00000429896 DDTLA6NHG4 134 aaPredicted RBP14.35□□□□□ -0.11
PTCH1-207ENST00000429896 CDCA5Q96FF9 252 aa14.35□□□□□ -0.11
PTCH1-207ENST00000429896 IWS1Q96ST2 819 aa14.35□□□□□ -0.11
PTCH1-207ENST00000429896 BIRC3Q13489 604 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms