RNA–Protein interactions for RNA: ENST00000426447.3

PDAP1-202, Transcript of PDGFA associated protein 1, humanhuman

TSL 5

Gene PDAP1, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDAP1-202ENST00000426447 MYO9BQ13459 2157 aa17.39■□□□□ 0.37
PDAP1-202ENST00000426447 GREB1LQ9C091 1923 aaPredicted RBP17.39■□□□□ 0.37
PDAP1-202ENST00000426447 M0R2C6 588 aa17.38■□□□□ 0.37
PDAP1-202ENST00000426447 POU3F3P20264 500 aaPredicted RBP17.38■□□□□ 0.37
PDAP1-202ENST00000426447 CPT1AP50416 773 aa17.38■□□□□ 0.37
PDAP1-202ENST00000426447 DUSP28Q4G0W2 176 aa17.38■□□□□ 0.37
PDAP1-202ENST00000426447 VWCEQ96DN2 955 aa17.38■□□□□ 0.37
PDAP1-202ENST00000426447 PURBQ96QR8 312 aaKnown RBP17.38■□□□□ 0.37
PDAP1-202ENST00000426447 ADD3Q9UEY8 706 aaKnown RBP17.38■□□□□ 0.37
PDAP1-202ENST00000426447 PRR12Q9ULL5 1215 aa17.38■□□□□ 0.37
PDAP1-202ENST00000426447 MTMR7Q9Y216 660 aa17.38■□□□□ 0.37
PDAP1-202ENST00000426447 HCN4Q9Y3Q4 1203 aa17.38■□□□□ 0.37
PDAP1-202ENST00000426447 MCM3APO60318 1980 aa17.38■□□□□ 0.37
PDAP1-202ENST00000426447 PLA2G6O60733 806 aa17.37■□□□□ 0.37
PDAP1-202ENST00000426447 BRDTQ58F21 947 aaPredicted RBP17.37■□□□□ 0.37
PDAP1-202ENST00000426447 PHOSPHO2Q8TCD6 241 aa17.37■□□□□ 0.37
PDAP1-202ENST00000426447 SLC9A7Q96T83 725 aa17.37■□□□□ 0.37
PDAP1-202ENST00000426447 MTG1Q9BT17 334 aaPredicted RBP17.37■□□□□ 0.37
PDAP1-202ENST00000426447 NAPBQ9H115 298 aa17.37■□□□□ 0.37
PDAP1-202ENST00000426447 EPHX3Q9H6B9 360 aa17.37■□□□□ 0.37
PDAP1-202ENST00000426447 TSPY2A6NKD2 308 aa17.36■□□□□ 0.37
PDAP1-202ENST00000426447 RFC2P35250 354 aa17.36■□□□□ 0.37
PDAP1-202ENST00000426447 PURAQ00577 322 aaKnown RBP17.36■□□□□ 0.37
PDAP1-202ENST00000426447 PPARAQ07869 468 aa17.36■□□□□ 0.37
PDAP1-202ENST00000426447 BAATQ14032 418 aaPredicted RBP17.36■□□□□ 0.37
PDAP1-202ENST00000426447 KRT40Q6A162 431 aa17.36■□□□□ 0.37
PDAP1-202ENST00000426447 OR6J1Q8NGC5 347 aa17.36■□□□□ 0.37
PDAP1-202ENST00000426447 HLA-CQ95604 372 aa17.36■□□□□ 0.37
PDAP1-202ENST00000426447 LRFN3Q9BTN0 628 aa17.36■□□□□ 0.37
PDAP1-202ENST00000426447 ICAM1P05362 532 aa17.35■□□□□ 0.37
PDAP1-202ENST00000426447 CCDC96Q2M329 555 aa17.35■□□□□ 0.37
PDAP1-202ENST00000426447 NBPF20Q3BBV1 942 aa17.35■□□□□ 0.37
PDAP1-202ENST00000426447 TMEM31Q5JXX7 168 aa17.35■□□□□ 0.37
PDAP1-202ENST00000426447 TSHZ3Q63HK5 1081 aa17.35■□□□□ 0.37
PDAP1-202ENST00000426447 MORC4Q8TE76 937 aa17.35■□□□□ 0.37
PDAP1-202ENST00000426447 NOD1Q9Y239 953 aa17.35■□□□□ 0.37
PDAP1-202ENST00000426447 PLIN4Q96Q06 1357 aa17.35■□□□□ 0.37
PDAP1-202ENST00000426447 MYH4Q9Y623 1939 aa17.35■□□□□ 0.37
PDAP1-202ENST00000426447 TCF20Q9UGU0 1960 aaKnown RBP17.35■□□□□ 0.37
PDAP1-202ENST00000426447 CHD9Q3L8U1 2897 aa17.34■□□□□ 0.37
PDAP1-202ENST00000426447 PTPDC1A2A3K4 754 aa17.34■□□□□ 0.37
PDAP1-202ENST00000426447 EPOPA6NHQ4 379 aa17.34■□□□□ 0.37
PDAP1-202ENST00000426447 TLL1O43897 1013 aa17.34■□□□□ 0.37
PDAP1-202ENST00000426447 IQCF3P0C7M6 154 aa17.34■□□□□ 0.37
PDAP1-202ENST00000426447 HOXD11P31277 338 aaPredicted RBP17.34■□□□□ 0.37
PDAP1-202ENST00000426447 ALDH5A1P51649 535 aaPredicted RBP17.34■□□□□ 0.37
PDAP1-202ENST00000426447 CHMP4BP1P59074 171 aa17.34■□□□□ 0.37
PDAP1-202ENST00000426447 TAP1Q03518 808 aa17.34■□□□□ 0.37
PDAP1-202ENST00000426447 HERC6Q8IVU3 1022 aa17.34■□□□□ 0.37
PDAP1-202ENST00000426447 GBF1Q92538 1859 aa17.34■□□□□ 0.37
PDAP1-202ENST00000426447 RAD50Q92878 1312 aa17.34■□□□□ 0.37
PDAP1-202ENST00000426447 SEC62Q99442 399 aaKnown RBP17.34■□□□□ 0.37
PDAP1-202ENST00000426447 MYH7P12883 1935 aa17.33■□□□□ 0.37
PDAP1-202ENST00000426447 KPNA6O60684 536 aa17.33■□□□□ 0.36
PDAP1-202ENST00000426447 KCNJ6P48051 423 aa17.33■□□□□ 0.36
PDAP1-202ENST00000426447 BFSP2Q13515 415 aa17.33■□□□□ 0.36
PDAP1-202ENST00000426447 PPP1R13LQ8WUF5 828 aa17.33■□□□□ 0.36
PDAP1-202ENST00000426447 MPHOSPH6Q99547 160 aaKnown RBP17.33■□□□□ 0.36
PDAP1-202ENST00000426447 ZBED2Q9BTP6 218 aa17.33■□□□□ 0.36
PDAP1-202ENST00000426447 ARIH1Q9Y4X5 557 aaPredicted RBP17.33■□□□□ 0.36
PDAP1-202ENST00000426447 LOC102724159A0A0B4J2E5 919 aa17.32■□□□□ 0.36
PDAP1-202ENST00000426447 PITPNM1O00562 1244 aa17.32■□□□□ 0.36
PDAP1-202ENST00000426447 RANBP6O60518 1105 aaKnown RBP17.32■□□□□ 0.36
PDAP1-202ENST00000426447 NMT2O60551 498 aa17.32■□□□□ 0.36
PDAP1-202ENST00000426447 CALML3P27482 149 aa17.32■□□□□ 0.36
PDAP1-202ENST00000426447 SLC16A2P36021 539 aa17.32■□□□□ 0.36
PDAP1-202ENST00000426447 PDE4DQ08499 809 aa17.32■□□□□ 0.36
PDAP1-202ENST00000426447 GRB10Q13322 594 aa17.32■□□□□ 0.36
PDAP1-202ENST00000426447 PWP2Q15269 919 aaKnown RBP17.32■□□□□ 0.36
PDAP1-202ENST00000426447 NFRKBQ6P4R8 1299 aa17.32■□□□□ 0.36
PDAP1-202ENST00000426447 IL17RBQ9NRM6 502 aa17.32■□□□□ 0.36
PDAP1-202ENST00000426447 RBM47A0AV96 593 aaKnown RBP17.31■□□□□ 0.36
PDAP1-202ENST00000426447 NFIBO00712 420 aa17.31■□□□□ 0.36
PDAP1-202ENST00000426447 NKRFO15226 690 aaKnown RBP eCLIP17.31■□□□□ 0.36
PDAP1-202ENST00000426447 CTDSPL2Q05D32 466 aa17.31■□□□□ 0.36
PDAP1-202ENST00000426447 PTPN11Q06124 597 aaPredicted RBP17.31■□□□□ 0.36
PDAP1-202ENST00000426447 PPP2R5BQ15173 497 aa17.31■□□□□ 0.36
PDAP1-202ENST00000426447 RASGRP2Q7LDG7 609 aa17.31■□□□□ 0.36
PDAP1-202ENST00000426447 DCAF4Q8WV16 495 aa17.31■□□□□ 0.36
PDAP1-202ENST00000426447 FSD1Q9BTV5 496 aa17.31■□□□□ 0.36
PDAP1-202ENST00000426447 RANBP17Q9H2T7 1088 aaKnown RBP17.31■□□□□ 0.36
PDAP1-202ENST00000426447 INCENPQ9NQS7 918 aa17.31■□□□□ 0.36
PDAP1-202ENST00000426447 BAIAP3O94812 1187 aa17.3■□□□□ 0.36
PDAP1-202ENST00000426447 ARHGEF15O94989 841 aa17.3■□□□□ 0.36
PDAP1-202ENST00000426447 TTBK2Q6IQ55 1244 aa17.3■□□□□ 0.36
PDAP1-202ENST00000426447 RNF207Q6ZRF8 634 aa17.3■□□□□ 0.36
PDAP1-202ENST00000426447 CCDC155Q8N6L0 562 aa17.3■□□□□ 0.36
PDAP1-202ENST00000426447 SCFD2Q8WU76 684 aa17.3■□□□□ 0.36
PDAP1-202ENST00000426447 GPCPD1Q9NPB8 672 aa17.3■□□□□ 0.36
PDAP1-202ENST00000426447 A6NJR5 290 aa17.29■□□□□ 0.36
PDAP1-202ENST00000426447 B4DLN1 442 aa17.29■□□□□ 0.36
PDAP1-202ENST00000426447 TXNP10599 105 aaKnown RBP17.29■□□□□ 0.36
PDAP1-202ENST00000426447 MRPL12P52815 198 aaKnown RBP17.29■□□□□ 0.36
PDAP1-202ENST00000426447 PTGISQ16647 500 aa17.29■□□□□ 0.36
PDAP1-202ENST00000426447 SYDE2Q5VT97 1194 aa17.29■□□□□ 0.36
PDAP1-202ENST00000426447 COPS5Q92905 334 aa17.29■□□□□ 0.36
PDAP1-202ENST00000426447 TOMM22Q9NS69 142 aa17.29■□□□□ 0.36
PDAP1-202ENST00000426447 FRMPD2Q68DX3 1309 aaPredicted RBP17.28■□□□□ 0.36
PDAP1-202ENST00000426447 GPR37L1O60883 481 aa17.28■□□□□ 0.36
PDAP1-202ENST00000426447 ZMYM1Q5SVZ6 1142 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms