RNA–Protein interactions for RNA: ENST00000429344.6

CACTIN-203, Transcript of cactin, spliceosome C complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CACTIN, Length 3,612 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACTIN-203ENST00000429344 TMTC3Q6ZXV5 915 aa16.64■□□□□ 0.25
CACTIN-203ENST00000429344 CCDC42Q96M95 316 aa16.64■□□□□ 0.25
CACTIN-203ENST00000429344 POLLQ9UGP5 575 aa16.64■□□□□ 0.25
CACTIN-203ENST00000429344 GOLGA6BA6NDN3 693 aa16.64■□□□□ 0.25
CACTIN-203ENST00000429344 PSMA7O14818 248 aa16.64■□□□□ 0.25
CACTIN-203ENST00000429344 ATP1A2P50993 1020 aa16.64■□□□□ 0.25
CACTIN-203ENST00000429344 KIF5AQ12840 1032 aa16.64■□□□□ 0.25
CACTIN-203ENST00000429344 SEC23AQ15436 765 aa16.64■□□□□ 0.25
CACTIN-203ENST00000429344 TBC1D22AQ8WUA7 517 aa16.64■□□□□ 0.25
CACTIN-203ENST00000429344 AKR1B10O60218 316 aa16.63■□□□□ 0.25
CACTIN-203ENST00000429344 CYLC1P35663 651 aaPredicted RBP16.63■□□□□ 0.25
CACTIN-203ENST00000429344 ARID5AQ03989 594 aa16.63■□□□□ 0.25
CACTIN-203ENST00000429344 INF2Q27J81 1249 aa16.63■□□□□ 0.25
CACTIN-203ENST00000429344 SRBD1Q8N5C6 995 aaKnown RBP16.63■□□□□ 0.25
CACTIN-203ENST00000429344 FAM76AQ8TAV0 307 aa16.63■□□□□ 0.25
CACTIN-203ENST00000429344 ANAPC4Q9UJX5 808 aa16.63■□□□□ 0.25
CACTIN-203ENST00000429344 RAB21Q9UL25 225 aa16.63■□□□□ 0.25
CACTIN-203ENST00000429344 GTPBP6O43824 516 aaPredicted RBP16.63■□□□□ 0.25
CACTIN-203ENST00000429344 TROAPQ12815 778 aa16.63■□□□□ 0.25
CACTIN-203ENST00000429344 C12orf60Q5U649 245 aa16.63■□□□□ 0.25
CACTIN-203ENST00000429344 USP40Q9NVE5 1235 aa16.63■□□□□ 0.25
CACTIN-203ENST00000429344 LRWD1Q9UFC0 647 aa16.63■□□□□ 0.25
CACTIN-203ENST00000429344 RWDD2AQ9UIY3 292 aa16.63■□□□□ 0.25
CACTIN-203ENST00000429344 REXO2Q9Y3B8 237 aaKnown RBP16.63■□□□□ 0.25
CACTIN-203ENST00000429344 MYH15Q9Y2K3 1946 aa16.63■□□□□ 0.25
CACTIN-203ENST00000429344 COL1A1P02452 1464 aaPredicted RBP16.63■□□□□ 0.25
CACTIN-203ENST00000429344 H0YHG0 523 aa16.63■□□□□ 0.25
CACTIN-203ENST00000429344 GNAQP50148 359 aa16.63■□□□□ 0.25
CACTIN-203ENST00000429344 STAG2Q8N3U4 1231 aa16.63■□□□□ 0.25
CACTIN-203ENST00000429344 HNRNPLLQ8WVV9 542 aaKnown RBP16.63■□□□□ 0.25
CACTIN-203ENST00000429344 IFT81Q8WYA0 676 aa16.63■□□□□ 0.25
CACTIN-203ENST00000429344 MTRQ99707 1265 aa16.63■□□□□ 0.25
CACTIN-203ENST00000429344 PHF20Q9BVI0 1012 aa16.63■□□□□ 0.25
CACTIN-203ENST00000429344 UBA5Q9GZZ9 404 aa16.63■□□□□ 0.25
CACTIN-203ENST00000429344 PLEKP08567 350 aaPredicted RBP16.62■□□□□ 0.25
CACTIN-203ENST00000429344 USP14P54578 494 aa16.62■□□□□ 0.25
CACTIN-203ENST00000429344 TDRD12Q587J7 1177 aaKnown RBP16.62■□□□□ 0.25
CACTIN-203ENST00000429344 DTHD1Q6ZMT9 781 aa16.62■□□□□ 0.25
CACTIN-203ENST00000429344 LRRC47Q8N1G4 583 aaKnown RBP16.62■□□□□ 0.25
CACTIN-203ENST00000429344 MB21D1Q8N884 522 aa16.62■□□□□ 0.25
CACTIN-203ENST00000429344 NOC4LQ9BVI4 516 aaKnown RBP16.62■□□□□ 0.25
CACTIN-203ENST00000429344 SELENOOQ9BVL4 669 aa16.62■□□□□ 0.25
CACTIN-203ENST00000429344 HAUS4Q9H6D7 363 aa16.62■□□□□ 0.25
CACTIN-203ENST00000429344 GPCPD1Q9NPB8 672 aa16.62■□□□□ 0.25
CACTIN-203ENST00000429344 RMND1Q9NWS8 449 aa16.62■□□□□ 0.25
CACTIN-203ENST00000429344 PRPF3O43395 683 aaKnown RBP16.62■□□□□ 0.25
CACTIN-203ENST00000429344 PDE4DQ08499 809 aa16.62■□□□□ 0.25
CACTIN-203ENST00000429344 C2CD5Q86YS7 1000 aa16.62■□□□□ 0.25
CACTIN-203ENST00000429344 MLXIPQ9HAP2 919 aa16.62■□□□□ 0.25
CACTIN-203ENST00000429344 SPEF2Q9C093 1822 aa16.62■□□□□ 0.25
CACTIN-203ENST00000429344 PBX1P40424 430 aa16.62■□□□□ 0.25
CACTIN-203ENST00000429344 CACNB3P54284 484 aa16.62■□□□□ 0.25
CACTIN-203ENST00000429344 KRT83P78385 493 aa16.62■□□□□ 0.25
CACTIN-203ENST00000429344 ZNF658Q5TYW1 1059 aaPredicted RBP16.62■□□□□ 0.25
CACTIN-203ENST00000429344 USP17L2Q6R6M4 530 aa16.62■□□□□ 0.25
CACTIN-203ENST00000429344 TUBGCP2Q9BSJ2 902 aa16.62■□□□□ 0.25
CACTIN-203ENST00000429344 RCCD1A6NED2 376 aa16.61■□□□□ 0.25
CACTIN-203ENST00000429344 KLRF2D3W0D1 207 aa16.61■□□□□ 0.25
CACTIN-203ENST00000429344 BUB1O43683 1085 aa16.61■□□□□ 0.25
CACTIN-203ENST00000429344 CALML3P27482 149 aa16.61■□□□□ 0.25
CACTIN-203ENST00000429344 HDAC7Q8WUI4 952 aa16.61■□□□□ 0.25
CACTIN-203ENST00000429344 FRMPD2Q68DX3 1309 aaPredicted RBP16.61■□□□□ 0.25
CACTIN-203ENST00000429344 MYH3P11055 1940 aa16.61■□□□□ 0.25
CACTIN-203ENST00000429344 NCK2O43639 380 aa16.61■□□□□ 0.25
CACTIN-203ENST00000429344 ORC4O43929 436 aa16.61■□□□□ 0.25
CACTIN-203ENST00000429344 BMP15O95972 392 aa16.61■□□□□ 0.25
CACTIN-203ENST00000429344 HLA-DOAP06340 250 aa16.61■□□□□ 0.25
CACTIN-203ENST00000429344 CDK8P49336 464 aa16.61■□□□□ 0.25
CACTIN-203ENST00000429344 SPATA20Q8TB22 786 aa16.61■□□□□ 0.25
CACTIN-203ENST00000429344 BCAS4Q8TDM0 211 aa16.61■□□□□ 0.25
CACTIN-203ENST00000429344 RRP36Q96EU6 259 aaKnown RBP16.61■□□□□ 0.25
CACTIN-203ENST00000429344 NHEJ1Q9H9Q4 299 aaPredicted RBP16.61■□□□□ 0.25
CACTIN-203ENST00000429344 MED4Q9NPJ6 270 aa16.61■□□□□ 0.25
CACTIN-203ENST00000429344 MOCS3O95396 460 aa16.6■□□□□ 0.25
CACTIN-203ENST00000429344 SSBP05455 408 aaKnown RBP eCLIP16.6■□□□□ 0.25
CACTIN-203ENST00000429344 ALDH1B1P30837 517 aa16.6■□□□□ 0.25
CACTIN-203ENST00000429344 HERVK_113P62684 666 aa16.6■□□□□ 0.25
CACTIN-203ENST00000429344 LETM2Q2VYF4 491 aa16.6■□□□□ 0.25
CACTIN-203ENST00000429344 PACS2Q86VP3 889 aa16.6■□□□□ 0.25
CACTIN-203ENST00000429344 LIMA1Q9UHB6 759 aaKnown RBP16.6■□□□□ 0.25
CACTIN-203ENST00000429344 COL22A1Q8NFW1 1626 aaPredicted RBP16.6■□□□□ 0.25
CACTIN-203ENST00000429344 H0YIN7 160 aa16.6■□□□□ 0.25
CACTIN-203ENST00000429344 PDE2AO00408 941 aaPredicted RBP16.6■□□□□ 0.25
CACTIN-203ENST00000429344 PDE6BP35913 854 aa16.6■□□□□ 0.25
CACTIN-203ENST00000429344 COL23A1Q86Y22 540 aaPredicted RBP16.6■□□□□ 0.25
CACTIN-203ENST00000429344 SECISBP2LQ93073 1101 aaKnown RBP16.6■□□□□ 0.25
CACTIN-203ENST00000429344 PSD3Q9NYI0 1048 aa16.6■□□□□ 0.25
CACTIN-203ENST00000429344 HPCAL4Q9UM19 191 aa16.6■□□□□ 0.25
CACTIN-203ENST00000429344 NWD2Q9ULI1 1742 aa16.6■□□□□ 0.25
CACTIN-203ENST00000429344 TAF1P21675 1872 aa16.6■□□□□ 0.25
CACTIN-203ENST00000429344 GNGT1P63211 74 aa16.6■□□□□ 0.25
CACTIN-203ENST00000429344 CKAP4Q07065 602 aaKnown RBP16.6■□□□□ 0.25
CACTIN-203ENST00000429344 SF3A3Q12874 501 aaKnown RBP eCLIP16.6■□□□□ 0.25
CACTIN-203ENST00000429344 DYMQ7RTS9 669 aa16.6■□□□□ 0.25
CACTIN-203ENST00000429344 CLEC10AQ8IUN9 316 aa16.6■□□□□ 0.25
CACTIN-203ENST00000429344 MTA3Q9BTC8 594 aa16.6■□□□□ 0.25
CACTIN-203ENST00000429344 ESYT3A0FGR9 886 aa16.59■□□□□ 0.25
CACTIN-203ENST00000429344 TUBB2AQ13885 445 aa16.59■□□□□ 0.25
CACTIN-203ENST00000429344 IL17AQ16552 155 aa16.59■□□□□ 0.25
CACTIN-203ENST00000429344 CCDC47Q96A33 483 aaKnown RBP16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms