RNA–Protein interactions for RNA: ENST00000420482.5

PTPN4-202, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 568 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-202ENST00000420482 SHHQ15465 462 aa24.94■■□□□ 1.58
PTPN4-202ENST00000420482 ENAHQ8N8S7 591 aaPredicted RBP24.94■■□□□ 1.58
PTPN4-202ENST00000420482 DNERQ8NFT8 737 aa24.94■■□□□ 1.58
PTPN4-202ENST00000420482 ASTN1O14525 1302 aa24.93■■□□□ 1.58
PTPN4-202ENST00000420482 DHX16O60231 1041 aaKnown RBP24.93■■□□□ 1.58
PTPN4-202ENST00000420482 GSPT1P15170 499 aaKnown RBP24.93■■□□□ 1.58
PTPN4-202ENST00000420482 SMPD1P17405 629 aa24.93■■□□□ 1.58
PTPN4-202ENST00000420482 PDE4DQ08499 809 aa24.93■■□□□ 1.58
PTPN4-202ENST00000420482 IFIT1BQ5T764 474 aaKnown RBP24.93■■□□□ 1.58
PTPN4-202ENST00000420482 TAPT1Q6NXT6 567 aa24.93■■□□□ 1.58
PTPN4-202ENST00000420482 RGS22Q8NE09 1264 aa24.93■■□□□ 1.58
PTPN4-202ENST00000420482 CLEC4DQ8WXI8 215 aa24.93■■□□□ 1.58
PTPN4-202ENST00000420482 U3KPZ7 1027 aaPredicted RBP24.93■■□□□ 1.58
PTPN4-202ENST00000420482 LRRC37A2A6NM11 1700 aa24.92■■□□□ 1.58
PTPN4-202ENST00000420482 CDK7P50613 346 aa24.92■■□□□ 1.58
PTPN4-202ENST00000420482 RPS6P62753 249 aaKnown RBP24.92■■□□□ 1.58
PTPN4-202ENST00000420482 IRX6P78412 446 aaPredicted RBP24.92■■□□□ 1.58
PTPN4-202ENST00000420482 BEX3Q00994 111 aa24.92■■□□□ 1.58
PTPN4-202ENST00000420482 USH1GQ495M9 461 aa24.92■■□□□ 1.58
PTPN4-202ENST00000420482 BRDTQ58F21 947 aaPredicted RBP24.92■■□□□ 1.58
PTPN4-202ENST00000420482 GUCD1Q96NT3 240 aa24.92■■□□□ 1.58
PTPN4-202ENST00000420482 UBA5Q9GZZ9 404 aa24.92■■□□□ 1.58
PTPN4-202ENST00000420482 PDGFCQ9NRA1 345 aa24.92■■□□□ 1.58
PTPN4-202ENST00000420482 ABCB11O95342 1321 aa24.91■■□□□ 1.58
PTPN4-202ENST00000420482 TIMP1P01033 207 aa24.91■■□□□ 1.58
PTPN4-202ENST00000420482 CDC37Q16543 378 aaPredicted RBP24.91■■□□□ 1.58
PTPN4-202ENST00000420482 DUSP28Q4G0W2 176 aa24.91■■□□□ 1.58
PTPN4-202ENST00000420482 SLC30A10Q6XR72 485 aa24.91■■□□□ 1.58
PTPN4-202ENST00000420482 MCF2L2Q86YR7 1114 aa24.91■■□□□ 1.58
PTPN4-202ENST00000420482 PURBQ96QR8 312 aaKnown RBP24.91■■□□□ 1.58
PTPN4-202ENST00000420482 WDR11Q9BZH6 1224 aa24.91■■□□□ 1.58
PTPN4-202ENST00000420482 ERICH2A1L162 156 aa24.9■■□□□ 1.58
PTPN4-202ENST00000420482 CTAGE5O15320 804 aa24.9■■□□□ 1.58
PTPN4-202ENST00000420482 IRX5P78411 483 aaPredicted RBP24.9■■□□□ 1.58
PTPN4-202ENST00000420482 C9orf50Q5SZB4 431 aa24.9■■□□□ 1.58
PTPN4-202ENST00000420482 ZNF697Q5TEC3 545 aa24.9■■□□□ 1.58
PTPN4-202ENST00000420482 CXCL17Q6UXB2 119 aa24.9■■□□□ 1.58
PTPN4-202ENST00000420482 ADGRF4Q8IZF3 695 aa24.9■■□□□ 1.58
PTPN4-202ENST00000420482 UNC80Q8N2C7 3258 aa24.9■■□□□ 1.58
PTPN4-202ENST00000420482 NKRFO15226 690 aaKnown RBP eCLIP24.89■■□□□ 1.58
PTPN4-202ENST00000420482 ITGB8P26012 769 aa24.89■■□□□ 1.58
PTPN4-202ENST00000420482 CHMLP26374 656 aa24.89■■□□□ 1.58
PTPN4-202ENST00000420482 CPT1AP50416 773 aa24.89■■□□□ 1.58
PTPN4-202ENST00000420482 MFSD5Q6N075 450 aa24.89■■□□□ 1.58
PTPN4-202ENST00000420482 RALYLQ86SE5 291 aaKnown RBP24.89■■□□□ 1.58
PTPN4-202ENST00000420482 TMEM199Q8N511 208 aa24.89■■□□□ 1.58
PTPN4-202ENST00000420482 RNPC3Q96LT9 517 aaKnown RBP24.89■■□□□ 1.58
PTPN4-202ENST00000420482 POLR3EQ9NVU0 708 aa24.89■■□□□ 1.58
PTPN4-202ENST00000420482 TBX21Q9UL17 535 aa24.89■■□□□ 1.58
PTPN4-202ENST00000420482 MRPL11Q9Y3B7 192 aaKnown RBP24.89■■□□□ 1.58
PTPN4-202ENST00000420482 SMAD3P84022 425 aaKnown RBP24.88■■□□□ 1.57
PTPN4-202ENST00000420482 PPIGQ13427 754 aaKnown RBP eCLIP24.88■■□□□ 1.571e-6■□□□□ 8.2
PTPN4-202ENST00000420482 ITGA7Q13683 1181 aa24.88■■□□□ 1.57
PTPN4-202ENST00000420482 SART3Q15020 963 aaKnown RBP24.88■■□□□ 1.57
PTPN4-202ENST00000420482 FBXO11Q86XK2 927 aa24.88■■□□□ 1.57
PTPN4-202ENST00000420482 FAM126BQ8IXS8 530 aa24.88■■□□□ 1.57
PTPN4-202ENST00000420482 SCFD2Q8WU76 684 aa24.88■■□□□ 1.57
PTPN4-202ENST00000420482 GPHNQ9NQX3 736 aaPredicted RBP24.88■■□□□ 1.57
PTPN4-202ENST00000420482 DDX49Q9Y6V7 483 aaKnown RBP24.88■■□□□ 1.57
PTPN4-202ENST00000420482 LCTP09848 1927 aa24.88■■□□□ 1.57
PTPN4-202ENST00000420482 TRAF1Q13077 416 aa24.87■■□□□ 1.57
PTPN4-202ENST00000420482 PPP2R5BQ15173 497 aa24.87■■□□□ 1.57
PTPN4-202ENST00000420482 CPVLQ9H3G5 476 aa24.87■■□□□ 1.57
PTPN4-202ENST00000420482 RBM47A0AV96 593 aaKnown RBP24.86■■□□□ 1.57
PTPN4-202ENST00000420482 IL25Q9H293 177 aa24.86■■□□□ 1.57
PTPN4-202ENST00000420482 VAT1LQ9HCJ6 419 aa24.86■■□□□ 1.57
PTPN4-202ENST00000420482 EDNRBP24530 442 aa24.85■■□□□ 1.57
PTPN4-202ENST00000420482 QRICH1Q2TAL8 776 aa24.85■■□□□ 1.57
PTPN4-202ENST00000420482 SLC43A3Q8NBI5 491 aa24.85■■□□□ 1.57
PTPN4-202ENST00000420482 OR6J1Q8NGC5 347 aa24.85■■□□□ 1.57
PTPN4-202ENST00000420482 NCOA7Q8NI08 942 aa24.85■■□□□ 1.57
PTPN4-202ENST00000420482 NSUN6Q8TEA1 469 aaKnown RBP24.85■■□□□ 1.57
PTPN4-202ENST00000420482 FAM161BQ96MY7 647 aa24.85■■□□□ 1.57
PTPN4-202ENST00000420482 CYP21A2P08686 494 aa24.84■■□□□ 1.57
PTPN4-202ENST00000420482 TTLL4Q14679 1199 aa24.84■■□□□ 1.57
PTPN4-202ENST00000420482 AMNQ9BXJ7 453 aa24.84■■□□□ 1.57
PTPN4-202ENST00000420482 JMJD4Q9H9V9 463 aa24.84■■□□□ 1.57
PTPN4-202ENST00000420482 KLRF2D3W0D1 207 aa24.83■■□□□ 1.57
PTPN4-202ENST00000420482 IFIT3O14879 490 aaKnown RBP24.83■■□□□ 1.57
PTPN4-202ENST00000420482 SGSM2O43147 1006 aa24.83■■□□□ 1.57
PTPN4-202ENST00000420482 KPNA6O60684 536 aa24.83■■□□□ 1.57
PTPN4-202ENST00000420482 CD4P01730 458 aa24.83■■□□□ 1.57
PTPN4-202ENST00000420482 SEC23AQ15436 765 aa24.83■■□□□ 1.57
PTPN4-202ENST00000420482 CYB5R4Q7L1T6 521 aa24.83■■□□□ 1.57
PTPN4-202ENST00000420482 IWS1Q96ST2 819 aa24.83■■□□□ 1.57
PTPN4-202ENST00000420482 PPP1R12CQ9BZL4 782 aa24.83■■□□□ 1.57
PTPN4-202ENST00000420482 TXNP10599 105 aaKnown RBP24.82■■□□□ 1.56
PTPN4-202ENST00000420482 PTH1RQ03431 593 aa24.82■■□□□ 1.56
PTPN4-202ENST00000420482 STXBP2Q15833 593 aa24.82■■□□□ 1.56
PTPN4-202ENST00000420482 PSRC1Q6PGN9 363 aaPredicted RBP24.82■■□□□ 1.56
PTPN4-202ENST00000420482 PHF6Q8IWS0 365 aaKnown RBP eCLIP24.82■■□□□ 1.56
PTPN4-202ENST00000420482 HIPK3Q9H422 1215 aa24.82■■□□□ 1.56
PTPN4-202ENST00000420482 MAP3K20Q9NYL2 800 aaKnown RBP24.82■■□□□ 1.56
PTPN4-202ENST00000420482 MYL3P08590 195 aa24.81■■□□□ 1.56
PTPN4-202ENST00000420482 SUPT20HL2P0C7V6 817 aa24.81■■□□□ 1.56
PTPN4-202ENST00000420482 EPHB4P54760 987 aa24.81■■□□□ 1.56
PTPN4-202ENST00000420482 WTAPQ15007 396 aa24.81■■□□□ 1.56
PTPN4-202ENST00000420482 ARHGEF16Q5VV41 709 aa24.81■■□□□ 1.56
PTPN4-202ENST00000420482 SYTL5Q8TDW5 730 aaPredicted RBP24.81■■□□□ 1.56
PTPN4-202ENST00000420482 RMDN3Q96TC7 470 aa24.81■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms