RNA–Protein interactions for RNA: ENST00000426678.1

NCKIPSD-205, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 5

Gene NCKIPSD, Length 897 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-205ENST00000426678 MORC4Q8TE76 937 aa16.89■□□□□ 0.29
NCKIPSD-205ENST00000426678 MTMR8Q96EF0 704 aa16.89■□□□□ 0.29
NCKIPSD-205ENST00000426678 MAP3K14Q99558 947 aa16.89■□□□□ 0.29
NCKIPSD-205ENST00000426678 MYL10Q9BUA6 226 aa16.89■□□□□ 0.29
NCKIPSD-205ENST00000426678 RIOX1Q9H6W3 641 aa16.89■□□□□ 0.29
NCKIPSD-205ENST00000426678 ADCY6O43306 1168 aa16.88■□□□□ 0.29
NCKIPSD-205ENST00000426678 REC8O95072 547 aa16.88■□□□□ 0.29
NCKIPSD-205ENST00000426678 LIFRP42702 1097 aa16.88■□□□□ 0.29
NCKIPSD-205ENST00000426678 RTP1P59025 263 aa16.88■□□□□ 0.29
NCKIPSD-205ENST00000426678 PIGSQ96S52 555 aa16.88■□□□□ 0.29
NCKIPSD-205ENST00000426678 TSEN34Q9BSV6 310 aaKnown RBP16.88■□□□□ 0.29
NCKIPSD-205ENST00000426678 LRRC2Q9BYS8 371 aa16.88■□□□□ 0.29
NCKIPSD-205ENST00000426678 COLQQ9Y215 455 aaPredicted RBP16.88■□□□□ 0.29
NCKIPSD-205ENST00000426678 PCDHA1Q9Y5I3 950 aa16.88■□□□□ 0.29
NCKIPSD-205ENST00000426678 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.87■□□□□ 0.29
NCKIPSD-205ENST00000426678 A0A1W2PQ45 241 aaPredicted RBP16.87■□□□□ 0.29
NCKIPSD-205ENST00000426678 A0A1W2PQY0 241 aa16.87■□□□□ 0.29
NCKIPSD-205ENST00000426678 MOXD2PA6NHM9 499 aa16.87■□□□□ 0.29
NCKIPSD-205ENST00000426678 CALM1P0DP23 149 aa16.87■□□□□ 0.29
NCKIPSD-205ENST00000426678 CALM2P0DP24 149 aa16.87■□□□□ 0.29
NCKIPSD-205ENST00000426678 CALM3P0DP25 149 aa16.87■□□□□ 0.29
NCKIPSD-205ENST00000426678 SYN1P17600 705 aa16.87■□□□□ 0.29
NCKIPSD-205ENST00000426678 CST5P28325 142 aaPredicted RBP16.87■□□□□ 0.29
NCKIPSD-205ENST00000426678 GJA9P57773 515 aa16.87■□□□□ 0.29
NCKIPSD-205ENST00000426678 TSGA10IPQ3SY00 556 aa16.87■□□□□ 0.29
NCKIPSD-205ENST00000426678 SLC39A5Q6ZMH5 540 aa16.87■□□□□ 0.29
NCKIPSD-205ENST00000426678 PCSK9Q8NBP7 692 aaKnown RBP16.87■□□□□ 0.29
NCKIPSD-205ENST00000426678 LZTS2Q9BRK4 669 aa16.87■□□□□ 0.29
NCKIPSD-205ENST00000426678 UPF3AQ9H1J1 476 aaKnown RBP16.87■□□□□ 0.29
NCKIPSD-205ENST00000426678 ATP11BQ9Y2G3 1177 aa16.87■□□□□ 0.29
NCKIPSD-205ENST00000426678 SLC12A7Q9Y666 1083 aa16.87■□□□□ 0.29
NCKIPSD-205ENST00000426678 BAZ2BQ9UIF8 2168 aaKnown RBP16.87■□□□□ 0.29
NCKIPSD-205ENST00000426678 PNMA6FA0A0J9YX94 578 aa16.86■□□□□ 0.29
NCKIPSD-205ENST00000426678 MYADML2A6NDP7 307 aa16.86■□□□□ 0.29
NCKIPSD-205ENST00000426678 CYTH3O43739 400 aa16.86■□□□□ 0.29
NCKIPSD-205ENST00000426678 PPP1R11O60927 126 aaPredicted RBP16.86■□□□□ 0.29
NCKIPSD-205ENST00000426678 CFBP00751 764 aa16.86■□□□□ 0.29
NCKIPSD-205ENST00000426678 GNAQP50148 359 aa16.86■□□□□ 0.29
NCKIPSD-205ENST00000426678 ACLYP53396 1101 aa16.86■□□□□ 0.29
NCKIPSD-205ENST00000426678 COL9A3Q14050 684 aaPredicted RBP16.86■□□□□ 0.29
NCKIPSD-205ENST00000426678 SLC35G1Q2M3R5 365 aa16.86■□□□□ 0.29
NCKIPSD-205ENST00000426678 HABP4Q5JVS0 413 aaKnown RBP16.86■□□□□ 0.29
NCKIPSD-205ENST00000426678 IQSEC1Q6DN90 963 aa16.86■□□□□ 0.29
NCKIPSD-205ENST00000426678 TAPT1Q6NXT6 567 aa16.86■□□□□ 0.29
NCKIPSD-205ENST00000426678 SYNE3Q6ZMZ3 975 aa16.86■□□□□ 0.29
NCKIPSD-205ENST00000426678 TLK2Q86UE8 772 aa16.86■□□□□ 0.29
NCKIPSD-205ENST00000426678 RASEFQ8IZ41 740 aa16.86■□□□□ 0.29
NCKIPSD-205ENST00000426678 KLHDC9Q8NEP7 349 aa16.86■□□□□ 0.29
NCKIPSD-205ENST00000426678 SYTL5Q8TDW5 730 aaPredicted RBP16.86■□□□□ 0.29
NCKIPSD-205ENST00000426678 TBC1D5Q92609 795 aa16.86■□□□□ 0.29
NCKIPSD-205ENST00000426678 SPZ1Q9BXG8 430 aa16.86■□□□□ 0.29
NCKIPSD-205ENST00000426678 AP5M1Q9H0R1 490 aa16.86■□□□□ 0.29
NCKIPSD-205ENST00000426678 PDGFCQ9NRA1 345 aa16.86■□□□□ 0.29
NCKIPSD-205ENST00000426678 PRKAG2Q9UGJ0 569 aa16.86■□□□□ 0.29
NCKIPSD-205ENST00000426678 HMGB1P09429 215 aaKnown RBP16.85■□□□□ 0.29
NCKIPSD-205ENST00000426678 SMPD1P17405 629 aa16.85■□□□□ 0.29
NCKIPSD-205ENST00000426678 RXRAP19793 462 aa16.85■□□□□ 0.29
NCKIPSD-205ENST00000426678 EDNRBP24530 442 aa16.85■□□□□ 0.29
NCKIPSD-205ENST00000426678 SNX17Q15036 470 aa16.85■□□□□ 0.29
NCKIPSD-205ENST00000426678 KCNA10Q16322 511 aa16.85■□□□□ 0.29
NCKIPSD-205ENST00000426678 ADCK5Q3MIX3 580 aa16.85■□□□□ 0.29
NCKIPSD-205ENST00000426678 GNASQ5JWF2 1037 aa16.85■□□□□ 0.29
NCKIPSD-205ENST00000426678 DHX32Q7L7V1 743 aaKnown RBP16.85■□□□□ 0.29
NCKIPSD-205ENST00000426678 SGMS1Q86VZ5 419 aa16.85■□□□□ 0.29
NCKIPSD-205ENST00000426678 NSUN6Q8TEA1 469 aaKnown RBP16.85■□□□□ 0.29
NCKIPSD-205ENST00000426678 RRP36Q96EU6 259 aaKnown RBP16.85■□□□□ 0.29
NCKIPSD-205ENST00000426678 GLT1D1Q96MS3 346 aa16.85■□□□□ 0.29
NCKIPSD-205ENST00000426678 STARD7Q9NQZ5 370 aa16.85■□□□□ 0.29
NCKIPSD-205ENST00000426678 SEC63Q9UGP8 760 aaKnown RBP16.85■□□□□ 0.29
NCKIPSD-205ENST00000426678 GNEQ9Y223 722 aaKnown RBP16.85■□□□□ 0.29
NCKIPSD-205ENST00000426678 ASGR1P07306 291 aa16.84■□□□□ 0.29
NCKIPSD-205ENST00000426678 SMARCA1P28370 1054 aa16.84■□□□□ 0.29
NCKIPSD-205ENST00000426678 HSPA4P34932 840 aa16.84■□□□□ 0.29
NCKIPSD-205ENST00000426678 TRIM60Q495X7 471 aa16.84■□□□□ 0.29
NCKIPSD-205ENST00000426678 C1orf53Q5VUE5 145 aa16.84■□□□□ 0.29
NCKIPSD-205ENST00000426678 ARHGEF16Q5VV41 709 aa16.84■□□□□ 0.29
NCKIPSD-205ENST00000426678 CCSAPQ6IQ19 270 aaPredicted RBP16.84■□□□□ 0.29
NCKIPSD-205ENST00000426678 MICU3Q86XE3 530 aa16.84■□□□□ 0.29
NCKIPSD-205ENST00000426678 RAB11FIP4Q86YS3 637 aa16.84■□□□□ 0.29
NCKIPSD-205ENST00000426678 PIBF1Q8WXW3 757 aa16.84■□□□□ 0.29
NCKIPSD-205ENST00000426678 TCEANC2Q96MN5 208 aa16.84■□□□□ 0.29
NCKIPSD-205ENST00000426678 TAAR1Q96RJ0 339 aa16.84■□□□□ 0.29
NCKIPSD-205ENST00000426678 RMDN3Q96TC7 470 aa16.84■□□□□ 0.29
NCKIPSD-205ENST00000426678 MAP3K20Q9NYL2 800 aaKnown RBP16.84■□□□□ 0.29
NCKIPSD-205ENST00000426678 COL20A1Q9P218 1284 aa16.84■□□□□ 0.29
NCKIPSD-205ENST00000426678 OPLAHO14841 1288 aa16.83■□□□□ 0.28
NCKIPSD-205ENST00000426678 DYNC1LI2O43237 492 aaPredicted RBP16.83■□□□□ 0.28
NCKIPSD-205ENST00000426678 ZEB2O60315 1214 aa16.83■□□□□ 0.28
NCKIPSD-205ENST00000426678 PLEKHA8P1O95397 391 aa16.83■□□□□ 0.28
NCKIPSD-205ENST00000426678 HSD17B4P51659 736 aa16.83■□□□□ 0.28
NCKIPSD-205ENST00000426678 IRX5P78411 483 aaPredicted RBP16.83■□□□□ 0.28
NCKIPSD-205ENST00000426678 FGD1P98174 961 aa16.83■□□□□ 0.28
NCKIPSD-205ENST00000426678 EXOSC10Q01780 885 aaKnown RBP16.83■□□□□ 0.28
NCKIPSD-205ENST00000426678 PPP2R5BQ15173 497 aa16.83■□□□□ 0.28
NCKIPSD-205ENST00000426678 FSCN1Q16658 493 aaKnown RBP16.83■□□□□ 0.28
NCKIPSD-205ENST00000426678 DUSP28Q4G0W2 176 aa16.83■□□□□ 0.28
NCKIPSD-205ENST00000426678 SAMD3Q8N6K7 520 aa16.83■□□□□ 0.28
NCKIPSD-205ENST00000426678 SCFD2Q8WU76 684 aa16.83■□□□□ 0.28
NCKIPSD-205ENST00000426678 VTI1AQ96AJ9 217 aa16.83■□□□□ 0.28
NCKIPSD-205ENST00000426678 JAKMIP1Q96N16 626 aaKnown RBP16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms