RNA–Protein interactions for RNA: ENST00000428450.5

DDX39B-209, Transcript of DExD-box helicase 39B, humanhuman

TSL 4

Gene DDX39B, Length 633 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-209ENST00000428450 DMDP11532 3685 aa13.79□□□□□ -0.2
DDX39B-209ENST00000428450 PTPRZ1P23471 2315 aaPredicted RBP13.79□□□□□ -0.2
DDX39B-209ENST00000428450 GOLIM4O00461 696 aa13.79□□□□□ -0.2
DDX39B-209ENST00000428450 RASA1P20936 1047 aa13.79□□□□□ -0.2
DDX39B-209ENST00000428450 IRS1P35568 1242 aa13.79□□□□□ -0.2
DDX39B-209ENST00000428450 FOXK2Q01167 660 aa13.79□□□□□ -0.2
DDX39B-209ENST00000428450 BFSP2Q13515 415 aa13.79□□□□□ -0.2
DDX39B-209ENST00000428450 TCTN1Q2MV58 587 aa13.79□□□□□ -0.2
DDX39B-209ENST00000428450 IER5LQ5T953 404 aa13.79□□□□□ -0.2
DDX39B-209ENST00000428450 NFRKBQ6P4R8 1299 aa13.79□□□□□ -0.2
DDX39B-209ENST00000428450 ADHFE1Q8IWW8 467 aa13.79□□□□□ -0.2
DDX39B-209ENST00000428450 MKL1Q969V6 931 aa13.79□□□□□ -0.2
DDX39B-209ENST00000428450 CLUAP1Q96AJ1 413 aa13.79□□□□□ -0.2
DDX39B-209ENST00000428450 MTG1Q9BT17 334 aaPredicted RBP13.79□□□□□ -0.2
DDX39B-209ENST00000428450 VTA1Q9NP79 307 aa13.79□□□□□ -0.2
DDX39B-209ENST00000428450 RNF146Q9NTX7 359 aa13.79□□□□□ -0.2
DDX39B-209ENST00000428450 CLIP2Q9UDT6 1046 aa13.79□□□□□ -0.2
DDX39B-209ENST00000428450 DCHS1Q96JQ0 3298 aa13.79□□□□□ -0.2
DDX39B-209ENST00000428450 TRIP12Q14669 1992 aaPredicted RBP13.78□□□□□ -0.2
DDX39B-209ENST00000428450 IGKV6D-41A0A0C4DH26 115 aa13.78□□□□□ -0.2
DDX39B-209ENST00000428450 RBAK-RBAKDNI3L0D1 243 aa13.78□□□□□ -0.2
DDX39B-209ENST00000428450 CHGBP05060 677 aa13.78□□□□□ -0.2
DDX39B-209ENST00000428450 MYL3P08590 195 aa13.78□□□□□ -0.2
DDX39B-209ENST00000428450 ADD2P35612 726 aa13.78□□□□□ -0.2
DDX39B-209ENST00000428450 COL19A1Q14993 1142 aa13.78□□□□□ -0.2
DDX39B-209ENST00000428450 LRRFIP1Q32MZ4 808 aaKnown RBP13.78□□□□□ -0.2
DDX39B-209ENST00000428450 FAM47CQ5HY64 1035 aa13.78□□□□□ -0.2
DDX39B-209ENST00000428450 AMOTL1Q8IY63 956 aa13.78□□□□□ -0.2
DDX39B-209ENST00000428450 PURBQ96QR8 312 aaKnown RBP13.78□□□□□ -0.2
DDX39B-209ENST00000428450 CTAGE1Q96RT6 745 aa13.78□□□□□ -0.2
DDX39B-209ENST00000428450 C1orf115Q9H7X2 142 aa13.78□□□□□ -0.2
DDX39B-209ENST00000428450 CYP39A1Q9NYL5 469 aa13.78□□□□□ -0.2
DDX39B-209ENST00000428450 SIP14410 1827 aa13.78□□□□□ -0.2
DDX39B-209ENST00000428450 IPO8O15397 1037 aaKnown RBP13.77□□□□□ -0.21
DDX39B-209ENST00000428450 CXCL10P02778 98 aa13.77□□□□□ -0.21
DDX39B-209ENST00000428450 FDX1P10109 184 aa13.77□□□□□ -0.21
DDX39B-209ENST00000428450 CPT1AP50416 773 aa13.77□□□□□ -0.21
DDX39B-209ENST00000428450 PTPN5P54829 565 aa13.77□□□□□ -0.21
DDX39B-209ENST00000428450 PTPN11Q06124 597 aaPredicted RBP13.77□□□□□ -0.21
DDX39B-209ENST00000428450 TCF15Q12870 199 aa13.77□□□□□ -0.21
DDX39B-209ENST00000428450 HERC4Q5GLZ8 1057 aaPredicted RBP13.77□□□□□ -0.21
DDX39B-209ENST00000428450 TMEM57Q8N5G2 664 aa13.77□□□□□ -0.21
DDX39B-209ENST00000428450 MRPL38Q96DV4 380 aaKnown RBP13.77□□□□□ -0.21
DDX39B-209ENST00000428450 TRERF1Q96PN7 1200 aa13.77□□□□□ -0.21
DDX39B-209ENST00000428450 C17orf80Q9BSJ5 609 aa13.77□□□□□ -0.21
DDX39B-209ENST00000428450 WDR11Q9BZH6 1224 aa13.77□□□□□ -0.21
DDX39B-209ENST00000428450 RBM47A0AV96 593 aaKnown RBP13.76□□□□□ -0.21
DDX39B-209ENST00000428450 TKFCQ3LXA3 575 aa13.76□□□□□ -0.21
DDX39B-209ENST00000428450 MUM1L1Q5H9M0 696 aa13.76□□□□□ -0.21
DDX39B-209ENST00000428450 CNKSR3Q6P9H4 555 aa13.76□□□□□ -0.21
DDX39B-209ENST00000428450 BMP8AQ7Z5Y6 402 aa13.76□□□□□ -0.21
DDX39B-209ENST00000428450 RPAP2Q8IXW5 612 aaPredicted RBP13.76□□□□□ -0.21
DDX39B-209ENST00000428450 FBXO22Q8NEZ5 403 aa13.76□□□□□ -0.21
DDX39B-209ENST00000428450 AFAP1L1Q8TED9 768 aa13.76□□□□□ -0.21
DDX39B-209ENST00000428450 PABPC5Q96DU9 382 aaKnown RBP13.76□□□□□ -0.21
DDX39B-209ENST00000428450 DNAJC2Q99543 621 aaKnown RBP13.76□□□□□ -0.21
DDX39B-209ENST00000428450 UPF3BQ9BZI7 483 aaKnown RBP13.76□□□□□ -0.21
DDX39B-209ENST00000428450 ALG13Q9NP73 1137 aaKnown RBP13.76□□□□□ -0.21
DDX39B-209ENST00000428450 GPHNQ9NQX3 736 aaPredicted RBP13.76□□□□□ -0.21
DDX39B-209ENST00000428450 MUTYHQ9UIF7 546 aa13.76□□□□□ -0.21
DDX39B-209ENST00000428450 SLC4A4Q9Y6R1 1079 aa13.76□□□□□ -0.21
DDX39B-209ENST00000428450 MYO7AQ13402 2215 aa13.76□□□□□ -0.21
DDX39B-209ENST00000428450 LCTP09848 1927 aa13.75□□□□□ -0.21
DDX39B-209ENST00000428450 ABHD14A-ACY1A0A1B0GW23 586 aa13.75□□□□□ -0.21
DDX39B-209ENST00000428450 A6NJR5 290 aa13.75□□□□□ -0.21
DDX39B-209ENST00000428450 TMEM232C9JQI7 657 aa13.75□□□□□ -0.21
DDX39B-209ENST00000428450 NBNO60934 754 aa13.75□□□□□ -0.21
DDX39B-209ENST00000428450 BMP3P12645 472 aa13.75□□□□□ -0.21
DDX39B-209ENST00000428450 GMCL1P1Q8NEA9 526 aa13.75□□□□□ -0.21
DDX39B-209ENST00000428450 CAGE1Q8TC20 777 aa13.75□□□□□ -0.21
DDX39B-209ENST00000428450 DHX38Q92620 1227 aaKnown RBP13.75□□□□□ -0.21
DDX39B-209ENST00000428450 FRAT1Q92837 279 aaPredicted RBP13.75□□□□□ -0.21
DDX39B-209ENST00000428450 CTNNA3Q9UI47 895 aa13.75□□□□□ -0.21
DDX39B-209ENST00000428450 SYNPO2Q9UMS6 1093 aa13.75□□□□□ -0.21
DDX39B-209ENST00000428450 FAM50BQ9Y247 325 aa13.75□□□□□ -0.21
DDX39B-209ENST00000428450 EXOC6BQ9Y2D4 811 aa13.75□□□□□ -0.21
DDX39B-209ENST00000428450 ALAS1P13196 640 aa13.74□□□□□ -0.21
DDX39B-209ENST00000428450 SELPP16109 830 aa13.74□□□□□ -0.21
DDX39B-209ENST00000428450 LTBRP36941 435 aa13.74□□□□□ -0.21
DDX39B-209ENST00000428450 RBL2Q08999 1139 aa13.74□□□□□ -0.21
DDX39B-209ENST00000428450 PTGISQ16647 500 aa13.74□□□□□ -0.21
DDX39B-209ENST00000428450 SBK1Q52WX2 424 aa13.74□□□□□ -0.21
DDX39B-209ENST00000428450 TCEAL5Q5H9L2 206 aa13.74□□□□□ -0.21
DDX39B-209ENST00000428450 FAM117BQ6P1L5 589 aa13.74□□□□□ -0.21
DDX39B-209ENST00000428450 BANK1Q8NDB2 785 aa13.74□□□□□ -0.21
DDX39B-209ENST00000428450 OR6J1Q8NGC5 347 aa13.74□□□□□ -0.21
DDX39B-209ENST00000428450 EDAQ92838 391 aa13.74□□□□□ -0.21
DDX39B-209ENST00000428450 CEP95Q96GE4 821 aa13.74□□□□□ -0.21
DDX39B-209ENST00000428450 DDRGK1Q96HY6 314 aa13.74□□□□□ -0.21
DDX39B-209ENST00000428450 MKNK2Q9HBH9 465 aa13.74□□□□□ -0.21
DDX39B-209ENST00000428450 IL1RAPL2Q9NP60 686 aa13.74□□□□□ -0.21
DDX39B-209ENST00000428450 MTMR4Q9NYA4 1195 aa13.74□□□□□ -0.21
DDX39B-209ENST00000428450 ARPP21Q9UBL0 812 aaPredicted RBP13.74□□□□□ -0.21
DDX39B-209ENST00000428450 NOD1Q9Y239 953 aa13.74□□□□□ -0.21
DDX39B-209ENST00000428450 RIF1Q5UIP0 2472 aaKnown RBP13.73□□□□□ -0.21
DDX39B-209ENST00000428450 MYH4Q9Y623 1939 aa13.73□□□□□ -0.21
DDX39B-209ENST00000428450 GFRA3O60609 400 aa13.73□□□□□ -0.21
DDX39B-209ENST00000428450 KPNA6O60684 536 aa13.73□□□□□ -0.21
DDX39B-209ENST00000428450 STAT2P52630 851 aa13.73□□□□□ -0.21
DDX39B-209ENST00000428450 SMAD2Q15796 467 aaKnown RBP13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms