RNA–Protein interactions for RNA: ENST00000422121.2

NF1-203, Transcript of neurofibromin 1, humanhuman

TSL 3

Gene NF1, Length 619 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-203ENST00000422121 VAT1LQ9HCJ6 419 aa11.56□□□□□ -0.56
NF1-203ENST00000422121 SYNGAP1Q96PV0 1343 aa11.56□□□□□ -0.56
NF1-203ENST00000422121 LAMA3Q16787 3333 aa11.55□□□□□ -0.56
NF1-203ENST00000422121 SZT2Q5T011 3432 aa11.55□□□□□ -0.56
NF1-203ENST00000422121 CPA1P15085 419 aa11.55□□□□□ -0.56
NF1-203ENST00000422121 CAPN2P17655 700 aa11.55□□□□□ -0.56
NF1-203ENST00000422121 PTGS1P23219 599 aa11.55□□□□□ -0.56
NF1-203ENST00000422121 MCM5P33992 734 aa11.55□□□□□ -0.56
NF1-203ENST00000422121 HSPA4P34932 840 aa11.55□□□□□ -0.56
NF1-203ENST00000422121 LIFRP42702 1097 aa11.55□□□□□ -0.56
NF1-203ENST00000422121 IRX5P78411 483 aaPredicted RBP11.55□□□□□ -0.56
NF1-203ENST00000422121 CDC37Q16543 378 aaPredicted RBP11.55□□□□□ -0.56
NF1-203ENST00000422121 TPRNQ4KMQ1 711 aa11.55□□□□□ -0.56
NF1-203ENST00000422121 LCE2DQ5TA82 110 aaPredicted RBP11.55□□□□□ -0.56
NF1-203ENST00000422121 POTEGQ6S5H5 508 aa11.55□□□□□ -0.56
NF1-203ENST00000422121 SLC30A10Q6XR72 485 aa11.55□□□□□ -0.56
NF1-203ENST00000422121 CCDC144CPQ8IYA2 1237 aa11.55□□□□□ -0.56
NF1-203ENST00000422121 MORC4Q8TE76 937 aa11.55□□□□□ -0.56
NF1-203ENST00000422121 LENG1Q96BZ8 264 aaPredicted RBP11.55□□□□□ -0.56
NF1-203ENST00000422121 TCEANC2Q96MN5 208 aa11.55□□□□□ -0.56
NF1-203ENST00000422121 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.55□□□□□ -0.56
NF1-203ENST00000422121 NRBP1Q9UHY1 535 aa11.55□□□□□ -0.56
NF1-203ENST00000422121 CEP290O15078 2479 aa11.55□□□□□ -0.56
NF1-203ENST00000422121 LAMA2P24043 3122 aaKnown RBP11.54□□□□□ -0.56
NF1-203ENST00000422121 FRMPD3Q5JV73 1810 aa11.54□□□□□ -0.56
NF1-203ENST00000422121 RPS6P62753 249 aaKnown RBP11.54□□□□□ -0.56
NF1-203ENST00000422121 ACVR2BQ13705 512 aa11.54□□□□□ -0.56
NF1-203ENST00000422121 USH1GQ495M9 461 aa11.54□□□□□ -0.56
NF1-203ENST00000422121 GJC2Q5T442 439 aaPredicted RBP11.54□□□□□ -0.56
NF1-203ENST00000422121 NSMFQ6X4W1 530 aa11.54□□□□□ -0.56
NF1-203ENST00000422121 MAMSTRQ6ZN01 415 aa11.54□□□□□ -0.56
NF1-203ENST00000422121 ARMCX2Q7L311 632 aa11.54□□□□□ -0.56
NF1-203ENST00000422121 NECAB2Q7Z6G3 386 aa11.54□□□□□ -0.56
NF1-203ENST00000422121 ZNF654Q8IZM8 581 aa11.54□□□□□ -0.56
NF1-203ENST00000422121 RGS22Q8NE09 1264 aa11.54□□□□□ -0.56
NF1-203ENST00000422121 TMEM87BQ96K49 555 aa11.54□□□□□ -0.56
NF1-203ENST00000422121 NEK1Q96PY6 1258 aa11.54□□□□□ -0.56
NF1-203ENST00000422121 COL20A1Q9P218 1284 aa11.54□□□□□ -0.56
NF1-203ENST00000422121 PCDH10Q9P2E7 1040 aa11.54□□□□□ -0.56
NF1-203ENST00000422121 BRPF3Q9ULD4 1205 aa11.54□□□□□ -0.56
NF1-203ENST00000422121 SNX14Q9Y5W7 946 aa11.54□□□□□ -0.56
NF1-203ENST00000422121 BAZ2BQ9UIF8 2168 aaKnown RBP11.54□□□□□ -0.56
NF1-203ENST00000422121 MCM3APO60318 1980 aa11.54□□□□□ -0.56
NF1-203ENST00000422121 ALPK3Q96L96 1907 aa11.53□□□□□ -0.56
NF1-203ENST00000422121 CTAGE5O15320 804 aa11.53□□□□□ -0.56
NF1-203ENST00000422121 ADAMTS4O75173 837 aa11.53□□□□□ -0.56
NF1-203ENST00000422121 RXRAP19793 462 aa11.53□□□□□ -0.56
NF1-203ENST00000422121 CCSAPQ6IQ19 270 aaPredicted RBP11.53□□□□□ -0.56
NF1-203ENST00000422121 TAPT1Q6NXT6 567 aa11.53□□□□□ -0.56
NF1-203ENST00000422121 CASC1Q6TDU7 716 aa11.53□□□□□ -0.56
NF1-203ENST00000422121 DHX32Q7L7V1 743 aaKnown RBP11.53□□□□□ -0.56
NF1-203ENST00000422121 SGMS1Q86VZ5 419 aa11.53□□□□□ -0.56
NF1-203ENST00000422121 RAB11FIP4Q86YS3 637 aa11.53□□□□□ -0.56
NF1-203ENST00000422121 KCNV2Q8TDN2 545 aa11.53□□□□□ -0.56
NF1-203ENST00000422121 PIGSQ96S52 555 aa11.53□□□□□ -0.56
NF1-203ENST00000422121 MAP3K14Q99558 947 aa11.53□□□□□ -0.56
NF1-203ENST00000422121 USP26Q9BXU7 913 aa11.53□□□□□ -0.56
NF1-203ENST00000422121 C11orf49Q9H6J7 331 aa11.53□□□□□ -0.56
NF1-203ENST00000422121 PDGFCQ9NRA1 345 aa11.53□□□□□ -0.56
NF1-203ENST00000422121 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.52□□□□□ -0.57
NF1-203ENST00000422121 ERICH2A1L162 156 aa11.52□□□□□ -0.57
NF1-203ENST00000422121 MYADML2A6NDP7 307 aa11.52□□□□□ -0.57
NF1-203ENST00000422121 H0YGN5 161 aa11.52□□□□□ -0.57
NF1-203ENST00000422121 ZBTB5O15062 677 aa11.52□□□□□ -0.57
NF1-203ENST00000422121 MSCO60682 206 aa11.52□□□□□ -0.57
NF1-203ENST00000422121 PLEKHA8P1O95397 391 aa11.52□□□□□ -0.57
NF1-203ENST00000422121 SEC24BO95487 1268 aa11.52□□□□□ -0.57
NF1-203ENST00000422121 PGK1P00558 417 aa11.52□□□□□ -0.57
NF1-203ENST00000422121 GHRHRQ02643 423 aa11.52□□□□□ -0.57
NF1-203ENST00000422121 SART3Q15020 963 aaKnown RBP11.52□□□□□ -0.57
NF1-203ENST00000422121 LRRC41Q15345 812 aa11.52□□□□□ -0.57
NF1-203ENST00000422121 CCDC144BQ3MJ40 725 aa11.52□□□□□ -0.57
NF1-203ENST00000422121 PRPF38BQ5VTL8 546 aaKnown RBP11.52□□□□□ -0.57
NF1-203ENST00000422121 RNF20Q5VTR2 975 aa11.52□□□□□ -0.57
NF1-203ENST00000422121 RNF207Q6ZRF8 634 aa11.52□□□□□ -0.57
NF1-203ENST00000422121 CATIPQ7Z7H3 387 aa11.52□□□□□ -0.57
NF1-203ENST00000422121 CMTR1Q8N1G2 835 aaKnown RBP11.52□□□□□ -0.57
NF1-203ENST00000422121 SRBD1Q8N5C6 995 aaKnown RBP11.52□□□□□ -0.57
NF1-203ENST00000422121 KLHDC9Q8NEP7 349 aa11.52□□□□□ -0.57
NF1-203ENST00000422121 SYTL5Q8TDW5 730 aaPredicted RBP11.52□□□□□ -0.57
NF1-203ENST00000422121 NUP133Q8WUM0 1156 aa11.52□□□□□ -0.57
NF1-203ENST00000422121 ABHD16BQ9H3Z7 469 aa11.52□□□□□ -0.57
NF1-203ENST00000422121 SCUBE2Q9NQ36 999 aa11.52□□□□□ -0.57
NF1-203ENST00000422121 FAM217BQ9NTX9 383 aaPredicted RBP11.52□□□□□ -0.57
NF1-203ENST00000422121 CNPY2Q9Y2B0 182 aa11.52□□□□□ -0.57
NF1-203ENST00000422121 PTPDC1A2A3K4 754 aa11.51□□□□□ -0.57
NF1-203ENST00000422121 DNM1LO00429 736 aa11.51□□□□□ -0.57
NF1-203ENST00000422121 DDAH1O94760 285 aa11.51□□□□□ -0.57
NF1-203ENST00000422121 AKR1A1P14550 325 aa11.51□□□□□ -0.57
NF1-203ENST00000422121 EDNRBP24530 442 aa11.51□□□□□ -0.57
NF1-203ENST00000422121 CALML3P27482 149 aa11.51□□□□□ -0.57
NF1-203ENST00000422121 ALDH5A1P51649 535 aaPredicted RBP11.51□□□□□ -0.57
NF1-203ENST00000422121 FUT2Q10981 343 aa11.51□□□□□ -0.57
NF1-203ENST00000422121 LRRC26Q2I0M4 334 aa11.51□□□□□ -0.57
NF1-203ENST00000422121 FBXO11Q86XK2 927 aa11.51□□□□□ -0.57
NF1-203ENST00000422121 TMTC2Q8N394 836 aa11.51□□□□□ -0.57
NF1-203ENST00000422121 DPF3Q92784 378 aa11.51□□□□□ -0.57
NF1-203ENST00000422121 TAAR1Q96RJ0 339 aa11.51□□□□□ -0.57
NF1-203ENST00000422121 AMNQ9BXJ7 453 aa11.51□□□□□ -0.57
NF1-203ENST00000422121 ZHX1Q9UKY1 873 aaPredicted RBP11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms