RNA–Protein interactions for RNA: ENST00000427566.2

CLK3P2-201, Transcript of CDC like kinase 3 pseudogene 2, humanhuman

BASIC

Gene CLK3P2, Length 1,453 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3P2-201ENST00000427566 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.19■□□□□ 0.5
CLK3P2-201ENST00000427566 CYP39A1Q9NYL5 469 aa18.19■□□□□ 0.5
CLK3P2-201ENST00000427566 SYNGAP1Q96PV0 1343 aa18.18■□□□□ 0.5
CLK3P2-201ENST00000427566 hCG_1642624A0A1W2PR95 340 aa18.18■□□□□ 0.5
CLK3P2-201ENST00000427566 SNAI1O95863 264 aaPredicted RBP18.18■□□□□ 0.5
CLK3P2-201ENST00000427566 ADD1P35611 737 aaKnown RBP18.18■□□□□ 0.5
CLK3P2-201ENST00000427566 RTN1Q16799 776 aa18.18■□□□□ 0.5
CLK3P2-201ENST00000427566 GJC2Q5T442 439 aaPredicted RBP18.18■□□□□ 0.5
CLK3P2-201ENST00000427566 ARMCX2Q7L311 632 aa18.18■□□□□ 0.5
CLK3P2-201ENST00000427566 ZNF467Q7Z7K2 595 aaPredicted RBP18.18■□□□□ 0.5
CLK3P2-201ENST00000427566 MSL3Q8N5Y2 521 aaKnown RBP18.18■□□□□ 0.5
CLK3P2-201ENST00000427566 FAM133AQ8N9E0 248 aa18.18■□□□□ 0.5
CLK3P2-201ENST00000427566 CLEC4DQ8WXI8 215 aa18.18■□□□□ 0.5
CLK3P2-201ENST00000427566 FGD4Q96M96 766 aa18.18■□□□□ 0.5
CLK3P2-201ENST00000427566 PURBQ96QR8 312 aaKnown RBP18.18■□□□□ 0.5
CLK3P2-201ENST00000427566 SPZ1Q9BXG8 430 aa18.18■□□□□ 0.5
CLK3P2-201ENST00000427566 LRRC37A2A6NM11 1700 aa18.17■□□□□ 0.5
CLK3P2-201ENST00000427566 SOWAHBA6NEL2 793 aa18.17■□□□□ 0.5
CLK3P2-201ENST00000427566 ZBTB5O15062 677 aa18.17■□□□□ 0.5
CLK3P2-201ENST00000427566 PDIA3P30101 505 aaKnown RBP18.17■□□□□ 0.5
CLK3P2-201ENST00000427566 RBM25P49756 843 aaKnown RBP18.17■□□□□ 0.5
CLK3P2-201ENST00000427566 METAP2P50579 478 aaKnown RBP eCLIP18.17■□□□□ 0.5
CLK3P2-201ENST00000427566 NEK4P51957 841 aa18.17■□□□□ 0.5
CLK3P2-201ENST00000427566 EVCP57679 992 aa18.17■□□□□ 0.5
CLK3P2-201ENST00000427566 CCT2P78371 535 aaKnown RBP18.17■□□□□ 0.5
CLK3P2-201ENST00000427566 PRPF38BQ5VTL8 546 aaKnown RBP18.17■□□□□ 0.5
CLK3P2-201ENST00000427566 MAMDC4Q6UXC1 1216 aa18.17■□□□□ 0.5
CLK3P2-201ENST00000427566 RNF207Q6ZRF8 634 aa18.17■□□□□ 0.5
CLK3P2-201ENST00000427566 FBXO11Q86XK2 927 aa18.17■□□□□ 0.5
CLK3P2-201ENST00000427566 NRBP1Q9UHY1 535 aa18.17■□□□□ 0.5
CLK3P2-201ENST00000427566 DDX49Q9Y6V7 483 aaKnown RBP18.17■□□□□ 0.5
CLK3P2-201ENST00000427566 PPFIA3O75145 1194 aa18.16■□□□□ 0.5
CLK3P2-201ENST00000427566 ZNF865P0CJ78 1059 aaPredicted RBP18.16■□□□□ 0.5
CLK3P2-201ENST00000427566 RARBP10826 455 aa18.16■□□□□ 0.5
CLK3P2-201ENST00000427566 AKR1A1P14550 325 aa18.16■□□□□ 0.5
CLK3P2-201ENST00000427566 MNX1P50219 401 aaPredicted RBP18.16■□□□□ 0.5
CLK3P2-201ENST00000427566 AK2P54819 239 aa18.16■□□□□ 0.5
CLK3P2-201ENST00000427566 FUT2Q10981 343 aa18.16■□□□□ 0.5
CLK3P2-201ENST00000427566 ACVR2BQ13705 512 aa18.16■□□□□ 0.5
CLK3P2-201ENST00000427566 SLC30A10Q6XR72 485 aa18.16■□□□□ 0.5
CLK3P2-201ENST00000427566 NOL8Q76FK4 1167 aaKnown RBP18.16■□□□□ 0.5
CLK3P2-201ENST00000427566 TBC1D5Q92609 795 aa18.16■□□□□ 0.5
CLK3P2-201ENST00000427566 LENG1Q96BZ8 264 aaPredicted RBP18.16■□□□□ 0.5
CLK3P2-201ENST00000427566 NCOA5Q9HCD5 579 aaKnown RBP18.16■□□□□ 0.5
CLK3P2-201ENST00000427566 ASB14A6NK59 587 aa18.15■□□□□ 0.5
CLK3P2-201ENST00000427566 EVI5O60447 810 aa18.15■□□□□ 0.5
CLK3P2-201ENST00000427566 GNAQP50148 359 aa18.15■□□□□ 0.5
CLK3P2-201ENST00000427566 STK3Q13188 491 aa18.15■□□□□ 0.5
CLK3P2-201ENST00000427566 EEPD1Q7L9B9 569 aa18.15■□□□□ 0.5
CLK3P2-201ENST00000427566 ARRDC4Q8NCT1 418 aa18.15■□□□□ 0.5
CLK3P2-201ENST00000427566 LZTS2Q9BRK4 669 aa18.15■□□□□ 0.5
CLK3P2-201ENST00000427566 SENP6Q9GZR1 1112 aaPredicted RBP18.15■□□□□ 0.5
CLK3P2-201ENST00000427566 ABHD16BQ9H3Z7 469 aa18.15■□□□□ 0.5
CLK3P2-201ENST00000427566 XPNPEP3Q9NQH7 507 aa18.15■□□□□ 0.5
CLK3P2-201ENST00000427566 RBM28Q9NW13 759 aaKnown RBP18.15■□□□□ 0.5
CLK3P2-201ENST00000427566 FAM184BQ9ULE4 1060 aa18.15■□□□□ 0.5
CLK3P2-201ENST00000427566 TPCN1Q9ULQ1 816 aa18.15■□□□□ 0.5
CLK3P2-201ENST00000427566 ABCB11O95342 1321 aa18.15■□□□□ 0.5
CLK3P2-201ENST00000427566 CNTNAP5Q8WYK1 1306 aa18.15■□□□□ 0.5
CLK3P2-201ENST00000427566 PNMA6FA0A0J9YX94 578 aa18.14■□□□□ 0.5
CLK3P2-201ENST00000427566 KBTBD13C9JR72 458 aa18.14■□□□□ 0.5
CLK3P2-201ENST00000427566 OPLAHO14841 1288 aa18.14■□□□□ 0.5
CLK3P2-201ENST00000427566 SMARCA1P28370 1054 aa18.14■□□□□ 0.5
CLK3P2-201ENST00000427566 RCAN1P53805 252 aa18.14■□□□□ 0.5
CLK3P2-201ENST00000427566 AMNQ9BXJ7 453 aa18.14■□□□□ 0.5
CLK3P2-201ENST00000427566 ALDH8A1Q9H2A2 487 aaPredicted RBP18.14■□□□□ 0.5
CLK3P2-201ENST00000427566 ADD3Q9UEY8 706 aaKnown RBP18.14■□□□□ 0.5
CLK3P2-201ENST00000427566 MKI67P46013 3256 aaKnown RBP18.14■□□□□ 0.49
CLK3P2-201ENST00000427566 NID2Q14112 1375 aa18.14■□□□□ 0.49
CLK3P2-201ENST00000427566 DTNBO60941 627 aa18.14■□□□□ 0.49
CLK3P2-201ENST00000427566 PGK1P00558 417 aa18.14■□□□□ 0.49
CLK3P2-201ENST00000427566 RPS6P62753 249 aaKnown RBP18.14■□□□□ 0.49
CLK3P2-201ENST00000427566 RRP36Q96EU6 259 aaKnown RBP18.14■□□□□ 0.49
CLK3P2-201ENST00000427566 UPF2Q9HAU5 1272 aaKnown RBP18.14■□□□□ 0.49
CLK3P2-201ENST00000427566 MRPL11Q9Y3B7 192 aaKnown RBP18.14■□□□□ 0.49
CLK3P2-201ENST00000427566 PCDHA1Q9Y5I3 950 aa18.14■□□□□ 0.49
CLK3P2-201ENST00000427566 ASTN1O14525 1302 aa18.13■□□□□ 0.49
CLK3P2-201ENST00000427566 DNM1LO00429 736 aa18.13■□□□□ 0.49
CLK3P2-201ENST00000427566 LARGE1O95461 756 aa18.13■□□□□ 0.49
CLK3P2-201ENST00000427566 ALDH5A1P51649 535 aaPredicted RBP18.13■□□□□ 0.49
CLK3P2-201ENST00000427566 NTRK3Q16288 839 aa18.13■□□□□ 0.49
CLK3P2-201ENST00000427566 CCDC144BQ3MJ40 725 aa18.13■□□□□ 0.49
CLK3P2-201ENST00000427566 C7orf61Q8IZ16 206 aa18.13■□□□□ 0.49
CLK3P2-201ENST00000427566 ZNF274Q96GC6 653 aaPredicted RBP18.13■□□□□ 0.49
CLK3P2-201ENST00000427566 TBC1D32Q96NH3 1257 aa18.13■□□□□ 0.49
CLK3P2-201ENST00000427566 NR2E3Q9Y5X4 410 aa18.13■□□□□ 0.49
CLK3P2-201ENST00000427566 H0YGN5 161 aa18.12■□□□□ 0.49
CLK3P2-201ENST00000427566 ATN1P54259 1190 aaPredicted RBP18.12■□□□□ 0.49
CLK3P2-201ENST00000427566 LRRC41Q15345 812 aa18.12■□□□□ 0.49
CLK3P2-201ENST00000427566 FBXO16Q8IX29 292 aaPredicted RBP18.12■□□□□ 0.49
CLK3P2-201ENST00000427566 PHKBQ93100 1093 aa18.12■□□□□ 0.49
CLK3P2-201ENST00000427566 FERMT2Q96AC1 680 aa18.12■□□□□ 0.49
CLK3P2-201ENST00000427566 V9GY48 417 aaPredicted RBP18.12■□□□□ 0.49
CLK3P2-201ENST00000427566 CFBP00751 764 aa18.11■□□□□ 0.49
CLK3P2-201ENST00000427566 RNF180Q86T96 592 aa18.11■□□□□ 0.49
CLK3P2-201ENST00000427566 MCF2L2Q86YR7 1114 aa18.11■□□□□ 0.49
CLK3P2-201ENST00000427566 GPKOWQ92917 476 aaPredicted RBP eCLIP18.11■□□□□ 0.49
CLK3P2-201ENST00000427566 MPHOSPH6Q99547 160 aaKnown RBP18.11■□□□□ 0.49
CLK3P2-201ENST00000427566 SEC63Q9UGP8 760 aaKnown RBP18.11■□□□□ 0.49
CLK3P2-201ENST00000427566 KIAA1217Q5T5P2 1943 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms