RNA–Protein interactions for RNA: ENST00000420591.1

SNED1-206, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

TSL 3

Gene SNED1, Length 664 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-206ENST00000420591 ASPRV1Q53RT3 343 aa23.23■■□□□ 1.31
SNED1-206ENST00000420591 CXCL17Q6UXB2 119 aa23.23■■□□□ 1.31
SNED1-206ENST00000420591 SLC30A10Q6XR72 485 aa23.23■■□□□ 1.31
SNED1-206ENST00000420591 CENPQQ7L2Z9 268 aaPredicted RBP23.23■■□□□ 1.31
SNED1-206ENST00000420591 MORC4Q8TE76 937 aa23.23■■□□□ 1.31
SNED1-206ENST00000420591 MTMR10Q9NXD2 777 aa23.23■■□□□ 1.31
SNED1-206ENST00000420591 TNKSO95271 1327 aa23.23■■□□□ 1.31
SNED1-206ENST00000420591 RAD50Q92878 1312 aa23.23■■□□□ 1.31
SNED1-206ENST00000420591 CTAGE5O15320 804 aa23.22■■□□□ 1.31
SNED1-206ENST00000420591 TIMP1P01033 207 aa23.22■■□□□ 1.31
SNED1-206ENST00000420591 PARP1P09874 1014 aaKnown RBP23.22■■□□□ 1.31
SNED1-206ENST00000420591 GSPT1P15170 499 aaKnown RBP23.22■■□□□ 1.31
SNED1-206ENST00000420591 CDK7P50613 346 aa23.22■■□□□ 1.31
SNED1-206ENST00000420591 RPS6P62753 249 aaKnown RBP23.22■■□□□ 1.31
SNED1-206ENST00000420591 PDE4DQ08499 809 aa23.22■■□□□ 1.31
SNED1-206ENST00000420591 FAM109BQ6ICB4 259 aaPredicted RBP23.22■■□□□ 1.31
SNED1-206ENST00000420591 ENAHQ8N8S7 591 aaPredicted RBP23.22■■□□□ 1.31
SNED1-206ENST00000420591 LTBP2Q14767 1821 aa23.22■■□□□ 1.31
SNED1-206ENST00000420591 CDC37Q16543 378 aaPredicted RBP23.21■■□□□ 1.31
SNED1-206ENST00000420591 IFIT1BQ5T764 474 aaKnown RBP23.21■■□□□ 1.31
SNED1-206ENST00000420591 ZNF697Q5TEC3 545 aa23.21■■□□□ 1.31
SNED1-206ENST00000420591 DNERQ8NFT8 737 aa23.21■■□□□ 1.31
SNED1-206ENST00000420591 RNPC3Q96LT9 517 aaKnown RBP23.21■■□□□ 1.31
SNED1-206ENST00000420591 WDR11Q9BZH6 1224 aa23.21■■□□□ 1.31
SNED1-206ENST00000420591 CPVLQ9H3G5 476 aa23.21■■□□□ 1.31
SNED1-206ENST00000420591 ABCB11O95342 1321 aa23.2■■□□□ 1.3
SNED1-206ENST00000420591 DUSP28Q4G0W2 176 aa23.2■■□□□ 1.3
SNED1-206ENST00000420591 ADGRF4Q8IZF3 695 aa23.2■■□□□ 1.3
SNED1-206ENST00000420591 SLC17A8Q8NDX2 589 aa23.2■■□□□ 1.3
SNED1-206ENST00000420591 CCDC136Q96JN2 1154 aa23.2■■□□□ 1.3
SNED1-206ENST00000420591 SEZ6LQ9BYH1 1024 aa23.2■■□□□ 1.3
SNED1-206ENST00000420591 TBX21Q9UL17 535 aa23.2■■□□□ 1.3
SNED1-206ENST00000420591 STXBP5LQ9Y2K9 1186 aa23.2■■□□□ 1.3
SNED1-206ENST00000420591 U3KPZ7 1027 aaPredicted RBP23.2■■□□□ 1.3
SNED1-206ENST00000420591 ITGA7Q13683 1181 aa23.19■■□□□ 1.3
SNED1-206ENST00000420591 BRDTQ58F21 947 aaPredicted RBP23.19■■□□□ 1.3
SNED1-206ENST00000420591 MCF2L2Q86YR7 1114 aa23.19■■□□□ 1.3
SNED1-206ENST00000420591 RGS22Q8NE09 1264 aa23.19■■□□□ 1.3
SNED1-206ENST00000420591 IL25Q9H293 177 aa23.19■■□□□ 1.3
SNED1-206ENST00000420591 VAT1LQ9HCJ6 419 aa23.19■■□□□ 1.3
SNED1-206ENST00000420591 CHMLP26374 656 aa23.18■■□□□ 1.3
SNED1-206ENST00000420591 SMAD3P84022 425 aaKnown RBP23.18■■□□□ 1.3
SNED1-206ENST00000420591 PPIGQ13427 754 aaKnown RBP eCLIP23.18■■□□□ 1.3
SNED1-206ENST00000420591 MFSD5Q6N075 450 aa23.18■■□□□ 1.3
SNED1-206ENST00000420591 FAM126BQ8IXS8 530 aa23.18■■□□□ 1.3
SNED1-206ENST00000420591 TMEM199Q8N511 208 aa23.18■■□□□ 1.3
SNED1-206ENST00000420591 FAM161BQ96MY7 647 aa23.18■■□□□ 1.3
SNED1-206ENST00000420591 MAF1Q9H063 256 aa23.18■■□□□ 1.3
SNED1-206ENST00000420591 GPHNQ9NQX3 736 aaPredicted RBP23.18■■□□□ 1.3
SNED1-206ENST00000420591 ERICH2A1L162 156 aa23.17■■□□□ 1.3
SNED1-206ENST00000420591 PTGS1P23219 599 aa23.17■■□□□ 1.3
SNED1-206ENST00000420591 CPT1AP50416 773 aa23.17■■□□□ 1.3
SNED1-206ENST00000420591 PPP2R5BQ15173 497 aa23.17■■□□□ 1.3
SNED1-206ENST00000420591 RALYLQ86SE5 291 aaKnown RBP23.17■■□□□ 1.3
SNED1-206ENST00000420591 FBXO11Q86XK2 927 aa23.17■■□□□ 1.3
SNED1-206ENST00000420591 SCFD2Q8WU76 684 aa23.17■■□□□ 1.3
SNED1-206ENST00000420591 PPP1R12CQ9BZL4 782 aa23.17■■□□□ 1.3
SNED1-206ENST00000420591 POLR3EQ9NVU0 708 aa23.17■■□□□ 1.3
SNED1-206ENST00000420591 MRPL11Q9Y3B7 192 aaKnown RBP23.17■■□□□ 1.3
SNED1-206ENST00000420591 LAMA4Q16363 1823 aa23.17■■□□□ 1.3
SNED1-206ENST00000420591 NKRFO15226 690 aaKnown RBP eCLIP23.16■■□□□ 1.3
SNED1-206ENST00000420591 EPHB4P54760 987 aa23.16■■□□□ 1.3
SNED1-206ENST00000420591 QRICH1Q2TAL8 776 aa23.16■■□□□ 1.3
SNED1-206ENST00000420591 TMEM63BQ5T3F8 832 aa23.16■■□□□ 1.3
SNED1-206ENST00000420591 OR6J1Q8NGC5 347 aa23.16■■□□□ 1.3
SNED1-206ENST00000420591 RBM47A0AV96 593 aaKnown RBP23.15■■□□□ 1.3
SNED1-206ENST00000420591 SLC43A3Q8NBI5 491 aa23.15■■□□□ 1.3
SNED1-206ENST00000420591 IFIT3O14879 490 aaKnown RBP23.14■■□□□ 1.29
SNED1-206ENST00000420591 MYL3P08590 195 aa23.14■■□□□ 1.29
SNED1-206ENST00000420591 EDNRBP24530 442 aa23.14■■□□□ 1.29
SNED1-206ENST00000420591 SART3Q15020 963 aaKnown RBP23.14■■□□□ 1.29
SNED1-206ENST00000420591 CYB5R4Q7L1T6 521 aa23.14■■□□□ 1.29
SNED1-206ENST00000420591 NSUN6Q8TEA1 469 aaKnown RBP23.14■■□□□ 1.29
SNED1-206ENST00000420591 HIPK3Q9H422 1215 aa23.14■■□□□ 1.29
SNED1-206ENST00000420591 JMJD4Q9H9V9 463 aa23.14■■□□□ 1.29
SNED1-206ENST00000420591 KLRF2D3W0D1 207 aa23.13■■□□□ 1.29
SNED1-206ENST00000420591 CD4P01730 458 aa23.13■■□□□ 1.29
SNED1-206ENST00000420591 CYP21A2P08686 494 aa23.13■■□□□ 1.29
SNED1-206ENST00000420591 TXNP10599 105 aaKnown RBP23.13■■□□□ 1.29
SNED1-206ENST00000420591 PSMC6P62333 389 aa23.13■■□□□ 1.29
SNED1-206ENST00000420591 PTH1RQ03431 593 aa23.13■■□□□ 1.29
SNED1-206ENST00000420591 TTLL4Q14679 1199 aa23.13■■□□□ 1.29
SNED1-206ENST00000420591 NCOA7Q8NI08 942 aa23.13■■□□□ 1.29
SNED1-206ENST00000420591 AMNQ9BXJ7 453 aa23.13■■□□□ 1.29
SNED1-206ENST00000420591 HSFX4A0A1B0GTS1 333 aaPredicted RBP23.12■■□□□ 1.29
SNED1-206ENST00000420591 HSFX3A0A1B0GWH4 333 aaPredicted RBP23.12■■□□□ 1.29
SNED1-206ENST00000420591 LRRC37A2A6NM11 1700 aa23.12■■□□□ 1.29
SNED1-206ENST00000420591 CSF2RAP15509 400 aa23.12■■□□□ 1.29
SNED1-206ENST00000420591 SEC23AQ15436 765 aa23.12■■□□□ 1.29
SNED1-206ENST00000420591 STAG2Q8N3U4 1231 aa23.12■■□□□ 1.29
SNED1-206ENST00000420591 SYTL5Q8TDW5 730 aaPredicted RBP23.12■■□□□ 1.29
SNED1-206ENST00000420591 TBC1D5Q92609 795 aa23.12■■□□□ 1.29
SNED1-206ENST00000420591 RMDN3Q96TC7 470 aa23.12■■□□□ 1.29
SNED1-206ENST00000420591 BUD13Q9BRD0 619 aaKnown RBP eCLIP23.12■■□□□ 1.29
SNED1-206ENST00000420591 SGSM2O43147 1006 aa23.11■■□□□ 1.29
SNED1-206ENST00000420591 KPNA6O60684 536 aa23.11■■□□□ 1.29
SNED1-206ENST00000420591 SUPT20HL2P0C7V6 817 aa23.11■■□□□ 1.29
SNED1-206ENST00000420591 CYP2C18P33260 490 aa23.11■■□□□ 1.29
SNED1-206ENST00000420591 TRAF1Q13077 416 aa23.11■■□□□ 1.29
SNED1-206ENST00000420591 STXBP2Q15833 593 aa23.11■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms