RNA–Protein interactions for RNA: ENST00000417540.5

HDLBP-206, Transcript of high density lipoprotein binding protein, humanhuman

TSL 4

Gene HDLBP, Length 525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-206ENST00000417540 FDX1P10109 184 aa11.92□□□□□ -0.5
HDLBP-206ENST00000417540 RARBP10826 455 aa11.92□□□□□ -0.5
HDLBP-206ENST00000417540 BEX3Q00994 111 aa11.92□□□□□ -0.5
HDLBP-206ENST00000417540 KIAA1211Q6ZU35 1233 aa11.92□□□□□ -0.5
HDLBP-206ENST00000417540 COPS5Q92905 334 aa11.92□□□□□ -0.5
HDLBP-206ENST00000417540 MTMR8Q96EF0 704 aa11.92□□□□□ -0.5
HDLBP-206ENST00000417540 PRO3102Q9H379 93 aa11.92□□□□□ -0.5
HDLBP-206ENST00000417540 RBM27Q9P2N5 1060 aaKnown RBP11.92□□□□□ -0.5
HDLBP-206ENST00000417540 SCN5AQ14524 2016 aa11.92□□□□□ -0.5
HDLBP-206ENST00000417540 ABCB11O95342 1321 aa11.91□□□□□ -0.5
HDLBP-206ENST00000417540 KBTBD13C9JR72 458 aa11.91□□□□□ -0.5
HDLBP-206ENST00000417540 MSCO60682 206 aa11.91□□□□□ -0.5
HDLBP-206ENST00000417540 SMPD1P17405 629 aa11.91□□□□□ -0.5
HDLBP-206ENST00000417540 HOXA13P31271 388 aaPredicted RBP11.91□□□□□ -0.5
HDLBP-206ENST00000417540 TAPT1Q6NXT6 567 aa11.91□□□□□ -0.5
HDLBP-206ENST00000417540 RNF207Q6ZRF8 634 aa11.91□□□□□ -0.5
HDLBP-206ENST00000417540 TLK2Q86UE8 772 aa11.91□□□□□ -0.5
HDLBP-206ENST00000417540 SYTL5Q8TDW5 730 aaPredicted RBP11.91□□□□□ -0.5
HDLBP-206ENST00000417540 ZFP91Q96JP5 570 aaPredicted RBP11.91□□□□□ -0.5
HDLBP-206ENST00000417540 PPP4R2Q9NY27 417 aa11.91□□□□□ -0.5
HDLBP-206ENST00000417540 ATP11BQ9Y2G3 1177 aa11.91□□□□□ -0.5
HDLBP-206ENST00000417540 PRUNE2Q8WUY3 3088 aa11.91□□□□□ -0.5
HDLBP-206ENST00000417540 DDAH1O94760 285 aa11.9□□□□□ -0.5
HDLBP-206ENST00000417540 EIF2AK2P19525 551 aaKnown RBP11.9□□□□□ -0.5
HDLBP-206ENST00000417540 EDNRBP24530 442 aa11.9□□□□□ -0.5
HDLBP-206ENST00000417540 MAGEA10P43363 369 aaPredicted RBP11.9□□□□□ -0.5
HDLBP-206ENST00000417540 CCDC178Q5BJE1 867 aa11.9□□□□□ -0.5
HDLBP-206ENST00000417540 CCSAPQ6IQ19 270 aaPredicted RBP11.9□□□□□ -0.5
HDLBP-206ENST00000417540 CASC1Q6TDU7 716 aa11.9□□□□□ -0.5
HDLBP-206ENST00000417540 SH3RF1Q7Z6J0 888 aa11.9□□□□□ -0.5
HDLBP-206ENST00000417540 FBXO11Q86XK2 927 aa11.9□□□□□ -0.5
HDLBP-206ENST00000417540 UPF3AQ9H1J1 476 aaKnown RBP11.9□□□□□ -0.5
HDLBP-206ENST00000417540 PDLIM7Q9NR12 457 aa11.9□□□□□ -0.5
HDLBP-206ENST00000417540 NRBP1Q9UHY1 535 aa11.9□□□□□ -0.5
HDLBP-206ENST00000417540 BRPF3Q9ULD4 1205 aa11.9□□□□□ -0.5
HDLBP-206ENST00000417540 GNEQ9Y223 722 aaKnown RBP11.9□□□□□ -0.5
HDLBP-206ENST00000417540 SNX14Q9Y5W7 946 aa11.9□□□□□ -0.5
HDLBP-206ENST00000417540 SIP14410 1827 aa11.9□□□□□ -0.5
HDLBP-206ENST00000417540 CHD7Q9P2D1 2997 aa11.9□□□□□ -0.5
HDLBP-206ENST00000417540 PTPRSQ13332 1948 aa11.9□□□□□ -0.51
HDLBP-206ENST00000417540 REV3LO60673 3130 aa11.89□□□□□ -0.51
HDLBP-206ENST00000417540 ERICH2A1L162 156 aa11.89□□□□□ -0.51
HDLBP-206ENST00000417540 ZBTB5O15062 677 aa11.89□□□□□ -0.51
HDLBP-206ENST00000417540 SORBS3O60504 671 aa11.89□□□□□ -0.51
HDLBP-206ENST00000417540 PPFIA3O75145 1194 aa11.89□□□□□ -0.51
HDLBP-206ENST00000417540 CENPBP07199 599 aaPredicted RBP11.89□□□□□ -0.51
HDLBP-206ENST00000417540 C6orf222P0C671 652 aaPredicted RBP11.89□□□□□ -0.51
HDLBP-206ENST00000417540 MCM5P33992 734 aa11.89□□□□□ -0.51
HDLBP-206ENST00000417540 NT5C2P49902 561 aa11.89□□□□□ -0.51
HDLBP-206ENST00000417540 SNX17Q15036 470 aa11.89□□□□□ -0.51
HDLBP-206ENST00000417540 NFXL1Q6ZNB6 911 aa11.89□□□□□ -0.51
HDLBP-206ENST00000417540 CATIPQ7Z7H3 387 aa11.89□□□□□ -0.51
HDLBP-206ENST00000417540 SRBD1Q8N5C6 995 aaKnown RBP11.89□□□□□ -0.51
HDLBP-206ENST00000417540 MSL3Q8N5Y2 521 aaKnown RBP11.89□□□□□ -0.51
HDLBP-206ENST00000417540 KLHDC9Q8NEP7 349 aa11.89□□□□□ -0.51
HDLBP-206ENST00000417540 MORC4Q8TE76 937 aa11.89□□□□□ -0.51
HDLBP-206ENST00000417540 GPKOWQ92917 476 aaPredicted RBP eCLIP11.89□□□□□ -0.51
HDLBP-206ENST00000417540 JAKMIP1Q96N16 626 aaKnown RBP11.89□□□□□ -0.51
HDLBP-206ENST00000417540 TAAR1Q96RJ0 339 aa11.89□□□□□ -0.51
HDLBP-206ENST00000417540 ABHD16BQ9H3Z7 469 aa11.89□□□□□ -0.51
HDLBP-206ENST00000417540 PHF24Q9UPV7 400 aa11.89□□□□□ -0.51
HDLBP-206ENST00000417540 SPTBN5Q9NRC6 3674 aaKnown RBP11.89□□□□□ -0.51
HDLBP-206ENST00000417540 DLL1O00548 723 aa11.88□□□□□ -0.51
HDLBP-206ENST00000417540 SOX1O00570 391 aaPredicted RBP11.88□□□□□ -0.51
HDLBP-206ENST00000417540 PQBP1O60828 265 aaKnown RBP11.88□□□□□ -0.51
HDLBP-206ENST00000417540 DTNBO60941 627 aa11.88□□□□□ -0.51
HDLBP-206ENST00000417540 CFBP00751 764 aa11.88□□□□□ -0.51
HDLBP-206ENST00000417540 ITGB8P26012 769 aa11.88□□□□□ -0.51
HDLBP-206ENST00000417540 HSPA4P34932 840 aa11.88□□□□□ -0.51
HDLBP-206ENST00000417540 MDM2Q00987 491 aaPredicted RBP11.88□□□□□ -0.51
HDLBP-206ENST00000417540 SART3Q15020 963 aaKnown RBP11.88□□□□□ -0.51
HDLBP-206ENST00000417540 TYW1BQ6NUM6 668 aa11.88□□□□□ -0.51
HDLBP-206ENST00000417540 APOA5Q6Q788 366 aa11.88□□□□□ -0.51
HDLBP-206ENST00000417540 TMTC3Q6ZXV5 915 aa11.88□□□□□ -0.51
HDLBP-206ENST00000417540 NEK1Q96PY6 1258 aa11.88□□□□□ -0.51
HDLBP-206ENST00000417540 RIOX1Q9H6W3 641 aa11.88□□□□□ -0.51
HDLBP-206ENST00000417540 PRDM5Q9NQX1 630 aaPredicted RBP11.88□□□□□ -0.51
HDLBP-206ENST00000417540 FAM184BQ9ULE4 1060 aa11.88□□□□□ -0.51
HDLBP-206ENST00000417540 UNC80Q8N2C7 3258 aa11.88□□□□□ -0.51
HDLBP-206ENST00000417540 A0A0C4DFX4 3053 aa11.88□□□□□ -0.51
HDLBP-206ENST00000417540 CCDC69A6NI79 296 aa11.87□□□□□ -0.51
HDLBP-206ENST00000417540 ASB14A6NK59 587 aa11.87□□□□□ -0.51
HDLBP-206ENST00000417540 GOLGA8BA8MQT2 603 aa11.87□□□□□ -0.51
HDLBP-206ENST00000417540 ADAMTS3O15072 1205 aa11.87□□□□□ -0.51
HDLBP-206ENST00000417540 DUSP11O75319 330 aaKnown RBP11.87□□□□□ -0.51
HDLBP-206ENST00000417540 CST5P28325 142 aaPredicted RBP11.87□□□□□ -0.51
HDLBP-206ENST00000417540 HSD17B4P51659 736 aa11.87□□□□□ -0.51
HDLBP-206ENST00000417540 ACLYP53396 1101 aa11.87□□□□□ -0.51
HDLBP-206ENST00000417540 GJA9P57773 515 aa11.87□□□□□ -0.51
HDLBP-206ENST00000417540 PSMC6P62333 389 aa11.87□□□□□ -0.51
HDLBP-206ENST00000417540 EXOSC10Q01780 885 aaKnown RBP11.87□□□□□ -0.51
HDLBP-206ENST00000417540 APOBRQ0VD83 1088 aa11.87□□□□□ -0.51
HDLBP-206ENST00000417540 KCNA10Q16322 511 aa11.87□□□□□ -0.51
HDLBP-206ENST00000417540 UBE2SQ16763 222 aa11.87□□□□□ -0.51
HDLBP-206ENST00000417540 SLC39A5Q6ZMH5 540 aa11.87□□□□□ -0.51
HDLBP-206ENST00000417540 CCDC82Q8N4S0 544 aa11.87□□□□□ -0.51
HDLBP-206ENST00000417540 KCNB2Q92953 911 aa11.87□□□□□ -0.51
HDLBP-206ENST00000417540 TMEM87BQ96K49 555 aa11.87□□□□□ -0.51
HDLBP-206ENST00000417540 VTA1Q9NP79 307 aa11.87□□□□□ -0.51
HDLBP-206ENST00000417540 PXMP2Q9NR77 195 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms