RNA–Protein interactions for RNA: ENST00000428404.5

TRIM39-207, Transcript of tripartite motif containing 39, humanhuman

TSL 2

Gene TRIM39, Length 427 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-207ENST00000428404 MORF4L1Q9UBU8 362 aa14.3□□□□□ -0.12
TRIM39-207ENST00000428404 ADGRA2Q96PE1 1338 aa14.3□□□□□ -0.12
TRIM39-207ENST00000428404 CCDC194A0A1B0GVG4 234 aa14.29□□□□□ -0.12
TRIM39-207ENST00000428404 COPB2P35606 906 aa14.29□□□□□ -0.12
TRIM39-207ENST00000428404 ERVK-9P63128 1117 aa14.29□□□□□ -0.12
TRIM39-207ENST00000428404 ERVK-24P63145 666 aa14.29□□□□□ -0.12
TRIM39-207ENST00000428404 AP3B2Q13367 1082 aa14.29□□□□□ -0.12
TRIM39-207ENST00000428404 PLS1Q14651 629 aa14.29□□□□□ -0.12
TRIM39-207ENST00000428404 SMCR8Q8TEV9 937 aaPredicted RBP14.29□□□□□ -0.12
TRIM39-207ENST00000428404 CRYGNQ8WXF5 182 aa14.29□□□□□ -0.12
TRIM39-207ENST00000428404 USP28Q96RU2 1077 aa14.29□□□□□ -0.12
TRIM39-207ENST00000428404 PAGR1Q9BTK6 254 aa14.29□□□□□ -0.12
TRIM39-207ENST00000428404 HOMER2Q9NSB8 354 aa14.29□□□□□ -0.12
TRIM39-207ENST00000428404 RTEL1Q9NZ71 1219 aa14.29□□□□□ -0.12
TRIM39-207ENST00000428404 TFIP11Q9UBB9 837 aaKnown RBP14.29□□□□□ -0.12
TRIM39-207ENST00000428404 COL11A1P12107 1806 aaPredicted RBP14.29□□□□□ -0.12
TRIM39-207ENST00000428404 SLC25A27O95847 323 aa14.28□□□□□ -0.12
TRIM39-207ENST00000428404 CFBP00751 764 aa14.28□□□□□ -0.12
TRIM39-207ENST00000428404 HOXA13P31271 388 aaPredicted RBP14.28□□□□□ -0.12
TRIM39-207ENST00000428404 NASPP49321 788 aaPredicted RBP14.28□□□□□ -0.12
TRIM39-207ENST00000428404 KRT85P78386 507 aa14.28□□□□□ -0.12
TRIM39-207ENST00000428404 NONOQ15233 471 aaKnown RBP eCLIP14.28□□□□□ -0.12
TRIM39-207ENST00000428404 REM2Q8IYK8 340 aaPredicted RBP14.28□□□□□ -0.12
TRIM39-207ENST00000428404 SHCBP1Q8NEM2 672 aa14.28□□□□□ -0.12
TRIM39-207ENST00000428404 GPRC5AQ8NFJ5 357 aa14.28□□□□□ -0.12
TRIM39-207ENST00000428404 GBP4Q96PP9 640 aa14.28□□□□□ -0.12
TRIM39-207ENST00000428404 ACAD9Q9H845 621 aa14.28□□□□□ -0.12
TRIM39-207ENST00000428404 POLR3EQ9NVU0 708 aa14.28□□□□□ -0.12
TRIM39-207ENST00000428404 FBXO40Q9UH90 709 aa14.28□□□□□ -0.12
TRIM39-207ENST00000428404 RCOR1Q9UKL0 485 aa14.28□□□□□ -0.12
TRIM39-207ENST00000428404 CFAP45Q9UL16 551 aa14.28□□□□□ -0.12
TRIM39-207ENST00000428404 CNPY2Q9Y2B0 182 aa14.28□□□□□ -0.12
TRIM39-207ENST00000428404 WNT7AO00755 349 aa14.27□□□□□ -0.13
TRIM39-207ENST00000428404 AOC2O75106 756 aa14.27□□□□□ -0.13
TRIM39-207ENST00000428404 BCRP11274 1271 aa14.27□□□□□ -0.13
TRIM39-207ENST00000428404 RPS6P62753 249 aaKnown RBP14.27□□□□□ -0.13
TRIM39-207ENST00000428404 INF2Q27J81 1249 aa14.27□□□□□ -0.13
TRIM39-207ENST00000428404 ANO1Q5XXA6 986 aa14.27□□□□□ -0.13
TRIM39-207ENST00000428404 PAXIP1Q6ZW49 1069 aaPredicted RBP14.27□□□□□ -0.13
TRIM39-207ENST00000428404 TMEM87AQ8NBN3 555 aa14.27□□□□□ -0.13
TRIM39-207ENST00000428404 SYTL5Q8TDW5 730 aaPredicted RBP14.27□□□□□ -0.13
TRIM39-207ENST00000428404 TBCKQ8TEA7 893 aa14.27□□□□□ -0.13
TRIM39-207ENST00000428404 ANO3Q9BYT9 981 aa14.27□□□□□ -0.13
TRIM39-207ENST00000428404 FTOQ9C0B1 505 aaKnown RBP eCLIP14.27□□□□□ -0.13
TRIM39-207ENST00000428404 SCAND2PQ9GZW5 306 aaPredicted RBP14.27□□□□□ -0.13
TRIM39-207ENST00000428404 R3HDMLQ9H3Y0 253 aa14.27□□□□□ -0.13
TRIM39-207ENST00000428404 MROH8Q9H579 483 aa14.27□□□□□ -0.13
TRIM39-207ENST00000428404 COL20A1Q9P218 1284 aa14.27□□□□□ -0.13
TRIM39-207ENST00000428404 NOL7Q9UMY1 257 aaKnown RBP14.27□□□□□ -0.13
TRIM39-207ENST00000428404 PCDHB6Q9Y5E3 794 aa14.27□□□□□ -0.13
TRIM39-207ENST00000428404 CLIC4Q9Y696 253 aa14.27□□□□□ -0.13
TRIM39-207ENST00000428404 MORC2Q9Y6X9 1032 aaPredicted RBP14.27□□□□□ -0.13
TRIM39-207ENST00000428404 YEATS4O95619 227 aa14.26□□□□□ -0.13
TRIM39-207ENST00000428404 ERCC3P19447 782 aa14.26□□□□□ -0.13
TRIM39-207ENST00000428404 SREBF1P36956 1147 aa14.26□□□□□ -0.13
TRIM39-207ENST00000428404 USP11P51784 963 aa14.26□□□□□ -0.13
TRIM39-207ENST00000428404 BAATQ14032 418 aaPredicted RBP14.26□□□□□ -0.13
TRIM39-207ENST00000428404 PTPAQ15257 358 aa14.26□□□□□ -0.13
TRIM39-207ENST00000428404 FAM110CQ1W6H9 321 aa14.26□□□□□ -0.13
TRIM39-207ENST00000428404 C17orf99Q6UX52 265 aa14.26□□□□□ -0.13
TRIM39-207ENST00000428404 RNF207Q6ZRF8 634 aa14.26□□□□□ -0.13
TRIM39-207ENST00000428404 NEK8Q86SG6 692 aa14.26□□□□□ -0.13
TRIM39-207ENST00000428404 ANKRD13CQ8N6S4 541 aa14.26□□□□□ -0.13
TRIM39-207ENST00000428404 LINC00301Q8NCQ3 95 aa14.26□□□□□ -0.13
TRIM39-207ENST00000428404 LEO1Q8WVC0 666 aaPredicted RBP14.26□□□□□ -0.13
TRIM39-207ENST00000428404 PGBD1Q96JS3 809 aa14.26□□□□□ -0.13
TRIM39-207ENST00000428404 A1CFQ9NQ94 594 aaKnown RBP14.26□□□□□ -0.13
TRIM39-207ENST00000428404 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.26□□□□□ -0.13
TRIM39-207ENST00000428404 CYP39A1Q9NYL5 469 aa14.26□□□□□ -0.13
TRIM39-207ENST00000428404 FRMPD4Q14CM0 1322 aa14.25□□□□□ -0.13
TRIM39-207ENST00000428404 RPTORQ8N122 1335 aa14.25□□□□□ -0.13
TRIM39-207ENST00000428404 CYP3A7-CYP3A51PA0A087WV96 503 aa14.25□□□□□ -0.13
TRIM39-207ENST00000428404 SPDYE3A6NKU9 549 aa14.25□□□□□ -0.13
TRIM39-207ENST00000428404 CA12O43570 354 aa14.25□□□□□ -0.13
TRIM39-207ENST00000428404 TLR2O60603 784 aa14.25□□□□□ -0.13
TRIM39-207ENST00000428404 ALDH1A1P00352 501 aa14.25□□□□□ -0.13
TRIM39-207ENST00000428404 CYP3A4P08684 503 aa14.25□□□□□ -0.13
TRIM39-207ENST00000428404 CYP3A7P24462 503 aa14.25□□□□□ -0.13
TRIM39-207ENST00000428404 MCM4P33991 863 aa14.25□□□□□ -0.13
TRIM39-207ENST00000428404 MAP2K2P36507 400 aa14.25□□□□□ -0.13
TRIM39-207ENST00000428404 VEGFBP49765 207 aa14.25□□□□□ -0.13
TRIM39-207ENST00000428404 CCNA1P78396 465 aa14.25□□□□□ -0.13
TRIM39-207ENST00000428404 GRM1Q13255 1194 aa14.25□□□□□ -0.13
TRIM39-207ENST00000428404 NBR1Q14596 966 aa14.25□□□□□ -0.13
TRIM39-207ENST00000428404 SLC39A14Q15043 492 aa14.25□□□□□ -0.13
TRIM39-207ENST00000428404 SF3A1Q15459 793 aaKnown RBP14.25□□□□□ -0.13
TRIM39-207ENST00000428404 TAF1CQ15572 869 aaPredicted RBP14.25□□□□□ -0.13
TRIM39-207ENST00000428404 TTC38Q5R3I4 469 aa14.25□□□□□ -0.13
TRIM39-207ENST00000428404 NSMFQ6X4W1 530 aa14.25□□□□□ -0.13
TRIM39-207ENST00000428404 SLC30A10Q6XR72 485 aa14.25□□□□□ -0.13
TRIM39-207ENST00000428404 FCHSD1Q86WN1 690 aa14.25□□□□□ -0.13
TRIM39-207ENST00000428404 C4orf32Q8N8J7 132 aa14.25□□□□□ -0.13
TRIM39-207ENST00000428404 PORCNQ9H237 461 aa14.25□□□□□ -0.13
TRIM39-207ENST00000428404 ZFYVE28Q9HCC9 887 aa14.25□□□□□ -0.13
TRIM39-207ENST00000428404 PFASO15067 1338 aa14.24□□□□□ -0.13
TRIM39-207ENST00000428404 ELP1O95163 1332 aa14.24□□□□□ -0.13
TRIM39-207ENST00000428404 NCLP19338 710 aaKnown RBP14.24□□□□□ -0.13
TRIM39-207ENST00000428404 ATP2B1P20020 1258 aa14.24□□□□□ -0.13
TRIM39-207ENST00000428404 CIITAP33076 1130 aa14.24□□□□□ -0.13
TRIM39-207ENST00000428404 ARHGAP4P98171 946 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms