RNA–Protein interactions for RNA: ENST00000427239.5

COL11A1-204, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 5

Gene COL11A1, Length 1,709 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-204ENST00000427239 NSMFQ6X4W1 530 aa17.69■□□□□ 0.42
COL11A1-204ENST00000427239 RNF207Q6ZRF8 634 aa17.69■□□□□ 0.42
COL11A1-204ENST00000427239 GPR142Q7Z601 462 aa17.69■□□□□ 0.42
COL11A1-204ENST00000427239 PLEKHH3Q7Z736 793 aa17.69■□□□□ 0.42
COL11A1-204ENST00000427239 DAGLBQ8NCG7 672 aa17.69■□□□□ 0.42
COL11A1-204ENST00000427239 SHISA4Q96DD7 197 aa17.69■□□□□ 0.42
COL11A1-204ENST00000427239 MEIS2O14770 477 aa17.68■□□□□ 0.42
COL11A1-204ENST00000427239 ARHGEF6Q15052 776 aa17.68■□□□□ 0.42
COL11A1-204ENST00000427239 BLIDQ8IZY5 108 aa17.68■□□□□ 0.42
COL11A1-204ENST00000427239 MMP19Q99542 508 aa17.68■□□□□ 0.42
COL11A1-204ENST00000427239 A1CFQ9NQ94 594 aaKnown RBP17.68■□□□□ 0.42
COL11A1-204ENST00000427239 CYP39A1Q9NYL5 469 aa17.68■□□□□ 0.42
COL11A1-204ENST00000427239 FOSP01100 380 aaPredicted RBP17.67■□□□□ 0.42
COL11A1-204ENST00000427239 PTPREP23469 700 aa17.67■□□□□ 0.42
COL11A1-204ENST00000427239 FCGRTP55899 365 aa17.67■□□□□ 0.42
COL11A1-204ENST00000427239 RPS6P62753 249 aaKnown RBP17.67■□□□□ 0.42
COL11A1-204ENST00000427239 REXO1Q8N1G1 1221 aaKnown RBP17.67■□□□□ 0.42
COL11A1-204ENST00000427239 TBC1D5Q92609 795 aa17.67■□□□□ 0.42
COL11A1-204ENST00000427239 SLC15A5A6NIM6 579 aa17.67■□□□□ 0.42
COL11A1-204ENST00000427239 TNPO2O14787 897 aaKnown RBP17.67■□□□□ 0.42
COL11A1-204ENST00000427239 STX6O43752 255 aa17.67■□□□□ 0.42
COL11A1-204ENST00000427239 FKTNO75072 461 aa17.67■□□□□ 0.42
COL11A1-204ENST00000427239 PSMC4P43686 418 aa17.67■□□□□ 0.42
COL11A1-204ENST00000427239 BAATQ14032 418 aaPredicted RBP17.67■□□□□ 0.42
COL11A1-204ENST00000427239 NPY5RQ15761 445 aa17.67■□□□□ 0.42
COL11A1-204ENST00000427239 USP17L6PQ6QN14 398 aa17.67■□□□□ 0.42
COL11A1-204ENST00000427239 GNRH1P01148 92 aa17.66■□□□□ 0.42
COL11A1-204ENST00000427239 KRT2P35908 639 aa17.66■□□□□ 0.42
COL11A1-204ENST00000427239 CLK2P49760 499 aaKnown RBP17.66■□□□□ 0.42
COL11A1-204ENST00000427239 FOSBP53539 338 aa17.66■□□□□ 0.42
COL11A1-204ENST00000427239 GUCY1B3Q02153 619 aa17.66■□□□□ 0.42
COL11A1-204ENST00000427239 ERO1AQ96HE7 468 aa17.66■□□□□ 0.42
COL11A1-204ENST00000427239 FOXP1Q9H334 677 aaPredicted RBP17.66■□□□□ 0.42
COL11A1-204ENST00000427239 SMCHD1A6NHR9 2005 aa17.65■□□□□ 0.42
COL11A1-204ENST00000427239 HOXA13P31271 388 aaPredicted RBP17.65■□□□□ 0.42
COL11A1-204ENST00000427239 AP3B2Q13367 1082 aa17.65■□□□□ 0.42
COL11A1-204ENST00000427239 GRB14Q14449 540 aa17.65■□□□□ 0.42
COL11A1-204ENST00000427239 DIS3L2Q8IYB7 885 aaKnown RBP17.65■□□□□ 0.42
COL11A1-204ENST00000427239 ZNF296Q8WUU4 475 aaPredicted RBP17.65■□□□□ 0.42
COL11A1-204ENST00000427239 SLC5A4Q9NY91 659 aa17.65■□□□□ 0.42
COL11A1-204ENST00000427239 BIN2Q9UBW5 565 aaPredicted RBP17.65■□□□□ 0.42
COL11A1-204ENST00000427239 DNAJC25-GNG10A0A024R161 153 aa17.64■□□□□ 0.41
COL11A1-204ENST00000427239 VPS37CA5D8V6 355 aaPredicted RBP17.64■□□□□ 0.41
COL11A1-204ENST00000427239 SPDYE3A6NKU9 549 aa17.64■□□□□ 0.41
COL11A1-204ENST00000427239 BTBD18B2RXH4 712 aa17.64■□□□□ 0.41
COL11A1-204ENST00000427239 POTEB2H3BUK9 544 aa17.64■□□□□ 0.41
COL11A1-204ENST00000427239 M0R2N6 131 aa17.64■□□□□ 0.41
COL11A1-204ENST00000427239 HOXD10P28358 340 aa17.64■□□□□ 0.41
COL11A1-204ENST00000427239 ADORA2AP29274 412 aa17.64■□□□□ 0.41
COL11A1-204ENST00000427239 GNL2Q13823 731 aaKnown RBP17.64■□□□□ 0.41
COL11A1-204ENST00000427239 MORN1Q5T089 497 aa17.64■□□□□ 0.41
COL11A1-204ENST00000427239 DNERQ8NFT8 737 aa17.64■□□□□ 0.41
COL11A1-204ENST00000427239 SYTL5Q8TDW5 730 aaPredicted RBP17.64■□□□□ 0.41
COL11A1-204ENST00000427239 TRIM47Q96LD4 638 aa17.64■□□□□ 0.41
COL11A1-204ENST00000427239 NUDT12Q9BQG2 462 aa17.64■□□□□ 0.41
COL11A1-204ENST00000427239 PCDHA6Q9UN73 950 aa17.64■□□□□ 0.41
COL11A1-204ENST00000427239 PCDHA8Q9Y5H6 950 aa17.64■□□□□ 0.41
COL11A1-204ENST00000427239 U2AF2P26368 475 aaKnown RBP eCLIP17.64■□□□□ 0.41
COL11A1-204ENST00000427239 UBE2SQ16763 222 aa17.64■□□□□ 0.41
COL11A1-204ENST00000427239 DPP9Q86TI2 863 aa17.64■□□□□ 0.41
COL11A1-204ENST00000427239 SOCS4Q8WXH5 440 aa17.64■□□□□ 0.41
COL11A1-204ENST00000427239 ADD3Q9UEY8 706 aaKnown RBP17.64■□□□□ 0.41
COL11A1-204ENST00000427239 DIS3Q9Y2L1 958 aaKnown RBP17.64■□□□□ 0.41
COL11A1-204ENST00000427239 DDIT3P35638 169 aa17.63■□□□□ 0.41
COL11A1-204ENST00000427239 MCTP1Q6DN14 999 aa17.63■□□□□ 0.41
COL11A1-204ENST00000427239 SLC30A10Q6XR72 485 aa17.63■□□□□ 0.41
COL11A1-204ENST00000427239 KRT25Q7Z3Z0 450 aa17.63■□□□□ 0.41
COL11A1-204ENST00000427239 FCHSD1Q86WN1 690 aa17.63■□□□□ 0.41
COL11A1-204ENST00000427239 FAM133AQ8N9E0 248 aa17.63■□□□□ 0.41
COL11A1-204ENST00000427239 OXER1Q8TDS5 423 aa17.63■□□□□ 0.41
COL11A1-204ENST00000427239 NSUN6Q8TEA1 469 aaKnown RBP17.63■□□□□ 0.41
COL11A1-204ENST00000427239 EHMT1Q9H9B1 1298 aa17.63■□□□□ 0.41
COL11A1-204ENST00000427239 TSKSQ9UJT2 592 aa17.63■□□□□ 0.41
COL11A1-204ENST00000427239 GJD2Q9UKL4 321 aa17.63■□□□□ 0.41
COL11A1-204ENST00000427239 LOC102724159A0A0B4J2E5 919 aa17.62■□□□□ 0.41
COL11A1-204ENST00000427239 PGK2P07205 417 aa17.62■□□□□ 0.41
COL11A1-204ENST00000427239 CTGFP29279 349 aa17.62■□□□□ 0.41
COL11A1-204ENST00000427239 NR5A1Q13285 461 aa17.62■□□□□ 0.41
COL11A1-204ENST00000427239 PWP2Q15269 919 aaKnown RBP17.62■□□□□ 0.41
COL11A1-204ENST00000427239 JAKMIP3Q5VZ66 844 aa17.62■□□□□ 0.41
COL11A1-204ENST00000427239 NOSTRINQ8IVI9 506 aa17.62■□□□□ 0.41
COL11A1-204ENST00000427239 USP6NLQ92738 828 aa17.62■□□□□ 0.41
COL11A1-204ENST00000427239 RMDN3Q96TC7 470 aa17.62■□□□□ 0.41
COL11A1-204ENST00000427239 ARHGAP39Q9C0H5 1083 aa17.62■□□□□ 0.41
COL11A1-204ENST00000427239 MTMR6Q9Y217 621 aa17.62■□□□□ 0.41
COL11A1-204ENST00000427239 CCDC194A0A1B0GVG4 234 aa17.61■□□□□ 0.41
COL11A1-204ENST00000427239 B4DLN1 442 aa17.61■□□□□ 0.41
COL11A1-204ENST00000427239 ADAMTS3O15072 1205 aa17.61■□□□□ 0.41
COL11A1-204ENST00000427239 HOXC6P09630 235 aa17.61■□□□□ 0.41
COL11A1-204ENST00000427239 NUCB2P80303 420 aa17.61■□□□□ 0.41
COL11A1-204ENST00000427239 CNTN2Q02246 1040 aa17.61■□□□□ 0.41
COL11A1-204ENST00000427239 MAP2K5Q13163 448 aa17.61■□□□□ 0.41
COL11A1-204ENST00000427239 ZNF792Q3KQV3 632 aa17.61■□□□□ 0.41
COL11A1-204ENST00000427239 CD99L2Q8TCZ2 262 aa17.61■□□□□ 0.41
COL11A1-204ENST00000427239 TNFRSF25Q93038 417 aa17.61■□□□□ 0.41
COL11A1-204ENST00000427239 TAAR1Q96RJ0 339 aa17.61■□□□□ 0.41
COL11A1-204ENST00000427239 IWS1Q96ST2 819 aa17.61■□□□□ 0.41
COL11A1-204ENST00000427239 MPHOSPH6Q99547 160 aaKnown RBP17.61■□□□□ 0.41
COL11A1-204ENST00000427239 ZSCAN16Q9H4T2 348 aaPredicted RBP17.61■□□□□ 0.41
COL11A1-204ENST00000427239 TMEM260Q9NX78 707 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms