RNA–Protein interactions for RNA: ENST00000420101.6

SEMA4D-204, Transcript of semaphorin 4D, humanhuman

TSL 1 (best) BASIC

Gene SEMA4D, Length 1,837 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-204ENST00000420101 GPCPD1Q9NPB8 672 aa16.6■□□□□ 0.25
SEMA4D-204ENST00000420101 HERC5Q9UII4 1024 aaKnown RBP16.6■□□□□ 0.25
SEMA4D-204ENST00000420101 CNOT7Q9UIV1 285 aaKnown RBP16.6■□□□□ 0.25
SEMA4D-204ENST00000420101 L1RE1Q9UN81 338 aa16.6■□□□□ 0.25
SEMA4D-204ENST00000420101 H3BQF6 201 aa16.59■□□□□ 0.25
SEMA4D-204ENST00000420101 FZD9O00144 591 aa16.59■□□□□ 0.25
SEMA4D-204ENST00000420101 PPFIA4O75335 1185 aa16.59■□□□□ 0.25
SEMA4D-204ENST00000420101 NOVP48745 357 aa16.59■□□□□ 0.25
SEMA4D-204ENST00000420101 ICA1Q05084 483 aa16.59■□□□□ 0.25
SEMA4D-204ENST00000420101 SEPT2Q15019 361 aa16.59■□□□□ 0.25
SEMA4D-204ENST00000420101 ASPRV1Q53RT3 343 aa16.59■□□□□ 0.25
SEMA4D-204ENST00000420101 VPS18Q9P253 973 aa16.59■□□□□ 0.25
SEMA4D-204ENST00000420101 CDC23Q9UJX2 597 aa16.59■□□□□ 0.25
SEMA4D-204ENST00000420101 A0A1B0GVL5 298 aa16.59■□□□□ 0.25
SEMA4D-204ENST00000420101 CUTAO60888 179 aa16.59■□□□□ 0.25
SEMA4D-204ENST00000420101 GH2P01242 217 aa16.59■□□□□ 0.25
SEMA4D-204ENST00000420101 EEF2P13639 858 aaKnown RBP16.59■□□□□ 0.25
SEMA4D-204ENST00000420101 PRELPP51888 382 aa16.59■□□□□ 0.25
SEMA4D-204ENST00000420101 SHROOM1Q2M3G4 852 aaPredicted RBP16.59■□□□□ 0.25
SEMA4D-204ENST00000420101 TBC1D10BQ4KMP7 808 aaPredicted RBP16.59■□□□□ 0.25
SEMA4D-204ENST00000420101 CT47A1Q5JQC4 288 aaPredicted RBP16.59■□□□□ 0.25
SEMA4D-204ENST00000420101 DACH1Q9UI36 760 aa16.59■□□□□ 0.25
SEMA4D-204ENST00000420101 HOOK1Q9UJC3 728 aaKnown RBP16.59■□□□□ 0.25
SEMA4D-204ENST00000420101 FANCGO15287 622 aa16.58■□□□□ 0.24
SEMA4D-204ENST00000420101 CCDC175P0C221 793 aa16.58■□□□□ 0.24
SEMA4D-204ENST00000420101 CALML3P27482 149 aa16.58■□□□□ 0.24
SEMA4D-204ENST00000420101 LMOD1P29536 600 aaPredicted RBP16.58■□□□□ 0.24
SEMA4D-204ENST00000420101 RILPL1Q5EBL4 403 aa16.58■□□□□ 0.24
SEMA4D-204ENST00000420101 FKBP1CQ5VVH2 108 aa16.58■□□□□ 0.24
SEMA4D-204ENST00000420101 MMS22LQ6ZRQ5 1243 aa16.58■□□□□ 0.24
SEMA4D-204ENST00000420101 MIGA2Q7L4E1 593 aa16.58■□□□□ 0.24
SEMA4D-204ENST00000420101 SAMD7Q7Z3H4 446 aa16.58■□□□□ 0.24
SEMA4D-204ENST00000420101 CCDC148Q8NFR7 591 aa16.58■□□□□ 0.24
SEMA4D-204ENST00000420101 SPZ1Q9BXG8 430 aa16.58■□□□□ 0.24
SEMA4D-204ENST00000420101 HSD3B7Q9H2F3 369 aa16.58■□□□□ 0.24
SEMA4D-204ENST00000420101 SCAF8Q9UPN6 1271 aaKnown RBP16.58■□□□□ 0.24
SEMA4D-204ENST00000420101 H7C1D1 291 aa16.57■□□□□ 0.24
SEMA4D-204ENST00000420101 CYTH3O43739 400 aa16.57■□□□□ 0.24
SEMA4D-204ENST00000420101 PPP6R2O75170 966 aa16.57■□□□□ 0.24
SEMA4D-204ENST00000420101 MARCKSP29966 332 aaPredicted RBP16.57■□□□□ 0.24
SEMA4D-204ENST00000420101 ZNF280AP59817 542 aaPredicted RBP16.57■□□□□ 0.24
SEMA4D-204ENST00000420101 TNFAIP1Q13829 316 aa16.57■□□□□ 0.24
SEMA4D-204ENST00000420101 DNAJC21Q5F1R6 531 aaKnown RBP16.57■□□□□ 0.24
SEMA4D-204ENST00000420101 FAM83AQ86UY5 434 aa16.57■□□□□ 0.24
SEMA4D-204ENST00000420101 DPF2Q92785 391 aa16.57■□□□□ 0.24
SEMA4D-204ENST00000420101 PANX2Q96RD6 677 aa16.57■□□□□ 0.24
SEMA4D-204ENST00000420101 PDE11AQ9HCR9 933 aa16.57■□□□□ 0.24
SEMA4D-204ENST00000420101 NYAP2Q9P242 653 aa16.57■□□□□ 0.24
SEMA4D-204ENST00000420101 MYO1AQ9UBC5 1043 aa16.57■□□□□ 0.24
SEMA4D-204ENST00000420101 ZNF541Q9H0D2 1346 aa16.57■□□□□ 0.24
SEMA4D-204ENST00000420101 CNTNAP1P78357 1384 aa16.57■□□□□ 0.24
SEMA4D-204ENST00000420101 COL2A1P02458 1487 aaPredicted RBP16.57■□□□□ 0.24
SEMA4D-204ENST00000420101 MYH8P13535 1937 aa16.57■□□□□ 0.24
SEMA4D-204ENST00000420101 VEGFAP15692 232 aaPredicted RBP16.56■□□□□ 0.24
SEMA4D-204ENST00000420101 LMNB1P20700 586 aa16.56■□□□□ 0.24
SEMA4D-204ENST00000420101 WHAMMP3Q1A5X7 153 aa16.56■□□□□ 0.24
SEMA4D-204ENST00000420101 SPECC1LQ69YQ0 1117 aa16.56■□□□□ 0.24
SEMA4D-204ENST00000420101 METTL16Q86W50 562 aaKnown RBP16.56■□□□□ 0.24
SEMA4D-204ENST00000420101 SHISA4Q96DD7 197 aa16.56■□□□□ 0.24
SEMA4D-204ENST00000420101 SH3GLB2Q9NR46 395 aa16.56■□□□□ 0.24
SEMA4D-204ENST00000420101 CLGNO14967 610 aa16.56■□□□□ 0.24
SEMA4D-204ENST00000420101 KIF5CO60282 957 aa16.56■□□□□ 0.24
SEMA4D-204ENST00000420101 SLC1A4P43007 532 aa16.56■□□□□ 0.24
SEMA4D-204ENST00000420101 AARSP49588 968 aaKnown RBP eCLIP16.56■□□□□ 0.24
SEMA4D-204ENST00000420101 NAPAP54920 295 aa16.56■□□□□ 0.24
SEMA4D-204ENST00000420101 MAPK8IP2Q13387 824 aaPredicted RBP16.56■□□□□ 0.24
SEMA4D-204ENST00000420101 SLC39A14Q15043 492 aa16.56■□□□□ 0.24
SEMA4D-204ENST00000420101 KIF4BQ2VIQ3 1234 aa16.56■□□□□ 0.24
SEMA4D-204ENST00000420101 GPATCH4Q5T3I0 446 aaKnown RBP16.56■□□□□ 0.24
SEMA4D-204ENST00000420101 WWC2Q6AWC2 1192 aa16.56■□□□□ 0.24
SEMA4D-204ENST00000420101 MCTP2Q6DN12 878 aa16.56■□□□□ 0.24
SEMA4D-204ENST00000420101 KCTD1Q719H9 257 aa16.56■□□□□ 0.24
SEMA4D-204ENST00000420101 CCDC12Q8WUD4 166 aaPredicted RBP16.56■□□□□ 0.24
SEMA4D-204ENST00000420101 ZBED3Q96IU2 234 aaPredicted RBP16.56■□□□□ 0.24
SEMA4D-204ENST00000420101 WDR24Q96S15 920 aa16.56■□□□□ 0.24
SEMA4D-204ENST00000420101 PIGSQ96S52 555 aa16.56■□□□□ 0.24
SEMA4D-204ENST00000420101 A6NNZ2 444 aa16.55■□□□□ 0.24
SEMA4D-204ENST00000420101 EGFRP00533 1210 aa16.55■□□□□ 0.24
SEMA4D-204ENST00000420101 SMARCA1P28370 1054 aa16.55■□□□□ 0.24
SEMA4D-204ENST00000420101 ZNF543Q08ER8 600 aa16.55■□□□□ 0.24
SEMA4D-204ENST00000420101 RASA3Q14644 834 aa16.55■□□□□ 0.24
SEMA4D-204ENST00000420101 SLC35G1Q2M3R5 365 aa16.55■□□□□ 0.24
SEMA4D-204ENST00000420101 TUBB8Q3ZCM7 444 aa16.55■□□□□ 0.24
SEMA4D-204ENST00000420101 SLFN13Q68D06 897 aa16.55■□□□□ 0.24
SEMA4D-204ENST00000420101 WDR93Q6P2C0 686 aa16.55■□□□□ 0.24
SEMA4D-204ENST00000420101 PACS2Q86VP3 889 aa16.55■□□□□ 0.24
SEMA4D-204ENST00000420101 BLIDQ8IZY5 108 aa16.55■□□□□ 0.24
SEMA4D-204ENST00000420101 DHX58Q96C10 678 aa16.55■□□□□ 0.24
SEMA4D-204ENST00000420101 ANKZF1Q9H8Y5 726 aa16.55■□□□□ 0.24
SEMA4D-204ENST00000420101 CEP131Q9UPN4 1083 aa16.55■□□□□ 0.24
SEMA4D-204ENST00000420101 GSCP56915 257 aaPredicted RBP16.54■□□□□ 0.24
SEMA4D-204ENST00000420101 IKQ13123 557 aaPredicted RBP16.54■□□□□ 0.24
SEMA4D-204ENST00000420101 MAP9Q49MG5 647 aa16.54■□□□□ 0.24
SEMA4D-204ENST00000420101 PIK3AP1Q6ZUJ8 805 aa16.54■□□□□ 0.24
SEMA4D-204ENST00000420101 CDAN1Q8IWY9 1227 aa16.54■□□□□ 0.24
SEMA4D-204ENST00000420101 ARHGEF10LQ9HCE6 1279 aa16.54■□□□□ 0.24
SEMA4D-204ENST00000420101 BARHL2Q9NY43 387 aa16.54■□□□□ 0.24
SEMA4D-204ENST00000420101 HPSEQ9Y251 543 aa16.54■□□□□ 0.24
SEMA4D-204ENST00000420101 MYH6P13533 1939 aa16.54■□□□□ 0.24
SEMA4D-204ENST00000420101 SNHG28P0DPA3 235 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms