RNA–Protein interactions for RNA: ENST00000424443.7

TSPAN3-203, Transcript of tetraspanin 3, humanhuman

TSL 2 BASIC

Gene TSPAN3, Length 1,530 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-203ENST00000424443 ZNF467Q7Z7K2 595 aaPredicted RBP29.3■■■□□ 2.28
TSPAN3-203ENST00000424443 TINF2Q9BSI4 451 aa29.3■■■□□ 2.28
TSPAN3-203ENST00000424443 RNF26Q9BY78 433 aaPredicted RBP29.3■■■□□ 2.28
TSPAN3-203ENST00000424443 HTTP42858 3142 aa29.29■■■□□ 2.28
TSPAN3-203ENST00000424443 hCG_1984214I3L0E3 225 aa29.29■■■□□ 2.28
TSPAN3-203ENST00000424443 PRPF3O43395 683 aaKnown RBP29.29■■■□□ 2.28
TSPAN3-203ENST00000424443 PRKAR2AP13861 404 aaKnown RBP29.29■■■□□ 2.28
TSPAN3-203ENST00000424443 CYP2C19P33261 490 aa29.29■■■□□ 2.28
TSPAN3-203ENST00000424443 ME3Q16798 604 aa29.29■■■□□ 2.28
TSPAN3-203ENST00000424443 MSL3Q8N5Y2 521 aaKnown RBP29.29■■■□□ 2.28
TSPAN3-203ENST00000424443 SAMD3Q8N6K7 520 aa29.29■■■□□ 2.28
TSPAN3-203ENST00000424443 ZNF713Q8N859 430 aaPredicted RBP29.29■■■□□ 2.28
TSPAN3-203ENST00000424443 GPKOWQ92917 476 aaPredicted RBP eCLIP29.29■■■□□ 2.28
TSPAN3-203ENST00000424443 MAP3K20Q9NYL2 800 aaKnown RBP29.29■■■□□ 2.28
TSPAN3-203ENST00000424443 TRIM32Q13049 653 aa29.28■■■□□ 2.28
TSPAN3-203ENST00000424443 TBC1D5Q92609 795 aa29.28■■■□□ 2.28
TSPAN3-203ENST00000424443 MPHOSPH6Q99547 160 aaKnown RBP29.28■■■□□ 2.28
TSPAN3-203ENST00000424443 RBBP6Q7Z6E9 1792 aaKnown RBP29.28■■■□□ 2.28
TSPAN3-203ENST00000424443 ASB14A6NK59 587 aa29.27■■■□□ 2.28
TSPAN3-203ENST00000424443 CCDC85CA6NKD9 419 aa29.27■■■□□ 2.28
TSPAN3-203ENST00000424443 GCOM1H8Y6P7 765 aaPredicted RBP29.27■■■□□ 2.28
TSPAN3-203ENST00000424443 PPFIA3O75145 1194 aa29.27■■■□□ 2.28
TSPAN3-203ENST00000424443 POLR2MP0CAP2 368 aa29.27■■■□□ 2.28
TSPAN3-203ENST00000424443 NAPAP54920 295 aa29.27■■■□□ 2.28
TSPAN3-203ENST00000424443 CACNB2Q08289 660 aaPredicted RBP29.27■■■□□ 2.28
TSPAN3-203ENST00000424443 PFKFB3Q16875 520 aaPredicted RBP29.27■■■□□ 2.28
TSPAN3-203ENST00000424443 CUL5Q93034 780 aa29.27■■■□□ 2.28
TSPAN3-203ENST00000424443 ZSCAN31Q96LW9 406 aaPredicted RBP29.27■■■□□ 2.28
TSPAN3-203ENST00000424443 TMEM106CQ9BVX2 250 aa29.27■■■□□ 2.28
TSPAN3-203ENST00000424443 HMX1Q9NP08 348 aaPredicted RBP29.27■■■□□ 2.28
TSPAN3-203ENST00000424443 SOWAHBA6NEL2 793 aa29.26■■■□□ 2.27
TSPAN3-203ENST00000424443 SCG2P13521 617 aa29.26■■■□□ 2.27
TSPAN3-203ENST00000424443 WWC2Q6AWC2 1192 aa29.26■■■□□ 2.27
TSPAN3-203ENST00000424443 NECAB1Q8N987 351 aa29.26■■■□□ 2.27
TSPAN3-203ENST00000424443 RPTORQ8N122 1335 aa29.26■■■□□ 2.27
TSPAN3-203ENST00000424443 SYNGAP1Q96PV0 1343 aa29.26■■■□□ 2.27
TSPAN3-203ENST00000424443 OPLAHO14841 1288 aa29.25■■■□□ 2.27
TSPAN3-203ENST00000424443 LARGE1O95461 756 aa29.25■■■□□ 2.27
TSPAN3-203ENST00000424443 CCL5P13501 91 aa29.25■■■□□ 2.27
TSPAN3-203ENST00000424443 MTFR1Q15390 333 aa29.25■■■□□ 2.27
TSPAN3-203ENST00000424443 MAMDC4Q6UXC1 1216 aa29.25■■■□□ 2.27
TSPAN3-203ENST00000424443 DNERQ8NFT8 737 aa29.25■■■□□ 2.27
TSPAN3-203ENST00000424443 SYTL5Q8TDW5 730 aaPredicted RBP29.25■■■□□ 2.27
TSPAN3-203ENST00000424443 GTF3C6Q969F1 213 aa29.25■■■□□ 2.27
TSPAN3-203ENST00000424443 PURBQ96QR8 312 aaKnown RBP29.25■■■□□ 2.27
TSPAN3-203ENST00000424443 RNF208Q9H0X6 261 aa29.25■■■□□ 2.27
TSPAN3-203ENST00000424443 CNPY2Q9Y2B0 182 aa29.25■■■□□ 2.27
TSPAN3-203ENST00000424443 B4DLN1 442 aa29.25■■■□□ 2.27
TSPAN3-203ENST00000424443 HSD17B4P51659 736 aa29.25■■■□□ 2.27
TSPAN3-203ENST00000424443 MRPL12P52815 198 aaKnown RBP29.25■■■□□ 2.27
TSPAN3-203ENST00000424443 PPP1R18Q6NYC8 613 aa29.25■■■□□ 2.27
TSPAN3-203ENST00000424443 PSTPIP2Q9H939 334 aa29.25■■■□□ 2.27
TSPAN3-203ENST00000424443 BARHL2Q9NY43 387 aa29.25■■■□□ 2.27
TSPAN3-203ENST00000424443 CNGA1P29973 690 aa29.24■■■□□ 2.27
TSPAN3-203ENST00000424443 ALDH5A1P51649 535 aaPredicted RBP29.24■■■□□ 2.27
TSPAN3-203ENST00000424443 SMARCC2Q8TAQ2 1214 aa29.24■■■□□ 2.27
TSPAN3-203ENST00000424443 CCDC12Q8WUD4 166 aaPredicted RBP29.24■■■□□ 2.27
TSPAN3-203ENST00000424443 FGD4Q96M96 766 aa29.24■■■□□ 2.27
TSPAN3-203ENST00000424443 DEXIO95424 95 aa29.23■■■□□ 2.27
TSPAN3-203ENST00000424443 HOXA13P31271 388 aaPredicted RBP29.23■■■□□ 2.27
TSPAN3-203ENST00000424443 MAP3K21Q5TCX8 1036 aa29.23■■■□□ 2.27
TSPAN3-203ENST00000424443 ARMCX2Q7L311 632 aa29.23■■■□□ 2.27
TSPAN3-203ENST00000424443 UNC93B1Q9H1C4 597 aa29.23■■■□□ 2.27
TSPAN3-203ENST00000424443 SH2B1Q9NRF2 756 aaPredicted RBP29.23■■■□□ 2.27
TSPAN3-203ENST00000424443 CENPFP49454 3210 aa29.22■■■□□ 2.27
TSPAN3-203ENST00000424443 LOC102724159A0A0B4J2E5 919 aa29.22■■■□□ 2.27
TSPAN3-203ENST00000424443 MCM2P49736 904 aa29.22■■■□□ 2.27
TSPAN3-203ENST00000424443 GHRHRQ02643 423 aa29.22■■■□□ 2.27
TSPAN3-203ENST00000424443 PWP2Q15269 919 aaKnown RBP29.22■■■□□ 2.27
TSPAN3-203ENST00000424443 ARHGEF16Q5VV41 709 aa29.22■■■□□ 2.27
TSPAN3-203ENST00000424443 NSUN6Q8TEA1 469 aaKnown RBP29.22■■■□□ 2.27
TSPAN3-203ENST00000424443 RMDN3Q96TC7 470 aa29.22■■■□□ 2.27
TSPAN3-203ENST00000424443 CDKN2AIPQ9NXV6 580 aaPredicted RBP29.22■■■□□ 2.27
TSPAN3-203ENST00000424443 NRBP1Q9UHY1 535 aa29.22■■■□□ 2.27
TSPAN3-203ENST00000424443 STXBP3O00186 592 aa29.21■■■□□ 2.27
TSPAN3-203ENST00000424443 IGHA2P01877 340 aa29.21■■■□□ 2.27
TSPAN3-203ENST00000424443 PKN1Q16512 942 aa29.21■■■□□ 2.27
TSPAN3-203ENST00000424443 FCHSD1Q86WN1 690 aa29.21■■■□□ 2.27
TSPAN3-203ENST00000424443 TAAR1Q96RJ0 339 aa29.21■■■□□ 2.27
TSPAN3-203ENST00000424443 XRN2Q9H0D6 950 aaKnown RBP eCLIP29.21■■■□□ 2.274e-7■■■□□ 14.7
TSPAN3-203ENST00000424443 PRAMEF19Q5SWL8 479 aa29.2■■■□□ 2.27
TSPAN3-203ENST00000424443 GLT8D2Q9H1C3 349 aa29.2■■■□□ 2.27
TSPAN3-203ENST00000424443 ABHD16BQ9H3Z7 469 aa29.2■■■□□ 2.27
TSPAN3-203ENST00000424443 COL20A1Q9P218 1284 aa29.2■■■□□ 2.27
TSPAN3-203ENST00000424443 ASTN1O14525 1302 aa29.2■■■□□ 2.26
TSPAN3-203ENST00000424443 SMCO2A6NFE2 343 aa29.2■■■□□ 2.26
TSPAN3-203ENST00000424443 CYBAP13498 195 aa29.2■■■□□ 2.26
TSPAN3-203ENST00000424443 CCND3P30281 292 aaPredicted RBP29.2■■■□□ 2.26
TSPAN3-203ENST00000424443 PDE4DQ08499 809 aa29.2■■■□□ 2.26
TSPAN3-203ENST00000424443 USP17L6PQ6QN14 398 aa29.2■■■□□ 2.26
TSPAN3-203ENST00000424443 CCDC83Q8IWF9 413 aa29.2■■■□□ 2.26
TSPAN3-203ENST00000424443 ZHX1Q9UKY1 873 aaPredicted RBP29.2■■■□□ 2.26
TSPAN3-203ENST00000424443 LCTP09848 1927 aa29.19■■■□□ 2.26
TSPAN3-203ENST00000424443 SNAI1O95863 264 aaPredicted RBP29.19■■■□□ 2.26
TSPAN3-203ENST00000424443 ADCY7P51828 1080 aa29.19■■■□□ 2.26
TSPAN3-203ENST00000424443 CCDC148Q8NFR7 591 aa29.19■■■□□ 2.26
TSPAN3-203ENST00000424443 STK36Q9NRP7 1315 aa29.18■■■□□ 2.26
TSPAN3-203ENST00000424443 PIK3CDO00329 1044 aa29.18■■■□□ 2.26
TSPAN3-203ENST00000424443 ACVR2BQ13705 512 aa29.18■■■□□ 2.26
TSPAN3-203ENST00000424443 TYW1BQ6NUM6 668 aa29.18■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms