RNA–Protein interactions for RNA: ENST00000428101.6

LMO1-202, Transcript of LIM domain only 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LMO1, Length 1,038 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO1-202ENST00000428101 ARVCFO00192 962 aa31.88■■■□□ 2.69
LMO1-202ENST00000428101 FSCN1Q16658 493 aaKnown RBP31.88■■■□□ 2.69
LMO1-202ENST00000428101 KIAA1211Q6ZU35 1233 aa31.88■■■□□ 2.69
LMO1-202ENST00000428101 TBX21Q9UL17 535 aa31.88■■■□□ 2.69
LMO1-202ENST00000428101 Q9Y3F1 56 aa31.88■■■□□ 2.69
LMO1-202ENST00000428101 MROH7Q68CQ1 1323 aa31.88■■■□□ 2.69
LMO1-202ENST00000428101 EPHB4P54760 987 aa31.87■■■□□ 2.69
LMO1-202ENST00000428101 USH1GQ495M9 461 aa31.87■■■□□ 2.69
LMO1-202ENST00000428101 ADGRF4Q8IZF3 695 aa31.87■■■□□ 2.69
LMO1-202ENST00000428101 AP5M1Q9H0R1 490 aa31.87■■■□□ 2.69
LMO1-202ENST00000428101 MTMR10Q9NXD2 777 aa31.87■■■□□ 2.69
LMO1-202ENST00000428101 PTH1RQ03431 593 aa31.86■■■□□ 2.69
LMO1-202ENST00000428101 CDC37Q16543 378 aaPredicted RBP31.86■■■□□ 2.69
LMO1-202ENST00000428101 ASPRV1Q53RT3 343 aa31.86■■■□□ 2.69
LMO1-202ENST00000428101 CXCL17Q6UXB2 119 aa31.86■■■□□ 2.69
LMO1-202ENST00000428101 RUFY2Q8WXA3 655 aa31.86■■■□□ 2.69
LMO1-202ENST00000428101 UBAC1Q9BSL1 405 aa31.86■■■□□ 2.69
LMO1-202ENST00000428101 MYH6P13533 1939 aa31.86■■■□□ 2.69
LMO1-202ENST00000428101 SEC23AQ15436 765 aa31.85■■■□□ 2.69
LMO1-202ENST00000428101 DUSP28Q4G0W2 176 aa31.85■■■□□ 2.69
LMO1-202ENST00000428101 CYB5R4Q7L1T6 521 aa31.85■■■□□ 2.69
LMO1-202ENST00000428101 FAM126BQ8IXS8 530 aa31.85■■■□□ 2.69
LMO1-202ENST00000428101 RGS22Q8NE09 1264 aa31.85■■■□□ 2.69
LMO1-202ENST00000428101 RBM47A0AV96 593 aaKnown RBP31.84■■■□□ 2.69
LMO1-202ENST00000428101 TIMP1P01033 207 aa31.84■■■□□ 2.69
LMO1-202ENST00000428101 PARP1P09874 1014 aaKnown RBP31.84■■■□□ 2.69
LMO1-202ENST00000428101 SLC43A3Q8NBI5 491 aa31.84■■■□□ 2.69
LMO1-202ENST00000428101 CABYRO75952 493 aa31.83■■■□□ 2.69
LMO1-202ENST00000428101 CYP21A2P08686 494 aa31.83■■■□□ 2.69
LMO1-202ENST00000428101 EDNRBP24530 442 aa31.83■■■□□ 2.69
LMO1-202ENST00000428101 IFIT1BQ5T764 474 aaKnown RBP31.83■■■□□ 2.69
LMO1-202ENST00000428101 FAM109BQ6ICB4 259 aaPredicted RBP31.83■■■□□ 2.69
LMO1-202ENST00000428101 DNERQ8NFT8 737 aa31.83■■■□□ 2.69
LMO1-202ENST00000428101 WDR11Q9BZH6 1224 aa31.83■■■□□ 2.69
LMO1-202ENST00000428101 GRIN2DO15399 1336 aa31.82■■■□□ 2.68
LMO1-202ENST00000428101 FPGSQ05932 587 aa31.82■■■□□ 2.68
LMO1-202ENST00000428101 ZEB2O60315 1214 aa31.81■■■□□ 2.68
LMO1-202ENST00000428101 CD4P01730 458 aa31.81■■■□□ 2.68
LMO1-202ENST00000428101 QRICH1Q2TAL8 776 aa31.81■■■□□ 2.68
LMO1-202ENST00000428101 STAG2Q8N3U4 1231 aa31.81■■■□□ 2.68
LMO1-202ENST00000428101 TBC1D5Q92609 795 aa31.81■■■□□ 2.68
LMO1-202ENST00000428101 JMJD4Q9H9V9 463 aa31.81■■■□□ 2.68
LMO1-202ENST00000428101 ABCB11O95342 1321 aa31.8■■■□□ 2.68
LMO1-202ENST00000428101 SGSM2O43147 1006 aa31.8■■■□□ 2.68
LMO1-202ENST00000428101 PDE4DQ08499 809 aa31.8■■■□□ 2.68
LMO1-202ENST00000428101 ITGA7Q13683 1181 aa31.8■■■□□ 2.68
LMO1-202ENST00000428101 VAT1LQ9HCJ6 419 aa31.8■■■□□ 2.68
LMO1-202ENST00000428101 TAF6LQ9Y6J9 622 aa31.8■■■□□ 2.68
LMO1-202ENST00000428101 U3KPZ7 1027 aaPredicted RBP31.8■■■□□ 2.68
LMO1-202ENST00000428101 MFSD5Q6N075 450 aa31.79■■■□□ 2.68
LMO1-202ENST00000428101 MAF1Q9H063 256 aa31.79■■■□□ 2.68
LMO1-202ENST00000428101 TRDNQ13061 729 aa31.78■■■□□ 2.68
LMO1-202ENST00000428101 STXBP5LQ9Y2K9 1186 aa31.78■■■□□ 2.68
LMO1-202ENST00000428101 TLR3O15455 904 aaKnown RBP31.77■■■□□ 2.68
LMO1-202ENST00000428101 PSMC6P62333 389 aa31.77■■■□□ 2.68
LMO1-202ENST00000428101 FBXO11Q86XK2 927 aa31.77■■■□□ 2.68
LMO1-202ENST00000428101 SYTL5Q8TDW5 730 aaPredicted RBP31.77■■■□□ 2.68
LMO1-202ENST00000428101 RNPC3Q96LT9 517 aaKnown RBP31.77■■■□□ 2.68
LMO1-202ENST00000428101 MPHOSPH6Q99547 160 aaKnown RBP31.77■■■□□ 2.68
LMO1-202ENST00000428101 COL20A1Q9P218 1284 aa31.77■■■□□ 2.68
LMO1-202ENST00000428101 MAD2L2Q9UI95 211 aa31.77■■■□□ 2.68
LMO1-202ENST00000428101 DHX16O60231 1041 aaKnown RBP31.76■■■□□ 2.67
LMO1-202ENST00000428101 SMAD3P84022 425 aaKnown RBP31.76■■■□□ 2.67
LMO1-202ENST00000428101 PALM3A6NDB9 673 aaPredicted RBP31.75■■■□□ 2.67
LMO1-202ENST00000428101 STOX1Q6ZVD7 989 aa31.75■■■□□ 2.67
LMO1-202ENST00000428101 SCFD2Q8WU76 684 aa31.75■■■□□ 2.67
LMO1-202ENST00000428101 MTMR8Q96EF0 704 aa31.75■■■□□ 2.67
LMO1-202ENST00000428101 GUCD1Q96NT3 240 aa31.75■■■□□ 2.67
LMO1-202ENST00000428101 TAAR1Q96RJ0 339 aa31.75■■■□□ 2.67
LMO1-202ENST00000428101 SENP2Q9HC62 589 aa31.75■■■□□ 2.67
LMO1-202ENST00000428101 MRPL11Q9Y3B7 192 aaKnown RBP31.75■■■□□ 2.67
LMO1-202ENST00000428101 BAZ2BQ9UIF8 2168 aaKnown RBP31.74■■■□□ 2.67
LMO1-202ENST00000428101 KLRF2D3W0D1 207 aa31.74■■■□□ 2.67
LMO1-202ENST00000428101 E7EWF7 191 aa31.74■■■□□ 2.67
LMO1-202ENST00000428101 C16orf59Q7L2K0 433 aa31.74■■■□□ 2.67
LMO1-202ENST00000428101 MCF2L2Q86YR7 1114 aa31.74■■■□□ 2.67
LMO1-202ENST00000428101 OR6J1Q8NGC5 347 aa31.74■■■□□ 2.67
LMO1-202ENST00000428101 MAP4K1Q92918 833 aa31.74■■■□□ 2.67
LMO1-202ENST00000428101 FAM161BQ96MY7 647 aa31.74■■■□□ 2.67
LMO1-202ENST00000428101 SEZ6LQ9BYH1 1024 aa31.74■■■□□ 2.67
LMO1-202ENST00000428101 PPP1R12CQ9BZL4 782 aa31.74■■■□□ 2.67
LMO1-202ENST00000428101 B4DLN1 442 aa31.73■■■□□ 2.67
LMO1-202ENST00000428101 NKRFO15226 690 aaKnown RBP eCLIP31.73■■■□□ 2.67
LMO1-202ENST00000428101 MRPL12P52815 198 aaKnown RBP31.73■■■□□ 2.67
LMO1-202ENST00000428101 PURAQ00577 322 aaKnown RBP31.73■■■□□ 2.67
LMO1-202ENST00000428101 PPP2R5BQ15173 497 aa31.73■■■□□ 2.67
LMO1-202ENST00000428101 ZNF697Q5TEC3 545 aa31.73■■■□□ 2.67
LMO1-202ENST00000428101 COPS5Q92905 334 aa31.73■■■□□ 2.67
LMO1-202ENST00000428101 BUD13Q9BRD0 619 aaKnown RBP eCLIP31.73■■■□□ 2.67
LMO1-202ENST00000428101 IFIT3O14879 490 aaKnown RBP31.72■■■□□ 2.67
LMO1-202ENST00000428101 ARIH2O95376 493 aa31.72■■■□□ 2.67
LMO1-202ENST00000428101 CSF2RAP15509 400 aa31.72■■■□□ 2.67
LMO1-202ENST00000428101 CPT1AP50416 773 aa31.72■■■□□ 2.67
LMO1-202ENST00000428101 PPIGQ13427 754 aaKnown RBP eCLIP31.72■■■□□ 2.67
LMO1-202ENST00000428101 SLC35G1Q2M3R5 365 aa31.72■■■□□ 2.67
LMO1-202ENST00000428101 NCOA7Q8NI08 942 aa31.72■■■□□ 2.67
LMO1-202ENST00000428101 NSUN6Q8TEA1 469 aaKnown RBP31.72■■■□□ 2.67
LMO1-202ENST00000428101 TRPV6Q9H1D0 765 aa31.72■■■□□ 2.67
LMO1-202ENST00000428101 POLR3EQ9NVU0 708 aa31.72■■■□□ 2.67
LMO1-202ENST00000428101 CDH23Q9H251 3354 aa31.72■■■□□ 2.67
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms