RNA–Protein interactions for RNA: ENST00000427645.5

SMARCAL1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 3

Gene SMARCAL1, Length 977 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-206ENST00000427645 PPP1R18Q6NYC8 613 aa9.47□□□□□ -0.89
SMARCAL1-206ENST00000427645 HEATR3Q7Z4Q2 680 aa9.47□□□□□ -0.89
SMARCAL1-206ENST00000427645 HOMER1Q86YM7 354 aa9.47□□□□□ -0.89
SMARCAL1-206ENST00000427645 PROCA1Q8NCQ7 364 aaPredicted RBP9.47□□□□□ -0.89
SMARCAL1-206ENST00000427645 PXYLP1Q8TE99 480 aa9.47□□□□□ -0.89
SMARCAL1-206ENST00000427645 FOXD4L4Q8WXT5 416 aaPredicted RBP9.47□□□□□ -0.89
SMARCAL1-206ENST00000427645 COA7Q96BR5 231 aa9.47□□□□□ -0.89
SMARCAL1-206ENST00000427645 LRCH3Q96II8 777 aa9.47□□□□□ -0.89
SMARCAL1-206ENST00000427645 ZNF396Q96N95 335 aaPredicted RBP9.47□□□□□ -0.89
SMARCAL1-206ENST00000427645 AIFM3Q96NN9 605 aa9.47□□□□□ -0.89
SMARCAL1-206ENST00000427645 NUP88Q99567 741 aaPredicted RBP9.47□□□□□ -0.89
SMARCAL1-206ENST00000427645 AMNQ9BXJ7 453 aa9.47□□□□□ -0.89
SMARCAL1-206ENST00000427645 ASCC2Q9H1I8 757 aaPredicted RBP9.47□□□□□ -0.89
SMARCAL1-206ENST00000427645 HOXC10Q9NYD6 342 aa9.47□□□□□ -0.89
SMARCAL1-206ENST00000427645 PRR12Q9ULL5 1215 aa9.47□□□□□ -0.89
SMARCAL1-206ENST00000427645 SLC45A1Q9Y2W3 748 aa9.47□□□□□ -0.89
SMARCAL1-206ENST00000427645 TRIOBPQ9H2D6 2365 aa9.47□□□□□ -0.89
SMARCAL1-206ENST00000427645 CEP290O15078 2479 aa9.46□□□□□ -0.89
SMARCAL1-206ENST00000427645 hCG_1642624A0A1W2PR95 340 aa9.46□□□□□ -0.9
SMARCAL1-206ENST00000427645 SMCO2A6NFE2 343 aa9.46□□□□□ -0.9
SMARCAL1-206ENST00000427645 USP17L15C9J2P7 530 aa9.46□□□□□ -0.9
SMARCAL1-206ENST00000427645 USP17L13C9JLJ4 530 aa9.46□□□□□ -0.9
SMARCAL1-206ENST00000427645 USP17L11C9JVI0 530 aa9.46□□□□□ -0.9
SMARCAL1-206ENST00000427645 USP17L18D6R9N7 530 aa9.46□□□□□ -0.9
SMARCAL1-206ENST00000427645 USP17L22D6RA61 530 aa9.46□□□□□ -0.9
SMARCAL1-206ENST00000427645 USP17L17D6RBQ6 530 aa9.46□□□□□ -0.9
SMARCAL1-206ENST00000427645 USP17L19D6RCP7 530 aa9.46□□□□□ -0.9
SMARCAL1-206ENST00000427645 USP17L20D6RJB6 530 aa9.46□□□□□ -0.9
SMARCAL1-206ENST00000427645 ZBED4O75132 1171 aa9.46□□□□□ -0.9
SMARCAL1-206ENST00000427645 MRPL12P52815 198 aaKnown RBP9.46□□□□□ -0.9
SMARCAL1-206ENST00000427645 NAPAP54920 295 aa9.46□□□□□ -0.9
SMARCAL1-206ENST00000427645 KRT85P78386 507 aa9.46□□□□□ -0.9
SMARCAL1-206ENST00000427645 USP17L24Q0WX57 530 aa9.46□□□□□ -0.9
SMARCAL1-206ENST00000427645 RESTQ13127 1097 aa9.46□□□□□ -0.9
SMARCAL1-206ENST00000427645 PABPC4Q13310 644 aaKnown RBP eCLIP9.46□□□□□ -0.9
SMARCAL1-206ENST00000427645 IRF5Q13568 498 aa9.46□□□□□ -0.9
SMARCAL1-206ENST00000427645 COG2Q14746 738 aa9.46□□□□□ -0.9
SMARCAL1-206ENST00000427645 CDC37Q16543 378 aaPredicted RBP9.46□□□□□ -0.9
SMARCAL1-206ENST00000427645 KIAA1755Q5JYT7 1200 aa9.46□□□□□ -0.9
SMARCAL1-206ENST00000427645 FERMT3Q86UX7 667 aa9.46□□□□□ -0.9
SMARCAL1-206ENST00000427645 FBXO11Q86XK2 927 aa9.46□□□□□ -0.9
SMARCAL1-206ENST00000427645 DIS3L2Q8IYB7 885 aaKnown RBP9.46□□□□□ -0.9
SMARCAL1-206ENST00000427645 C7orf61Q8IZ16 206 aa9.46□□□□□ -0.9
SMARCAL1-206ENST00000427645 PIBF1Q8WXW3 757 aa9.46□□□□□ -0.9
SMARCAL1-206ENST00000427645 SLF1Q9BQI6 1058 aa9.46□□□□□ -0.9
SMARCAL1-206ENST00000427645 SCAND2PQ9GZW5 306 aaPredicted RBP9.46□□□□□ -0.9
SMARCAL1-206ENST00000427645 ZMYND12Q9H0C1 365 aa9.46□□□□□ -0.9
SMARCAL1-206ENST00000427645 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.46□□□□□ -0.9
SMARCAL1-206ENST00000427645 CPVLQ9H3G5 476 aa9.46□□□□□ -0.9
SMARCAL1-206ENST00000427645 PAK6Q9NQU5 681 aaPredicted RBP9.46□□□□□ -0.9
SMARCAL1-206ENST00000427645 VPS54Q9P1Q0 977 aa9.46□□□□□ -0.9
SMARCAL1-206ENST00000427645 GJD2Q9UKL4 321 aa9.46□□□□□ -0.9
SMARCAL1-206ENST00000427645 ZMYND8Q9ULU4 1186 aaPredicted RBP9.46□□□□□ -0.9
SMARCAL1-206ENST00000427645 PCDHA4Q9UN74 947 aa9.46□□□□□ -0.9
SMARCAL1-206ENST00000427645 CTDP1Q9Y5B0 961 aaPredicted RBP9.46□□□□□ -0.9
SMARCAL1-206ENST00000427645 PHIPQ8WWQ0 1821 aa9.46□□□□□ -0.9
SMARCAL1-206ENST00000427645 COL6A3P12111 3177 aa9.46□□□□□ -0.9
SMARCAL1-206ENST00000427645 DDX11L8A8MPP1 907 aa9.45□□□□□ -0.9
SMARCAL1-206ENST00000427645 BTBD18B2RXH4 712 aa9.45□□□□□ -0.9
SMARCAL1-206ENST00000427645 STXBP3O00186 592 aa9.45□□□□□ -0.9
SMARCAL1-206ENST00000427645 SYN1P17600 705 aa9.45□□□□□ -0.9
SMARCAL1-206ENST00000427645 VCAM1P19320 739 aa9.45□□□□□ -0.9
SMARCAL1-206ENST00000427645 CYP2B6P20813 491 aa9.45□□□□□ -0.9
SMARCAL1-206ENST00000427645 FOSBP53539 338 aa9.45□□□□□ -0.9
SMARCAL1-206ENST00000427645 FAM110CQ1W6H9 321 aa9.45□□□□□ -0.9
SMARCAL1-206ENST00000427645 SLC35G1Q2M3R5 365 aa9.45□□□□□ -0.9
SMARCAL1-206ENST00000427645 QRICH1Q2TAL8 776 aa9.45□□□□□ -0.9
SMARCAL1-206ENST00000427645 RILPL1Q5EBL4 403 aa9.45□□□□□ -0.9
SMARCAL1-206ENST00000427645 WWC2Q6AWC2 1192 aa9.45□□□□□ -0.9
SMARCAL1-206ENST00000427645 CATSPERGQ6ZRH7 1159 aa9.45□□□□□ -0.9
SMARCAL1-206ENST00000427645 RASGRP2Q7LDG7 609 aa9.45□□□□□ -0.9
SMARCAL1-206ENST00000427645 NOSTRINQ8IVI9 506 aa9.45□□□□□ -0.9
SMARCAL1-206ENST00000427645 BLIDQ8IZY5 108 aa9.45□□□□□ -0.9
SMARCAL1-206ENST00000427645 SAMD3Q8N6K7 520 aa9.45□□□□□ -0.9
SMARCAL1-206ENST00000427645 DAGLBQ8NCG7 672 aa9.45□□□□□ -0.9
SMARCAL1-206ENST00000427645 KIFC2Q96AC6 838 aa9.45□□□□□ -0.9
SMARCAL1-206ENST00000427645 RNF25Q96BH1 459 aaPredicted RBP9.45□□□□□ -0.9
SMARCAL1-206ENST00000427645 P2RX7Q99572 595 aaKnown RBP9.45□□□□□ -0.9
SMARCAL1-206ENST00000427645 TANGO6Q9C0B7 1094 aa9.45□□□□□ -0.9
SMARCAL1-206ENST00000427645 CRISPLD2Q9H0B8 497 aa9.45□□□□□ -0.9
SMARCAL1-206ENST00000427645 RANBP17Q9H2T7 1088 aaKnown RBP9.45□□□□□ -0.9
SMARCAL1-206ENST00000427645 RPAP3Q9H6T3 665 aaPredicted RBP9.45□□□□□ -0.9
SMARCAL1-206ENST00000427645 GJB4Q9NTQ9 266 aa9.45□□□□□ -0.9
SMARCAL1-206ENST00000427645 KCNJ14Q9UNX9 436 aa9.45□□□□□ -0.9
SMARCAL1-206ENST00000427645 PCDHA1Q9Y5I3 950 aa9.45□□□□□ -0.9
SMARCAL1-206ENST00000427645 BAZ2BQ9UIF8 2168 aaKnown RBP9.45□□□□□ -0.9
SMARCAL1-206ENST00000427645 FLOT1O75955 427 aa9.44□□□□□ -0.9
SMARCAL1-206ENST00000427645 CHRM1P11229 460 aaPredicted RBP9.44□□□□□ -0.9
SMARCAL1-206ENST00000427645 NCLP19338 710 aaKnown RBP9.44□□□□□ -0.9
SMARCAL1-206ENST00000427645 HOXA7P31268 230 aaPredicted RBP9.44□□□□□ -0.9
SMARCAL1-206ENST00000427645 MCM4P33991 863 aa9.44□□□□□ -0.9
SMARCAL1-206ENST00000427645 TRAPPC10P48553 1259 aa9.44□□□□□ -0.9
SMARCAL1-206ENST00000427645 OAZ1P54368 228 aa9.44□□□□□ -0.9
SMARCAL1-206ENST00000427645 NECAB2Q7Z6G3 386 aa9.44□□□□□ -0.9
SMARCAL1-206ENST00000427645 TRIB2Q92519 343 aa9.44□□□□□ -0.9
SMARCAL1-206ENST00000427645 GPKOWQ92917 476 aaPredicted RBP eCLIP9.44□□□□□ -0.9
SMARCAL1-206ENST00000427645 CUL5Q93034 780 aa9.44□□□□□ -0.9
SMARCAL1-206ENST00000427645 MAF1Q9H063 256 aa9.44□□□□□ -0.9
SMARCAL1-206ENST00000427645 PSTPIP2Q9H939 334 aa9.44□□□□□ -0.9
SMARCAL1-206ENST00000427645 TXNRD2Q9NNW7 524 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms