RNA–Protein interactions for RNA: ENST00000418436.5

RFC1-203, Transcript of replication factor C subunit 1, humanhuman

TSL 1 (best)

Gene RFC1, Length 1,255 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-203ENST00000418436 DDAH1O94760 285 aa12.25□□□□□ -0.45
RFC1-203ENST00000418436 CCL5P13501 91 aa12.25□□□□□ -0.45
RFC1-203ENST00000418436 RGS19P49795 217 aa12.25□□□□□ -0.45
RFC1-203ENST00000418436 PLCB2Q00722 1185 aa12.25□□□□□ -0.45
RFC1-203ENST00000418436 TRIM32Q13049 653 aa12.25□□□□□ -0.45
RFC1-203ENST00000418436 SLC35G1Q2M3R5 365 aa12.25□□□□□ -0.45
RFC1-203ENST00000418436 OLFML2BQ68BL8 750 aa12.25□□□□□ -0.45
RFC1-203ENST00000418436 FBXL16Q8N461 479 aa12.25□□□□□ -0.45
RFC1-203ENST00000418436 MTMR8Q96EF0 704 aa12.25□□□□□ -0.45
RFC1-203ENST00000418436 TRERF1Q96PN7 1200 aa12.25□□□□□ -0.45
RFC1-203ENST00000418436 LRRC2Q9BYS8 371 aa12.25□□□□□ -0.45
RFC1-203ENST00000418436 ACAD9Q9H845 621 aa12.25□□□□□ -0.45
RFC1-203ENST00000418436 JMJD4Q9H9V9 463 aa12.25□□□□□ -0.45
RFC1-203ENST00000418436 RNF146Q9NTX7 359 aa12.25□□□□□ -0.45
RFC1-203ENST00000418436 SLC5A4Q9NY91 659 aa12.25□□□□□ -0.45
RFC1-203ENST00000418436 BIN2Q9UBW5 565 aaPredicted RBP12.25□□□□□ -0.45
RFC1-203ENST00000418436 CCPG1Q9ULG6 757 aa12.25□□□□□ -0.45
RFC1-203ENST00000418436 LCTP09848 1927 aa12.25□□□□□ -0.45
RFC1-203ENST00000418436 CCDC69A6NI79 296 aa12.24□□□□□ -0.45
RFC1-203ENST00000418436 EIF5BO60841 1220 aaKnown RBP12.24□□□□□ -0.45
RFC1-203ENST00000418436 PGK2P07205 417 aa12.24□□□□□ -0.45
RFC1-203ENST00000418436 ALAS1P13196 640 aa12.24□□□□□ -0.45
RFC1-203ENST00000418436 SLC4A3P48751 1232 aa12.24□□□□□ -0.45
RFC1-203ENST00000418436 SOX10P56693 466 aa12.24□□□□□ -0.45
RFC1-203ENST00000418436 CDC37Q16543 378 aaPredicted RBP12.24□□□□□ -0.45
RFC1-203ENST00000418436 RPTORQ8N122 1335 aa12.24□□□□□ -0.45
RFC1-203ENST00000418436 MAML3Q96JK9 1138 aa12.24□□□□□ -0.45
RFC1-203ENST00000418436 JAKMIP1Q96N16 626 aaKnown RBP12.24□□□□□ -0.45
RFC1-203ENST00000418436 ZBED2Q9BTP6 218 aa12.24□□□□□ -0.45
RFC1-203ENST00000418436 UNC93B1Q9H1C4 597 aa12.24□□□□□ -0.45
RFC1-203ENST00000418436 RIOX1Q9H6W3 641 aa12.24□□□□□ -0.45
RFC1-203ENST00000418436 PAK6Q9NQU5 681 aaPredicted RBP12.24□□□□□ -0.45
RFC1-203ENST00000418436 CYTH3O43739 400 aa12.23□□□□□ -0.45
RFC1-203ENST00000418436 GJB1P08034 283 aa12.23□□□□□ -0.45
RFC1-203ENST00000418436 CALM1P0DP23 149 aa12.23□□□□□ -0.45
RFC1-203ENST00000418436 CALM2P0DP24 149 aa12.23□□□□□ -0.45
RFC1-203ENST00000418436 CALM3P0DP25 149 aa12.23□□□□□ -0.45
RFC1-203ENST00000418436 CPA1P15085 419 aa12.23□□□□□ -0.45
RFC1-203ENST00000418436 TAL1P17542 331 aaPredicted RBP12.23□□□□□ -0.45
RFC1-203ENST00000418436 RPS6KB1P23443 525 aa12.23□□□□□ -0.45
RFC1-203ENST00000418436 PSMA5P28066 241 aa12.23□□□□□ -0.45
RFC1-203ENST00000418436 SMARCA1P28370 1054 aa12.23□□□□□ -0.45
RFC1-203ENST00000418436 CACNB2Q08289 660 aaPredicted RBP12.23□□□□□ -0.45
RFC1-203ENST00000418436 QRICH1Q2TAL8 776 aa12.23□□□□□ -0.45
RFC1-203ENST00000418436 MUM1L1Q5H9M0 696 aa12.23□□□□□ -0.45
RFC1-203ENST00000418436 BLOC1S2Q6QNY1 142 aa12.23□□□□□ -0.45
RFC1-203ENST00000418436 NFXL1Q6ZNB6 911 aa12.23□□□□□ -0.45
RFC1-203ENST00000418436 ANKRD35Q8N283 1001 aa12.23□□□□□ -0.45
RFC1-203ENST00000418436 NUP133Q8WUM0 1156 aa12.23□□□□□ -0.45
RFC1-203ENST00000418436 CLEC4DQ8WXI8 215 aa12.23□□□□□ -0.45
RFC1-203ENST00000418436 DDX11Q96FC9 970 aa12.23□□□□□ -0.45
RFC1-203ENST00000418436 TCEANC2Q96MN5 208 aa12.23□□□□□ -0.45
RFC1-203ENST00000418436 MYL10Q9BUA6 226 aa12.23□□□□□ -0.45
RFC1-203ENST00000418436 AGXT2Q9BYV1 514 aa12.23□□□□□ -0.45
RFC1-203ENST00000418436 TM6SF1Q9BZW5 370 aa12.23□□□□□ -0.45
RFC1-203ENST00000418436 RNF208Q9H0X6 261 aa12.23□□□□□ -0.45
RFC1-203ENST00000418436 HMX1Q9NP08 348 aaPredicted RBP12.23□□□□□ -0.45
RFC1-203ENST00000418436 A1CFQ9NQ94 594 aaKnown RBP12.23□□□□□ -0.45
RFC1-203ENST00000418436 HOMER2Q9NSB8 354 aa12.23□□□□□ -0.45
RFC1-203ENST00000418436 SLC12A7Q9Y666 1083 aa12.23□□□□□ -0.45
RFC1-203ENST00000418436 BRCA2P51587 3418 aa12.23□□□□□ -0.45
RFC1-203ENST00000418436 KIAA0100Q14667 2235 aaKnown RBP12.23□□□□□ -0.45
RFC1-203ENST00000418436 BAZ2BQ9UIF8 2168 aaKnown RBP12.23□□□□□ -0.45
RFC1-203ENST00000418436 PFASO15067 1338 aa12.22□□□□□ -0.45
RFC1-203ENST00000418436 PPP1R3GB7ZBB8 358 aa12.22□□□□□ -0.45
RFC1-203ENST00000418436 MYCP01106 439 aaPredicted RBP12.22□□□□□ -0.45
RFC1-203ENST00000418436 KIF5BP33176 963 aa12.22□□□□□ -0.45
RFC1-203ENST00000418436 CYP2C19P33261 490 aa12.22□□□□□ -0.45
RFC1-203ENST00000418436 MFSD14CQ5VZR4 134 aa12.22□□□□□ -0.45
RFC1-203ENST00000418436 APOA5Q6Q788 366 aa12.22□□□□□ -0.45
RFC1-203ENST00000418436 MAMDC4Q6UXC1 1216 aa12.22□□□□□ -0.45
RFC1-203ENST00000418436 MSL3Q8N5Y2 521 aaKnown RBP12.22□□□□□ -0.45
RFC1-203ENST00000418436 FAM133AQ8N9E0 248 aa12.22□□□□□ -0.45
RFC1-203ENST00000418436 CTCFLQ8NI51 663 aaPredicted RBP12.22□□□□□ -0.45
RFC1-203ENST00000418436 DDX12PQ92771 950 aa12.22□□□□□ -0.45
RFC1-203ENST00000418436 IL17RAQ96F46 866 aa12.22□□□□□ -0.45
RFC1-203ENST00000418436 FGD4Q96M96 766 aa12.22□□□□□ -0.45
RFC1-203ENST00000418436 LZTS2Q9BRK4 669 aa12.22□□□□□ -0.45
RFC1-203ENST00000418436 MAF1Q9H063 256 aa12.22□□□□□ -0.45
RFC1-203ENST00000418436 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.22□□□□□ -0.45
RFC1-203ENST00000418436 VAT1LQ9HCJ6 419 aa12.22□□□□□ -0.45
RFC1-203ENST00000418436 BRPF3Q9ULD4 1205 aa12.22□□□□□ -0.45
RFC1-203ENST00000418436 FRMPD3Q5JV73 1810 aa12.22□□□□□ -0.45
RFC1-203ENST00000418436 MCM3APO60318 1980 aa12.21□□□□□ -0.45
RFC1-203ENST00000418436 ABCB11O95342 1321 aa12.21□□□□□ -0.45
RFC1-203ENST00000418436 NFIBO00712 420 aa12.21□□□□□ -0.45
RFC1-203ENST00000418436 ZBTB5O15062 677 aa12.21□□□□□ -0.45
RFC1-203ENST00000418436 DHX16O60231 1041 aaKnown RBP12.21□□□□□ -0.45
RFC1-203ENST00000418436 SGPL1O95470 568 aa12.21□□□□□ -0.45
RFC1-203ENST00000418436 CAPN2P17655 700 aa12.21□□□□□ -0.45
RFC1-203ENST00000418436 CASTP20810 708 aaKnown RBP12.21□□□□□ -0.45
RFC1-203ENST00000418436 GJA8P48165 433 aa12.21□□□□□ -0.45
RFC1-203ENST00000418436 GNAQP50148 359 aa12.21□□□□□ -0.45
RFC1-203ENST00000418436 RCAN1P53805 252 aa12.21□□□□□ -0.45
RFC1-203ENST00000418436 ANAPC15P60006 121 aa12.21□□□□□ -0.45
RFC1-203ENST00000418436 C8orf34Q49A92 452 aa12.21□□□□□ -0.45
RFC1-203ENST00000418436 Q6ZUG5 572 aa12.21□□□□□ -0.45
RFC1-203ENST00000418436 RUFY3Q7L099 469 aa12.21□□□□□ -0.45
RFC1-203ENST00000418436 FBXO11Q86XK2 927 aa12.21□□□□□ -0.45
RFC1-203ENST00000418436 FANCBQ8NB91 859 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms