RNA–Protein interactions for RNA: ENST00000421378.2

LINC00271-201, long intergenic non-protein coding RNA 271, humanhuman

TSL 1 (best) BASIC

Gene LINC00271, Length 1,580 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00271-201ENST00000421378 TRIM29Q14134 588 aa20.16■□□□□ 0.82
LINC00271-201ENST00000421378 SLC30A10Q6XR72 485 aa20.16■□□□□ 0.82
LINC00271-201ENST00000421378 NUDT12Q9BQG2 462 aa20.16■□□□□ 0.82
LINC00271-201ENST00000421378 GLT8D2Q9H1C3 349 aa20.16■□□□□ 0.82
LINC00271-201ENST00000421378 GJB4Q9NTQ9 266 aa20.16■□□□□ 0.82
LINC00271-201ENST00000421378 MAP3K20Q9NYL2 800 aaKnown RBP20.16■□□□□ 0.82
LINC00271-201ENST00000421378 RBM19Q9Y4C8 960 aaKnown RBP20.16■□□□□ 0.82
LINC00271-201ENST00000421378 GCOM1H8Y6P7 765 aaPredicted RBP20.15■□□□□ 0.82
LINC00271-201ENST00000421378 POLR2MP0CAP2 368 aa20.15■□□□□ 0.82
LINC00271-201ENST00000421378 CALML3P27482 149 aa20.15■□□□□ 0.82
LINC00271-201ENST00000421378 GNA11P29992 359 aa20.15■□□□□ 0.82
LINC00271-201ENST00000421378 HOXA13P31271 388 aaPredicted RBP20.15■□□□□ 0.82
LINC00271-201ENST00000421378 HSD17B4P51659 736 aa20.15■□□□□ 0.82
LINC00271-201ENST00000421378 MRPL12P52815 198 aaKnown RBP20.15■□□□□ 0.82
LINC00271-201ENST00000421378 NLRP5P59047 1200 aa20.15■□□□□ 0.82
LINC00271-201ENST00000421378 GHRHRQ02643 423 aa20.15■□□□□ 0.82
LINC00271-201ENST00000421378 BAATQ14032 418 aaPredicted RBP20.15■□□□□ 0.82
LINC00271-201ENST00000421378 MORN1Q5T089 497 aa20.15■□□□□ 0.82
LINC00271-201ENST00000421378 SAMD3Q8N6K7 520 aa20.15■□□□□ 0.82
LINC00271-201ENST00000421378 TBC1D5Q92609 795 aa20.15■□□□□ 0.82
LINC00271-201ENST00000421378 C8orf76Q96K31 380 aa20.15■□□□□ 0.82
LINC00271-201ENST00000421378 C6orf50Q9HD87 102 aa20.15■□□□□ 0.82
LINC00271-201ENST00000421378 RIC8AQ9NPQ8 531 aa20.15■□□□□ 0.82
LINC00271-201ENST00000421378 DOCK3Q8IZD9 2030 aa20.14■□□□□ 0.82
LINC00271-201ENST00000421378 PIK3CDO00329 1044 aa20.14■□□□□ 0.81
LINC00271-201ENST00000421378 PGK2P07205 417 aa20.14■□□□□ 0.81
LINC00271-201ENST00000421378 HOXD10P28358 340 aa20.14■□□□□ 0.81
LINC00271-201ENST00000421378 FOSBP53539 338 aa20.14■□□□□ 0.81
LINC00271-201ENST00000421378 TEX2Q8IWB9 1127 aa20.14■□□□□ 0.81
LINC00271-201ENST00000421378 KCNJ14Q9UNX9 436 aa20.14■□□□□ 0.81
LINC00271-201ENST00000421378 DNAJC25-GNG10A0A024R161 153 aa20.13■□□□□ 0.81
LINC00271-201ENST00000421378 MEIS2O14770 477 aa20.13■□□□□ 0.81
LINC00271-201ENST00000421378 PRKCZQ05513 592 aa20.13■□□□□ 0.81
LINC00271-201ENST00000421378 MAP2K5Q13163 448 aa20.13■□□□□ 0.81
LINC00271-201ENST00000421378 USP17L6PQ6QN14 398 aa20.13■□□□□ 0.81
LINC00271-201ENST00000421378 DPP9Q86TI2 863 aa20.13■□□□□ 0.81
LINC00271-201ENST00000421378 SPRYD3Q8NCJ5 442 aa20.13■□□□□ 0.81
LINC00271-201ENST00000421378 BICD2Q8TD16 824 aa20.13■□□□□ 0.81
LINC00271-201ENST00000421378 PHF20Q9BVI0 1012 aa20.13■□□□□ 0.81
LINC00271-201ENST00000421378 GJD2Q9UKL4 321 aa20.13■□□□□ 0.81
LINC00271-201ENST00000421378 CASP8AP2Q9UKL3 1982 aa20.13■□□□□ 0.81
LINC00271-201ENST00000421378 POTEB2H3BUK9 544 aa20.12■□□□□ 0.81
LINC00271-201ENST00000421378 RGS2P41220 211 aa20.12■□□□□ 0.81
LINC00271-201ENST00000421378 UBE2SQ16763 222 aa20.12■□□□□ 0.81
LINC00271-201ENST00000421378 GALNT17Q6IS24 598 aa20.12■□□□□ 0.81
LINC00271-201ENST00000421378 SYTL5Q8TDW5 730 aaPredicted RBP20.12■□□□□ 0.81
LINC00271-201ENST00000421378 SLC5A4Q9NY91 659 aa20.12■□□□□ 0.81
LINC00271-201ENST00000421378 SRRDQ9UH36 339 aa20.12■□□□□ 0.81
LINC00271-201ENST00000421378 TRIM17Q9Y577 477 aa20.12■□□□□ 0.81
LINC00271-201ENST00000421378 ZNFX1Q9P2E3 1918 aaKnown RBP20.12■□□□□ 0.81
LINC00271-201ENST00000421378 COBLO75128 1261 aa20.12■□□□□ 0.81
LINC00271-201ENST00000421378 FLT3LGP49771 235 aa20.12■□□□□ 0.81
LINC00271-201ENST00000421378 KRT40Q6A162 431 aa20.12■□□□□ 0.81
LINC00271-201ENST00000421378 OTOP1Q7RTM1 612 aa20.12■□□□□ 0.81
LINC00271-201ENST00000421378 REXO1Q8N1G1 1221 aaKnown RBP20.12■□□□□ 0.81
LINC00271-201ENST00000421378 FAM133AQ8N9E0 248 aa20.12■□□□□ 0.81
LINC00271-201ENST00000421378 FBXO18Q8NFZ0 1043 aa20.12■□□□□ 0.81
LINC00271-201ENST00000421378 USP6NLQ92738 828 aa20.12■□□□□ 0.81
LINC00271-201ENST00000421378 APBA2Q99767 749 aa20.12■□□□□ 0.81
LINC00271-201ENST00000421378 COL20A1Q9P218 1284 aa20.12■□□□□ 0.81
LINC00271-201ENST00000421378 PCDHA4Q9UN74 947 aa20.12■□□□□ 0.81
LINC00271-201ENST00000421378 GABRQQ9UN88 632 aa20.12■□□□□ 0.81
LINC00271-201ENST00000421378 HTTP42858 3142 aa20.11■□□□□ 0.81
LINC00271-201ENST00000421378 LCTP09848 1927 aa20.11■□□□□ 0.81
LINC00271-201ENST00000421378 MMP1P03956 469 aa20.11■□□□□ 0.81
LINC00271-201ENST00000421378 HOXC6P09630 235 aa20.11■□□□□ 0.81
LINC00271-201ENST00000421378 PDCP20941 246 aa20.11■□□□□ 0.81
LINC00271-201ENST00000421378 GUCY1B3Q02153 619 aa20.11■□□□□ 0.81
LINC00271-201ENST00000421378 CNTN2Q02246 1040 aa20.11■□□□□ 0.81
LINC00271-201ENST00000421378 NPY5RQ15761 445 aa20.11■□□□□ 0.81
LINC00271-201ENST00000421378 LARP1BQ659C4 914 aaKnown RBP20.11■□□□□ 0.81
LINC00271-201ENST00000421378 FCHSD1Q86WN1 690 aa20.11■□□□□ 0.81
LINC00271-201ENST00000421378 DAGLBQ8NCG7 672 aa20.11■□□□□ 0.81
LINC00271-201ENST00000421378 PURBQ96QR8 312 aaKnown RBP20.11■□□□□ 0.81
LINC00271-201ENST00000421378 BRMS1Q9HCU9 246 aa20.11■□□□□ 0.81
LINC00271-201ENST00000421378 PLXNA1Q9UIW2 1896 aa20.1■□□□□ 0.81
LINC00271-201ENST00000421378 SPDYE3A6NKU9 549 aa20.1■□□□□ 0.81
LINC00271-201ENST00000421378 CYP2B6P20813 491 aa20.1■□□□□ 0.81
LINC00271-201ENST00000421378 ZNF792Q3KQV3 632 aa20.1■□□□□ 0.81
LINC00271-201ENST00000421378 BLIDQ8IZY5 108 aa20.1■□□□□ 0.81
LINC00271-201ENST00000421378 ADD3Q9UEY8 706 aaKnown RBP20.1■□□□□ 0.81
LINC00271-201ENST00000421378 CENPFP49454 3210 aa20.1■□□□□ 0.81
LINC00271-201ENST00000421378 CLK2P49760 499 aaKnown RBP20.09■□□□□ 0.81
LINC00271-201ENST00000421378 PRMT2P55345 433 aa20.09■□□□□ 0.81
LINC00271-201ENST00000421378 AP3B2Q13367 1082 aa20.09■□□□□ 0.81
LINC00271-201ENST00000421378 SAFBQ15424 915 aaKnown RBP eCLIP20.09■□□□□ 0.81
LINC00271-201ENST00000421378 DNERQ8NFT8 737 aa20.09■□□□□ 0.81
LINC00271-201ENST00000421378 BIN2Q9UBW5 565 aaPredicted RBP20.09■□□□□ 0.81
LINC00271-201ENST00000421378 DIS3Q9Y2L1 958 aaKnown RBP20.09■□□□□ 0.81
LINC00271-201ENST00000421378 H3BQV1 296 aa20.08■□□□□ 0.81
LINC00271-201ENST00000421378 ADAMTS3O15072 1205 aa20.08■□□□□ 0.81
LINC00271-201ENST00000421378 XRCC5P13010 732 aaKnown RBP20.08■□□□□ 0.81
LINC00271-201ENST00000421378 KRT2P35908 639 aa20.08■□□□□ 0.81
LINC00271-201ENST00000421378 IFFO2Q5TF58 517 aa20.08■□□□□ 0.81
LINC00271-201ENST00000421378 NPLOC4Q8TAT6 608 aa20.08■□□□□ 0.81
LINC00271-201ENST00000421378 RASGRP4Q8TDF6 673 aa20.08■□□□□ 0.81
LINC00271-201ENST00000421378 MAML3Q96JK9 1138 aa20.08■□□□□ 0.81
LINC00271-201ENST00000421378 TAAR1Q96RJ0 339 aa20.08■□□□□ 0.81
LINC00271-201ENST00000421378 RMDN3Q96TC7 470 aa20.08■□□□□ 0.81
LINC00271-201ENST00000421378 DAXXQ9UER7 740 aaPredicted RBP20.08■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms