RNA–Protein interactions for RNA: ENST00000417628.6

ECHDC1-206, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-206ENST00000417628 IRX2Q9BZI1 471 aaPredicted RBP6.86□□□□□ -1.31
ECHDC1-206ENST00000417628 ATP13A2Q9NQ11 1180 aa6.86□□□□□ -1.31
ECHDC1-206ENST00000417628 PRDM4Q9UKN5 801 aa6.86□□□□□ -1.31
ECHDC1-206ENST00000417628 HCN2Q9UL51 889 aa6.86□□□□□ -1.31
ECHDC1-206ENST00000417628 C5orf42Q9H799 3197 aa6.85□□□□□ -1.31
ECHDC1-206ENST00000417628 ST8SIA5O15466 376 aa6.85□□□□□ -1.31
ECHDC1-206ENST00000417628 POLR3DP05423 398 aaPredicted RBP6.85□□□□□ -1.31
ECHDC1-206ENST00000417628 ZKSCAN1P17029 563 aaPredicted RBP6.85□□□□□ -1.31
ECHDC1-206ENST00000417628 POU3F3P20264 500 aaPredicted RBP6.85□□□□□ -1.31
ECHDC1-206ENST00000417628 TNNI2P48788 182 aa6.85□□□□□ -1.31
ECHDC1-206ENST00000417628 CACNB2Q08289 660 aaPredicted RBP6.85□□□□□ -1.31
ECHDC1-206ENST00000417628 RAD51AP2Q09MP3 1159 aa6.85□□□□□ -1.31
ECHDC1-206ENST00000417628 SFSWAPQ12872 951 aaKnown RBP6.85□□□□□ -1.31
ECHDC1-206ENST00000417628 CNGB1Q14028 1251 aaPredicted RBP6.85□□□□□ -1.31
ECHDC1-206ENST00000417628 SNX17Q15036 470 aa6.85□□□□□ -1.31
ECHDC1-206ENST00000417628 PKN1Q16512 942 aa6.85□□□□□ -1.31
ECHDC1-206ENST00000417628 FAM110CQ1W6H9 321 aa6.85□□□□□ -1.31
ECHDC1-206ENST00000417628 ANKRD13CQ8N6S4 541 aa6.85□□□□□ -1.31
ECHDC1-206ENST00000417628 C1orf127Q8N9H9 656 aa6.85□□□□□ -1.31
ECHDC1-206ENST00000417628 TMEM39BQ9GZU3 492 aa6.85□□□□□ -1.31
ECHDC1-206ENST00000417628 AAASQ9NRG9 546 aa6.85□□□□□ -1.31
ECHDC1-206ENST00000417628 BSDC1Q9NW68 430 aaPredicted RBP6.85□□□□□ -1.31
ECHDC1-206ENST00000417628 SLC45A1Q9Y2W3 748 aa6.85□□□□□ -1.31
ECHDC1-206ENST00000417628 MTCH2Q9Y6C9 303 aa6.85□□□□□ -1.31
ECHDC1-206ENST00000417628 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.85□□□□□ -1.31
ECHDC1-206ENST00000417628 XIRP2A4UGR9 3374 aa6.85□□□□□ -1.31
ECHDC1-206ENST00000417628 PLXNA1Q9UIW2 1896 aa6.84□□□□□ -1.31
ECHDC1-206ENST00000417628 SLC35F4A4IF30 521 aa6.84□□□□□ -1.31
ECHDC1-206ENST00000417628 EREGO14944 169 aa6.84□□□□□ -1.31
ECHDC1-206ENST00000417628 EFSO43281 561 aa6.84□□□□□ -1.31
ECHDC1-206ENST00000417628 MAN1A2O60476 641 aa6.84□□□□□ -1.31
ECHDC1-206ENST00000417628 CLTBP09497 229 aa6.84□□□□□ -1.31
ECHDC1-206ENST00000417628 FAM157BP0CG42 384 aa6.84□□□□□ -1.31
ECHDC1-206ENST00000417628 RAG1P15918 1043 aa6.84□□□□□ -1.31
ECHDC1-206ENST00000417628 ERCC5P28715 1186 aaPredicted RBP6.84□□□□□ -1.31
ECHDC1-206ENST00000417628 RBM5P52756 815 aaKnown RBP eCLIP6.84□□□□□ -1.31
ECHDC1-206ENST00000417628 LBRQ14739 615 aaKnown RBP6.84□□□□□ -1.31
ECHDC1-206ENST00000417628 LAPTM4AQ15012 233 aa6.84□□□□□ -1.31
ECHDC1-206ENST00000417628 EFHC2Q5JST6 749 aa6.84□□□□□ -1.31
ECHDC1-206ENST00000417628 CCDC174Q6PII3 467 aa6.84□□□□□ -1.31
ECHDC1-206ENST00000417628 SUGP1Q8IWZ8 645 aaKnown RBP6.84□□□□□ -1.31
ECHDC1-206ENST00000417628 GALNT12Q8IXK2 581 aa6.84□□□□□ -1.31
ECHDC1-206ENST00000417628 RMDN1Q96DB5 314 aa6.84□□□□□ -1.31
ECHDC1-206ENST00000417628 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.84□□□□□ -1.31
ECHDC1-206ENST00000417628 ZNF70Q9UC06 446 aaPredicted RBP6.84□□□□□ -1.31
ECHDC1-206ENST00000417628 GJD2Q9UKL4 321 aa6.84□□□□□ -1.31
ECHDC1-206ENST00000417628 TACC3Q9Y6A5 838 aa6.84□□□□□ -1.31
ECHDC1-206ENST00000417628 FRMPD3Q5JV73 1810 aa6.84□□□□□ -1.31
ECHDC1-206ENST00000417628 SPTBN4Q9H254 2564 aa6.83□□□□□ -1.32
ECHDC1-206ENST00000417628 GAKO14976 1311 aa6.83□□□□□ -1.32
ECHDC1-206ENST00000417628 WDFY4Q6ZS81 3184 aa6.83□□□□□ -1.32
ECHDC1-206ENST00000417628 TCP10L2B9ZVM9 353 aa6.83□□□□□ -1.32
ECHDC1-206ENST00000417628 F8W031 263 aaPredicted RBP6.83□□□□□ -1.32
ECHDC1-206ENST00000417628 ATXN7O15265 892 aaPredicted RBP6.83□□□□□ -1.32
ECHDC1-206ENST00000417628 MSCO60682 206 aa6.83□□□□□ -1.32
ECHDC1-206ENST00000417628 SASH3O75995 380 aa6.83□□□□□ -1.32
ECHDC1-206ENST00000417628 CYP2B6P20813 491 aa6.83□□□□□ -1.32
ECHDC1-206ENST00000417628 EIF4BP23588 611 aaKnown RBP6.83□□□□□ -1.32
ECHDC1-206ENST00000417628 ANP32AP39687 249 aaKnown RBP6.83□□□□□ -1.32
ECHDC1-206ENST00000417628 PTSQ03393 145 aa6.83□□□□□ -1.32
ECHDC1-206ENST00000417628 RASIP1Q5U651 963 aa6.83□□□□□ -1.32
ECHDC1-206ENST00000417628 FASTKD5Q7L8L6 764 aaKnown RBP6.83□□□□□ -1.32
ECHDC1-206ENST00000417628 NT5DC4Q86YG4 428 aa6.83□□□□□ -1.32
ECHDC1-206ENST00000417628 FTSJ3Q8IY81 847 aaKnown RBP6.83□□□□□ -1.32
ECHDC1-206ENST00000417628 CERS5Q8N5B7 392 aa6.83□□□□□ -1.32
ECHDC1-206ENST00000417628 SOCS4Q8WXH5 440 aa6.83□□□□□ -1.32
ECHDC1-206ENST00000417628 LPAR1Q92633 364 aa6.83□□□□□ -1.32
ECHDC1-206ENST00000417628 ANP32BQ92688 251 aaKnown RBP6.83□□□□□ -1.32
ECHDC1-206ENST00000417628 HOOK2Q96ED9 719 aa6.83□□□□□ -1.32
ECHDC1-206ENST00000417628 CRELD1Q96HD1 420 aa6.83□□□□□ -1.32
ECHDC1-206ENST00000417628 GSX2Q9BZM3 304 aa6.83□□□□□ -1.32
ECHDC1-206ENST00000417628 C12orf49Q9H741 205 aa6.83□□□□□ -1.32
ECHDC1-206ENST00000417628 NPHS2Q9NP85 383 aa6.83□□□□□ -1.32
ECHDC1-206ENST00000417628 METTL5Q9NRN9 209 aaKnown RBP6.83□□□□□ -1.32
ECHDC1-206ENST00000417628 CUEDC1Q9NWM3 386 aaPredicted RBP6.83□□□□□ -1.32
ECHDC1-206ENST00000417628 ABI2Q9NYB9 513 aaPredicted RBP6.83□□□□□ -1.32
ECHDC1-206ENST00000417628 YBX2Q9Y2T7 364 aaKnown RBP6.83□□□□□ -1.32
ECHDC1-206ENST00000417628 PCDHGC4Q9Y5F7 938 aa6.83□□□□□ -1.32
ECHDC1-206ENST00000417628 PLXNA3P51805 1871 aa6.83□□□□□ -1.32
ECHDC1-206ENST00000417628 KBTBD13C9JR72 458 aa6.82□□□□□ -1.32
ECHDC1-206ENST00000417628 CXCL11O14625 94 aa6.82□□□□□ -1.32
ECHDC1-206ENST00000417628 KIAA0355O15063 1070 aa6.82□□□□□ -1.32
ECHDC1-206ENST00000417628 CYP2E1P05181 493 aaPredicted RBP6.82□□□□□ -1.32
ECHDC1-206ENST00000417628 XRCC5P13010 732 aaKnown RBP6.82□□□□□ -1.32
ECHDC1-206ENST00000417628 TARSP26639 723 aaKnown RBP6.82□□□□□ -1.32
ECHDC1-206ENST00000417628 TNP2Q05952 138 aa6.82□□□□□ -1.32
ECHDC1-206ENST00000417628 DCAF15Q66K64 600 aa6.82□□□□□ -1.32
ECHDC1-206ENST00000417628 RIPOR1Q6ZS17 1223 aa6.82□□□□□ -1.32
ECHDC1-206ENST00000417628 BMP8AQ7Z5Y6 402 aa6.82□□□□□ -1.32
ECHDC1-206ENST00000417628 ADSSL1Q8N142 457 aa6.82□□□□□ -1.32
ECHDC1-206ENST00000417628 RNF34Q969K3 372 aa6.82□□□□□ -1.32
ECHDC1-206ENST00000417628 FSD1Q9BTV5 496 aa6.82□□□□□ -1.32
ECHDC1-206ENST00000417628 SEC31BQ9NQW1 1179 aa6.82□□□□□ -1.32
ECHDC1-206ENST00000417628 SH2B1Q9NRF2 756 aaPredicted RBP6.82□□□□□ -1.32
ECHDC1-206ENST00000417628 NDFIP2Q9NV92 336 aa6.82□□□□□ -1.32
ECHDC1-206ENST00000417628 DDX20Q9UHI6 824 aaKnown RBP6.82□□□□□ -1.32
ECHDC1-206ENST00000417628 DAGLAQ9Y4D2 1042 aa6.82□□□□□ -1.32
ECHDC1-206ENST00000417628 ZNF521Q96K83 1311 aa6.81□□□□□ -1.32
ECHDC1-206ENST00000417628 A0A0G2JLL6 359 aaPredicted RBP6.81□□□□□ -1.32
ECHDC1-206ENST00000417628 GIPC1O14908 333 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms