RNA–Protein interactions for RNA: ENST00000428313.5

C9orf3-206, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best)

Gene C9orf3, Length 2,288 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-206ENST00000428313 MYH10P35580 1976 aa17.78■□□□□ 0.44
C9orf3-206ENST00000428313 F8W031 263 aaPredicted RBP17.77■□□□□ 0.44
C9orf3-206ENST00000428313 CASP1P29466 404 aa17.77■□□□□ 0.44
C9orf3-206ENST00000428313 HOXC9P31274 260 aa17.77■□□□□ 0.44
C9orf3-206ENST00000428313 CYB5RLQ6IPT4 315 aa17.77■□□□□ 0.44
C9orf3-206ENST00000428313 PNMA8AQ86V59 439 aaPredicted RBP17.77■□□□□ 0.44
C9orf3-206ENST00000428313 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.77■□□□□ 0.44
C9orf3-206ENST00000428313 LRRC45Q96CN5 670 aa17.77■□□□□ 0.44
C9orf3-206ENST00000428313 CHMP6Q96FZ7 201 aa17.77■□□□□ 0.44
C9orf3-206ENST00000428313 LGR6Q9HBX8 967 aa17.77■□□□□ 0.44
C9orf3-206ENST00000428313 RGL1Q9NZL6 768 aa17.77■□□□□ 0.44
C9orf3-206ENST00000428313 GRID2IPA4D2P6 1211 aa17.77■□□□□ 0.43
C9orf3-206ENST00000428313 ZNF213O14771 459 aa17.77■□□□□ 0.43
C9orf3-206ENST00000428313 ZBTB43O43298 467 aa17.77■□□□□ 0.43
C9orf3-206ENST00000428313 TMOD1P28289 359 aa17.77■□□□□ 0.43
C9orf3-206ENST00000428313 FKBP15Q5T1M5 1219 aa17.77■□□□□ 0.43
C9orf3-206ENST00000428313 IRF2BP1Q8IU81 584 aa17.77■□□□□ 0.43
C9orf3-206ENST00000428313 GALNT15Q8N3T1 639 aa17.77■□□□□ 0.43
C9orf3-206ENST00000428313 SMCR8Q8TEV9 937 aaPredicted RBP17.77■□□□□ 0.43
C9orf3-206ENST00000428313 NOC3LQ8WTT2 800 aaKnown RBP17.77■□□□□ 0.43
C9orf3-206ENST00000428313 GOLGA6L10A0A0M3HER8 536 aa17.76■□□□□ 0.43
C9orf3-206ENST00000428313 B4DLN1 442 aa17.76■□□□□ 0.43
C9orf3-206ENST00000428313 ASAP2O43150 1006 aa17.76■□□□□ 0.43
C9orf3-206ENST00000428313 ZFYP08048 801 aaPredicted RBP17.76■□□□□ 0.43
C9orf3-206ENST00000428313 SRGNP10124 158 aa17.76■□□□□ 0.43
C9orf3-206ENST00000428313 CYP27A1Q02318 531 aa17.76■□□□□ 0.43
C9orf3-206ENST00000428313 LAMB3Q13751 1172 aa17.76■□□□□ 0.43
C9orf3-206ENST00000428313 ZNF658Q5TYW1 1059 aaPredicted RBP17.76■□□□□ 0.43
C9orf3-206ENST00000428313 DDX21Q9NR30 783 aaKnown RBP eCLIP17.76■□□□□ 0.43
C9orf3-206ENST00000428313 SMARCAL1Q9NZC9 954 aa17.76■□□□□ 0.43
C9orf3-206ENST00000428313 A0A1W2PQJ5 194 aa17.75■□□□□ 0.43
C9orf3-206ENST00000428313 GOLGA8AA7E2F4 631 aa17.75■□□□□ 0.43
C9orf3-206ENST00000428313 ZNF263O14978 683 aa17.75■□□□□ 0.43
C9orf3-206ENST00000428313 MOCS3O95396 460 aa17.75■□□□□ 0.43
C9orf3-206ENST00000428313 LCA5LO95447 670 aa17.75■□□□□ 0.43
C9orf3-206ENST00000428313 HSD17B3P37058 310 aa17.75■□□□□ 0.43
C9orf3-206ENST00000428313 ZNF844Q08AG5 666 aa17.75■□□□□ 0.43
C9orf3-206ENST00000428313 EZH1Q92800 747 aaPredicted RBP17.75■□□□□ 0.43
C9orf3-206ENST00000428313 IQCDQ96DY2 449 aa17.75■□□□□ 0.43
C9orf3-206ENST00000428313 TMEM87BQ96K49 555 aa17.75■□□□□ 0.43
C9orf3-206ENST00000428313 IFIH1Q9BYX4 1025 aaKnown RBP17.75■□□□□ 0.43
C9orf3-206ENST00000428313 PANK4Q9NVE7 773 aa17.75■□□□□ 0.43
C9orf3-206ENST00000428313 RMND1Q9NWS8 449 aa17.75■□□□□ 0.43
C9orf3-206ENST00000428313 EHD2Q9NZN4 543 aa17.75■□□□□ 0.43
C9orf3-206ENST00000428313 PCDHA13Q9Y5I0 950 aa17.75■□□□□ 0.43
C9orf3-206ENST00000428313 EID1Q9Y6B2 187 aa17.75■□□□□ 0.43
C9orf3-206ENST00000428313 DISP2A7MBM2 1401 aa17.75■□□□□ 0.43
C9orf3-206ENST00000428313 MYH7P12883 1935 aa17.75■□□□□ 0.43
C9orf3-206ENST00000428313 ESYT3A0FGR9 886 aa17.75■□□□□ 0.43
C9orf3-206ENST00000428313 PHF20L1A8MW92 1017 aa17.75■□□□□ 0.43
C9orf3-206ENST00000428313 GNAT1P11488 350 aa17.75■□□□□ 0.43
C9orf3-206ENST00000428313 NQO1P15559 274 aaKnown RBP17.75■□□□□ 0.43
C9orf3-206ENST00000428313 ABL2P42684 1182 aa17.75■□□□□ 0.43
C9orf3-206ENST00000428313 CTCFP49711 727 aaPredicted RBP17.75■□□□□ 0.43
C9orf3-206ENST00000428313 FIGNQ5HY92 759 aa17.75■□□□□ 0.43
C9orf3-206ENST00000428313 FERMT2Q96AC1 680 aa17.75■□□□□ 0.43
C9orf3-206ENST00000428313 CCDC42Q96M95 316 aa17.75■□□□□ 0.43
C9orf3-206ENST00000428313 SLC26A6Q9BXS9 759 aa17.75■□□□□ 0.43
C9orf3-206ENST00000428313 OSBPL1AQ9BXW6 950 aa17.75■□□□□ 0.43
C9orf3-206ENST00000428313 THAP9Q9H5L6 903 aa17.75■□□□□ 0.43
C9orf3-206ENST00000428313 MLXIPQ9HAP2 919 aa17.75■□□□□ 0.43
C9orf3-206ENST00000428313 FAM217BQ9NTX9 383 aaPredicted RBP17.75■□□□□ 0.43
C9orf3-206ENST00000428313 CNOT8Q9UFF9 292 aaKnown RBP17.75■□□□□ 0.43
C9orf3-206ENST00000428313 NID2Q14112 1375 aa17.75■□□□□ 0.43
C9orf3-206ENST00000428313 SPDYE3A6NKU9 549 aa17.74■□□□□ 0.43
C9orf3-206ENST00000428313 GTPBP6O43824 516 aaPredicted RBP17.74■□□□□ 0.43
C9orf3-206ENST00000428313 COBLO75128 1261 aa17.74■□□□□ 0.43
C9orf3-206ENST00000428313 MYBP10242 640 aa17.74■□□□□ 0.43
C9orf3-206ENST00000428313 CTDSPL2Q05D32 466 aa17.74■□□□□ 0.43
C9orf3-206ENST00000428313 ERMARDQ5T6L9 678 aa17.74■□□□□ 0.43
C9orf3-206ENST00000428313 TBC1D1Q86TI0 1168 aaPredicted RBP17.74■□□□□ 0.43
C9orf3-206ENST00000428313 SGMS1Q86VZ5 419 aa17.74■□□□□ 0.43
C9orf3-206ENST00000428313 MICU3Q86XE3 530 aa17.74■□□□□ 0.43
C9orf3-206ENST00000428313 SYMPKQ92797 1274 aaKnown RBP17.74■□□□□ 0.43
C9orf3-206ENST00000428313 EPSTI1Q96J88 318 aa17.74■□□□□ 0.43
C9orf3-206ENST00000428313 PYM1Q9BRP8 204 aaKnown RBP17.74■□□□□ 0.43
C9orf3-206ENST00000428313 TLR10Q9BXR5 811 aa17.74■□□□□ 0.43
C9orf3-206ENST00000428313 FAM129AQ9BZQ8 928 aa17.74■□□□□ 0.43
C9orf3-206ENST00000428313 AGPAT5Q9NUQ2 364 aa17.74■□□□□ 0.43
C9orf3-206ENST00000428313 CHCHD3Q9NX63 227 aaKnown RBP17.74■□□□□ 0.43
C9orf3-206ENST00000428313 VPS54Q9P1Q0 977 aa17.74■□□□□ 0.43
C9orf3-206ENST00000428313 ANKIB1Q9P2G1 1089 aa17.74■□□□□ 0.43
C9orf3-206ENST00000428313 AFF2P51816 1311 aa17.74■□□□□ 0.43
C9orf3-206ENST00000428313 SOS2Q07890 1332 aaPredicted RBP17.74■□□□□ 0.43
C9orf3-206ENST00000428313 RASSF10A6NK89 507 aa17.74■□□□□ 0.43
C9orf3-206ENST00000428313 PJA2O43164 708 aa17.74■□□□□ 0.43
C9orf3-206ENST00000428313 NPTXRO95502 500 aa17.74■□□□□ 0.43
C9orf3-206ENST00000428313 IFIT1P09914 478 aaKnown RBP17.74■□□□□ 0.43
C9orf3-206ENST00000428313 IFNAR1P17181 557 aa17.74■□□□□ 0.43
C9orf3-206ENST00000428313 TRIM21P19474 475 aaKnown RBP17.74■□□□□ 0.43
C9orf3-206ENST00000428313 CXCR5P32302 372 aa17.74■□□□□ 0.43
C9orf3-206ENST00000428313 MTMR3Q13615 1198 aa17.74■□□□□ 0.43
C9orf3-206ENST00000428313 ODF2Q5BJF6 829 aa17.74■□□□□ 0.43
C9orf3-206ENST00000428313 RIC3Q7Z5B4 369 aa17.74■□□□□ 0.43
C9orf3-206ENST00000428313 ISCUQ9H1K1 167 aa17.74■□□□□ 0.43
C9orf3-206ENST00000428313 ZSCAN5CA6NGD5 496 aaPredicted RBP17.73■□□□□ 0.43
C9orf3-206ENST00000428313 BMP15O95972 392 aa17.73■□□□□ 0.43
C9orf3-206ENST00000428313 RXRAP19793 462 aa17.73■□□□□ 0.43
C9orf3-206ENST00000428313 HNRNPH3P31942 346 aaKnown RBP17.73■□□□□ 0.43
C9orf3-206ENST00000428313 CUL1Q13616 776 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms