RNA–Protein interactions for RNA: ENST00000427478.6

CNEP1R1-202, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNEP1R1, Length 2,117 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-202ENST00000427478 PPP4R3AQ6IN85 833 aa24.53■■□□□ 1.52
CNEP1R1-202ENST00000427478 FBXO11Q86XK2 927 aa24.53■■□□□ 1.52
CNEP1R1-202ENST00000427478 SPTLC3Q9NUV7 552 aa24.53■■□□□ 1.52
CNEP1R1-202ENST00000427478 DDX25Q9UHL0 483 aaKnown RBP24.53■■□□□ 1.52
CNEP1R1-202ENST00000427478 TMX2Q9Y320 296 aa24.53■■□□□ 1.52
CNEP1R1-202ENST00000427478 BTNL9Q6UXG8 535 aa24.53■■□□□ 1.52
CNEP1R1-202ENST00000427478 NAP1L5Q96NT1 182 aaPredicted RBP24.53■■□□□ 1.52
CNEP1R1-202ENST00000427478 SAMSN1Q9NSI8 373 aaKnown RBP24.53■■□□□ 1.52
CNEP1R1-202ENST00000427478 RMND1Q9NWS8 449 aa24.53■■□□□ 1.52
CNEP1R1-202ENST00000427478 PGAP2Q9UHJ9 254 aa24.53■■□□□ 1.52
CNEP1R1-202ENST00000427478 TAL1P17542 331 aaPredicted RBP24.52■■□□□ 1.52
CNEP1R1-202ENST00000427478 FXR2P51116 673 aaKnown RBP eCLIP24.52■■□□□ 1.52
CNEP1R1-202ENST00000427478 GSDMDP57764 484 aa24.52■■□□□ 1.52
CNEP1R1-202ENST00000427478 RASSF7Q02833 373 aa24.52■■□□□ 1.52
CNEP1R1-202ENST00000427478 TMEM266Q2M3C6 531 aa24.52■■□□□ 1.52
CNEP1R1-202ENST00000427478 MMTAG2Q9BU76 263 aaKnown RBP24.52■■□□□ 1.52
CNEP1R1-202ENST00000427478 GOPCQ9HD26 462 aa24.52■■□□□ 1.52
CNEP1R1-202ENST00000427478 KBTBD4Q9NVX7 518 aa24.52■■□□□ 1.52
CNEP1R1-202ENST00000427478 CTNND2Q9UQB3 1225 aa24.52■■□□□ 1.52
CNEP1R1-202ENST00000427478 EGFRP00533 1210 aa24.52■■□□□ 1.52
CNEP1R1-202ENST00000427478 CDK11BP21127 795 aaKnown RBP24.52■■□□□ 1.52
CNEP1R1-202ENST00000427478 SGIP1Q9BQI5 828 aa24.52■■□□□ 1.52
CNEP1R1-202ENST00000427478 PRR12Q9ULL5 1215 aa24.52■■□□□ 1.52
CNEP1R1-202ENST00000427478 FAM83BQ5T0W9 1011 aa24.51■■□□□ 1.51
CNEP1R1-202ENST00000427478 ZNF658Q5TYW1 1059 aaPredicted RBP24.51■■□□□ 1.51
CNEP1R1-202ENST00000427478 ANO3Q9BYT9 981 aa24.51■■□□□ 1.51
CNEP1R1-202ENST00000427478 CUEDC2Q9H467 287 aa24.51■■□□□ 1.51
CNEP1R1-202ENST00000427478 LRWD1Q9UFC0 647 aa24.51■■□□□ 1.51
CNEP1R1-202ENST00000427478 CD2APQ9Y5K6 639 aa24.51■■□□□ 1.51
CNEP1R1-202ENST00000427478 CAP2P40123 477 aa24.5■■□□□ 1.51
CNEP1R1-202ENST00000427478 STAT2P52630 851 aa24.5■■□□□ 1.51
CNEP1R1-202ENST00000427478 ZYXQ15942 572 aaKnown RBP24.5■■□□□ 1.51
CNEP1R1-202ENST00000427478 SPATA1Q5VX52 437 aa24.5■■□□□ 1.51
CNEP1R1-202ENST00000427478 CALML4Q96GE6 196 aa24.5■■□□□ 1.51
CNEP1R1-202ENST00000427478 POTEMA6NI47 508 aa24.5■■□□□ 1.51
CNEP1R1-202ENST00000427478 MEIS2O14770 477 aa24.5■■□□□ 1.51
CNEP1R1-202ENST00000427478 DNTTIP2Q5QJE6 756 aaKnown RBP24.5■■□□□ 1.51
CNEP1R1-202ENST00000427478 MAGEF1Q9HAY2 307 aa24.5■■□□□ 1.51
CNEP1R1-202ENST00000427478 GCFC2P16383 781 aaKnown RBP24.49■■□□□ 1.51
CNEP1R1-202ENST00000427478 ZNF280AP59817 542 aaPredicted RBP24.49■■□□□ 1.51
CNEP1R1-202ENST00000427478 RASA3Q14644 834 aa24.49■■□□□ 1.51
CNEP1R1-202ENST00000427478 PTPN21Q16825 1174 aa24.49■■□□□ 1.51
CNEP1R1-202ENST00000427478 RAB34Q9BZG1 259 aa24.49■■□□□ 1.51
CNEP1R1-202ENST00000427478 INTS13Q9NVM9 706 aa24.49■■□□□ 1.51
CNEP1R1-202ENST00000427478 GDAQ9Y2T3 454 aa24.49■■□□□ 1.51
CNEP1R1-202ENST00000427478 MYL1P05976 194 aa24.49■■□□□ 1.51
CNEP1R1-202ENST00000427478 SMCHD1A6NHR9 2005 aa24.48■■□□□ 1.51
CNEP1R1-202ENST00000427478 RPS12P25398 132 aaKnown RBP24.48■■□□□ 1.51
CNEP1R1-202ENST00000427478 CCZ1BP86790 482 aa24.48■■□□□ 1.51
CNEP1R1-202ENST00000427478 CCZ1P86791 482 aaPredicted RBP24.48■■□□□ 1.51
CNEP1R1-202ENST00000427478 AP3B2Q13367 1082 aa24.48■■□□□ 1.51
CNEP1R1-202ENST00000427478 KMT5BQ4FZB7 885 aa24.48■■□□□ 1.51
CNEP1R1-202ENST00000427478 CCDC84Q86UT8 332 aaPredicted RBP24.48■■□□□ 1.51
CNEP1R1-202ENST00000427478 GJA10Q969M2 543 aa24.48■■□□□ 1.51
CNEP1R1-202ENST00000427478 KLRC4O43908 158 aa24.47■■□□□ 1.51
CNEP1R1-202ENST00000427478 MARCH6O60337 910 aa24.47■■□□□ 1.51
CNEP1R1-202ENST00000427478 COBLO75128 1261 aa24.47■■□□□ 1.51
CNEP1R1-202ENST00000427478 GMPSP49915 693 aaPredicted RBP24.47■■□□□ 1.51
CNEP1R1-202ENST00000427478 PRELPP51888 382 aa24.47■■□□□ 1.51
CNEP1R1-202ENST00000427478 ARMCX5Q6P1M9 558 aa24.47■■□□□ 1.51
CNEP1R1-202ENST00000427478 VSTM4Q8IW00 320 aa24.47■■□□□ 1.51
CNEP1R1-202ENST00000427478 HAS1Q92839 578 aa24.47■■□□□ 1.51
CNEP1R1-202ENST00000427478 P2RX7Q99572 595 aaKnown RBP24.47■■□□□ 1.51
CNEP1R1-202ENST00000427478 NAP1L4Q99733 375 aaKnown RBP24.47■■□□□ 1.51
CNEP1R1-202ENST00000427478 GLIS2Q9BZE0 524 aaPredicted RBP24.47■■□□□ 1.51
CNEP1R1-202ENST00000427478 VCPKMTQ9H867 229 aa24.47■■□□□ 1.51
CNEP1R1-202ENST00000427478 GJA3Q9Y6H8 435 aa24.47■■□□□ 1.51
CNEP1R1-202ENST00000427478 PSDA5PKW4 1024 aaPredicted RBP24.47■■□□□ 1.51
CNEP1R1-202ENST00000427478 SKILP12757 684 aa24.47■■□□□ 1.51
CNEP1R1-202ENST00000427478 GRB10Q13322 594 aa24.47■■□□□ 1.51
CNEP1R1-202ENST00000427478 MICALL2Q8IY33 904 aa24.47■■□□□ 1.51
CNEP1R1-202ENST00000427478 CCDC150Q8NCX0 1101 aa24.47■■□□□ 1.51
CNEP1R1-202ENST00000427478 MAPK8IP1Q9UQF2 711 aa24.47■■□□□ 1.51
CNEP1R1-202ENST00000427478 R3HCC1Q9Y3T6 440 aaKnown RBP24.47■■□□□ 1.51
CNEP1R1-202ENST00000427478 LTBP3Q9NS15 1303 aa24.46■■□□□ 1.51
CNEP1R1-202ENST00000427478 PDIA5Q14554 519 aa24.46■■□□□ 1.51
CNEP1R1-202ENST00000427478 KCNB1Q14721 858 aa24.46■■□□□ 1.51
CNEP1R1-202ENST00000427478 CDK5RAP3Q96JB5 506 aa24.46■■□□□ 1.51
CNEP1R1-202ENST00000427478 SH2D4AQ9H788 454 aa24.46■■□□□ 1.51
CNEP1R1-202ENST00000427478 USP11P51784 963 aa24.46■■□□□ 1.51
CNEP1R1-202ENST00000427478 MAP3K10Q02779 954 aa24.46■■□□□ 1.51
CNEP1R1-202ENST00000427478 PAK1Q13153 545 aa24.46■■□□□ 1.51
CNEP1R1-202ENST00000427478 DHX8Q14562 1220 aaKnown RBP24.46■■□□□ 1.51
CNEP1R1-202ENST00000427478 SAMD7Q7Z3H4 446 aa24.46■■□□□ 1.51
CNEP1R1-202ENST00000427478 SNX29Q8TEQ0 813 aa24.46■■□□□ 1.51
CNEP1R1-202ENST00000427478 PNMA5Q96PV4 448 aa24.46■■□□□ 1.51
CNEP1R1-202ENST00000427478 RWDD2AQ9UIY3 292 aa24.46■■□□□ 1.51
CNEP1R1-202ENST00000427478 ASTN2O75129 1339 aaPredicted RBP24.45■■□□□ 1.5
CNEP1R1-202ENST00000427478 OPLAHO14841 1288 aa24.45■■□□□ 1.5
CNEP1R1-202ENST00000427478 ASNSP08243 561 aa24.45■■□□□ 1.5
CNEP1R1-202ENST00000427478 PRCPP42785 496 aa24.45■■□□□ 1.5
CNEP1R1-202ENST00000427478 TNFAIP1Q13829 316 aa24.45■■□□□ 1.5
CNEP1R1-202ENST00000427478 TPD52L1Q16890 204 aaPredicted RBP24.45■■□□□ 1.5
CNEP1R1-202ENST00000427478 NELFBQ8WX92 580 aa24.45■■□□□ 1.5
CNEP1R1-202ENST00000427478 KIFC2Q96AC6 838 aa24.45■■□□□ 1.5
CNEP1R1-202ENST00000427478 UIMC1Q96RL1 719 aa24.45■■□□□ 1.5
CNEP1R1-202ENST00000427478 TRIM9Q9C026 710 aa24.45■■□□□ 1.5
CNEP1R1-202ENST00000427478 SFPQP23246 707 aaKnown RBP eCLIP24.44■■□□□ 1.5
CNEP1R1-202ENST00000427478 PTGER2P43116 358 aa24.44■■□□□ 1.5
CNEP1R1-202ENST00000427478 TBC1D10BQ4KMP7 808 aaPredicted RBP24.44■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms