RNA–Protein interactions for RNA: ENST00000418336.6

PKNOX1-202, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 2

Gene PKNOX1, Length 459 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-202ENST00000418336 PCDH10Q9P2E7 1040 aa24.01■■□□□ 1.43
PKNOX1-202ENST00000418336 PTPDC1A2A3K4 754 aa24■■□□□ 1.43
PKNOX1-202ENST00000418336 CST5P28325 142 aaPredicted RBP24■■□□□ 1.43
PKNOX1-202ENST00000418336 HSPA4P34932 840 aa24■■□□□ 1.43
PKNOX1-202ENST00000418336 CATIPQ7Z7H3 387 aa24■■□□□ 1.43
PKNOX1-202ENST00000418336 FBXO16Q8IX29 292 aaPredicted RBP24■■□□□ 1.43
PKNOX1-202ENST00000418336 SYTL5Q8TDW5 730 aaPredicted RBP24■■□□□ 1.43
PKNOX1-202ENST00000418336 PIGSQ96S52 555 aa24■■□□□ 1.43
PKNOX1-202ENST00000418336 LAMA3Q16787 3333 aa24■■□□□ 1.43
PKNOX1-202ENST00000418336 RBM47A0AV96 593 aaKnown RBP23.99■■□□□ 1.43
PKNOX1-202ENST00000418336 CALML3P27482 149 aa23.99■■□□□ 1.43
PKNOX1-202ENST00000418336 ADCYAP1R1P41586 468 aa23.99■■□□□ 1.43
PKNOX1-202ENST00000418336 GJA9P57773 515 aa23.99■■□□□ 1.43
PKNOX1-202ENST00000418336 C7orf61Q8IZ16 206 aa23.99■■□□□ 1.43
PKNOX1-202ENST00000418336 NEK1Q96PY6 1258 aa23.99■■□□□ 1.43
PKNOX1-202ENST00000418336 AMNQ9BXJ7 453 aa23.99■■□□□ 1.43
PKNOX1-202ENST00000418336 COLQQ9Y215 455 aaPredicted RBP23.99■■□□□ 1.43
PKNOX1-202ENST00000418336 SMPD1P17405 629 aa23.98■■□□□ 1.43
PKNOX1-202ENST00000418336 RNF20Q5VTR2 975 aa23.98■■□□□ 1.43
PKNOX1-202ENST00000418336 C1orf53Q5VUE5 145 aa23.98■■□□□ 1.43
PKNOX1-202ENST00000418336 SLC39A5Q6ZMH5 540 aa23.98■■□□□ 1.43
PKNOX1-202ENST00000418336 DNERQ8NFT8 737 aa23.98■■□□□ 1.43
PKNOX1-202ENST00000418336 TCEANC2Q96MN5 208 aa23.98■■□□□ 1.43
PKNOX1-202ENST00000418336 SPZ1Q9BXG8 430 aa23.98■■□□□ 1.43
PKNOX1-202ENST00000418336 VTA1Q9NP79 307 aa23.98■■□□□ 1.43
PKNOX1-202ENST00000418336 NR2E3Q9Y5X4 410 aa23.98■■□□□ 1.43
PKNOX1-202ENST00000418336 KBTBD13C9JR72 458 aa23.97■■□□□ 1.43
PKNOX1-202ENST00000418336 PLEKHA8P1O95397 391 aa23.97■■□□□ 1.43
PKNOX1-202ENST00000418336 HSD17B4P51659 736 aa23.97■■□□□ 1.43
PKNOX1-202ENST00000418336 EEPD1Q7L9B9 569 aa23.97■■□□□ 1.43
PKNOX1-202ENST00000418336 TMTC2Q8N394 836 aa23.97■■□□□ 1.43
PKNOX1-202ENST00000418336 SRBD1Q8N5C6 995 aaKnown RBP23.97■■□□□ 1.43
PKNOX1-202ENST00000418336 TAAR1Q96RJ0 339 aa23.97■■□□□ 1.43
PKNOX1-202ENST00000418336 ADD3Q9UEY8 706 aaKnown RBP23.97■■□□□ 1.43
PKNOX1-202ENST00000418336 SNX14Q9Y5W7 946 aa23.97■■□□□ 1.43
PKNOX1-202ENST00000418336 DHX16O60231 1041 aaKnown RBP23.96■■□□□ 1.43
PKNOX1-202ENST00000418336 SLC34A2O95436 690 aa23.96■■□□□ 1.43
PKNOX1-202ENST00000418336 RXRAP19793 462 aa23.96■■□□□ 1.43
PKNOX1-202ENST00000418336 SMARCA1P28370 1054 aa23.96■■□□□ 1.43
PKNOX1-202ENST00000418336 ATN1P54259 1190 aaPredicted RBP23.96■■□□□ 1.43
PKNOX1-202ENST00000418336 DHX32Q7L7V1 743 aaKnown RBP23.96■■□□□ 1.43
PKNOX1-202ENST00000418336 RNF180Q86T96 592 aa23.96■■□□□ 1.43
PKNOX1-202ENST00000418336 NUP133Q8WUM0 1156 aa23.96■■□□□ 1.43
PKNOX1-202ENST00000418336 TSEN34Q9BSV6 310 aaKnown RBP23.96■■□□□ 1.43
PKNOX1-202ENST00000418336 BRPF3Q9ULD4 1205 aa23.96■■□□□ 1.43
PKNOX1-202ENST00000418336 MRPL11Q9Y3B7 192 aaKnown RBP23.96■■□□□ 1.43
PKNOX1-202ENST00000418336 PNMA6FA0A0J9YX94 578 aa23.95■■□□□ 1.42
PKNOX1-202ENST00000418336 A0A1W2PQ45 241 aaPredicted RBP23.95■■□□□ 1.42
PKNOX1-202ENST00000418336 A0A1W2PQY0 241 aa23.95■■□□□ 1.42
PKNOX1-202ENST00000418336 TNFAIP2Q03169 654 aa23.95■■□□□ 1.42
PKNOX1-202ENST00000418336 KCNA10Q16322 511 aa23.95■■□□□ 1.42
PKNOX1-202ENST00000418336 FERMT2Q96AC1 680 aa23.95■■□□□ 1.42
PKNOX1-202ENST00000418336 PCDHA1Q9Y5I3 950 aa23.95■■□□□ 1.42
PKNOX1-202ENST00000418336 CPA1P15085 419 aa23.94■■□□□ 1.42
PKNOX1-202ENST00000418336 ACLYP53396 1101 aa23.94■■□□□ 1.42
PKNOX1-202ENST00000418336 RTP1P59025 263 aa23.94■■□□□ 1.42
PKNOX1-202ENST00000418336 IQSEC1Q6DN90 963 aa23.94■■□□□ 1.42
PKNOX1-202ENST00000418336 CHRDL2Q6WN34 429 aa23.94■■□□□ 1.42
PKNOX1-202ENST00000418336 HOMER1Q86YM7 354 aa23.94■■□□□ 1.42
PKNOX1-202ENST00000418336 RAB11FIP4Q86YS3 637 aa23.94■■□□□ 1.42
PKNOX1-202ENST00000418336 GDF15Q99988 308 aa23.94■■□□□ 1.42
PKNOX1-202ENST00000418336 ZMYND8Q9ULU4 1186 aaPredicted RBP23.94■■□□□ 1.42
PKNOX1-202ENST00000418336 LTBP2Q14767 1821 aa23.94■■□□□ 1.42
PKNOX1-202ENST00000418336 EPB41L2O43491 1005 aaKnown RBP23.93■■□□□ 1.42
PKNOX1-202ENST00000418336 FUT2Q10981 343 aa23.93■■□□□ 1.42
PKNOX1-202ENST00000418336 KRT32Q14532 448 aa23.93■■□□□ 1.42
PKNOX1-202ENST00000418336 HABP4Q5JVS0 413 aaKnown RBP23.93■■□□□ 1.42
PKNOX1-202ENST00000418336 APOA5Q6Q788 366 aa23.93■■□□□ 1.42
PKNOX1-202ENST00000418336 MCF2L2Q86YR7 1114 aa23.93■■□□□ 1.42
PKNOX1-202ENST00000418336 RBM27Q9P2N5 1060 aaKnown RBP23.93■■□□□ 1.42
PKNOX1-202ENST00000418336 Q9Y3F1 56 aa23.93■■□□□ 1.42
PKNOX1-202ENST00000418336 MOXD2PA6NHM9 499 aa23.92■■□□□ 1.42
PKNOX1-202ENST00000418336 CCDC69A6NI79 296 aa23.92■■□□□ 1.42
PKNOX1-202ENST00000418336 MYCNP04198 464 aaPredicted RBP23.92■■□□□ 1.42
PKNOX1-202ENST00000418336 SYN1P17600 705 aa23.92■■□□□ 1.42
PKNOX1-202ENST00000418336 TRIM60Q495X7 471 aa23.92■■□□□ 1.42
PKNOX1-202ENST00000418336 DUSP28Q4G0W2 176 aa23.92■■□□□ 1.42
PKNOX1-202ENST00000418336 TMTC3Q6ZXV5 915 aa23.92■■□□□ 1.42
PKNOX1-202ENST00000418336 TLK2Q86UE8 772 aa23.92■■□□□ 1.42
PKNOX1-202ENST00000418336 CMTR1Q8N1G2 835 aaKnown RBP23.92■■□□□ 1.42
PKNOX1-202ENST00000418336 FANCBQ8NB91 859 aa23.92■■□□□ 1.42
PKNOX1-202ENST00000418336 CTCFLQ8NI51 663 aaPredicted RBP23.92■■□□□ 1.42
PKNOX1-202ENST00000418336 USP26Q9BXU7 913 aa23.92■■□□□ 1.42
PKNOX1-202ENST00000418336 FAM217BQ9NTX9 383 aaPredicted RBP23.92■■□□□ 1.42
PKNOX1-202ENST00000418336 SLC12A7Q9Y666 1083 aa23.92■■□□□ 1.42
PKNOX1-202ENST00000418336 TRIOBPQ9H2D6 2365 aa23.92■■□□□ 1.42
PKNOX1-202ENST00000418336 SZT2Q5T011 3432 aa23.91■■□□□ 1.42
PKNOX1-202ENST00000418336 ARIH2O95376 493 aa23.91■■□□□ 1.42
PKNOX1-202ENST00000418336 C6orf222P0C671 652 aaPredicted RBP23.91■■□□□ 1.42
PKNOX1-202ENST00000418336 CALM1P0DP23 149 aa23.91■■□□□ 1.42
PKNOX1-202ENST00000418336 CALM2P0DP24 149 aa23.91■■□□□ 1.42
PKNOX1-202ENST00000418336 CALM3P0DP25 149 aa23.91■■□□□ 1.42
PKNOX1-202ENST00000418336 KIF5BP33176 963 aa23.91■■□□□ 1.42
PKNOX1-202ENST00000418336 NFXL1Q6ZNB6 911 aa23.91■■□□□ 1.42
PKNOX1-202ENST00000418336 FBXL16Q8N461 479 aa23.91■■□□□ 1.42
PKNOX1-202ENST00000418336 SAMD3Q8N6K7 520 aa23.91■■□□□ 1.42
PKNOX1-202ENST00000418336 AGXT2Q9BYV1 514 aa23.91■■□□□ 1.42
PKNOX1-202ENST00000418336 KIAA1217Q5T5P2 1943 aa23.9■■□□□ 1.42
PKNOX1-202ENST00000418336 REC8O95072 547 aa23.9■■□□□ 1.42
PKNOX1-202ENST00000418336 CFBP00751 764 aa23.9■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms