RNA–Protein interactions for RNA: ENST00000417508.1

VPS16-204, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS16, Length 819 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-204ENST00000417508 GSPT1P15170 499 aaKnown RBP21.55■■□□□ 1.04
VPS16-204ENST00000417508 ITGB8P26012 769 aa21.55■■□□□ 1.04
VPS16-204ENST00000417508 FPGSQ05932 587 aa21.55■■□□□ 1.04
VPS16-204ENST00000417508 DUSP28Q4G0W2 176 aa21.55■■□□□ 1.04
VPS16-204ENST00000417508 EEPD1Q7L9B9 569 aa21.55■■□□□ 1.04
VPS16-204ENST00000417508 FBXO16Q8IX29 292 aaPredicted RBP21.55■■□□□ 1.04
VPS16-204ENST00000417508 UBA5Q9GZZ9 404 aa21.55■■□□□ 1.04
VPS16-204ENST00000417508 TBX21Q9UL17 535 aa21.55■■□□□ 1.04
VPS16-204ENST00000417508 TNKSO95271 1327 aa21.55■■□□□ 1.04
VPS16-204ENST00000417508 PARP1P09874 1014 aaKnown RBP21.54■■□□□ 1.04
VPS16-204ENST00000417508 CALML3P27482 149 aa21.54■■□□□ 1.04
VPS16-204ENST00000417508 RPS6P62753 249 aaKnown RBP21.54■■□□□ 1.04
VPS16-204ENST00000417508 BEX3Q00994 111 aa21.54■■□□□ 1.04
VPS16-204ENST00000417508 TRDNQ13061 729 aa21.54■■□□□ 1.04
VPS16-204ENST00000417508 C9orf50Q5SZB4 431 aa21.54■■□□□ 1.04
VPS16-204ENST00000417508 SLC43A3Q8NBI5 491 aa21.54■■□□□ 1.04
VPS16-204ENST00000417508 PURBQ96QR8 312 aaKnown RBP21.54■■□□□ 1.04
VPS16-204ENST00000417508 CHMLP26374 656 aa21.53■■□□□ 1.04
VPS16-204ENST00000417508 SMAD3P84022 425 aaKnown RBP21.53■■□□□ 1.04
VPS16-204ENST00000417508 Q7L0L9 218 aa21.53■■□□□ 1.04
VPS16-204ENST00000417508 ADGRF4Q8IZF3 695 aa21.53■■□□□ 1.04
VPS16-204ENST00000417508 WDR11Q9BZH6 1224 aa21.53■■□□□ 1.04
VPS16-204ENST00000417508 STXBP5LQ9Y2K9 1186 aa21.53■■□□□ 1.04
VPS16-204ENST00000417508 U3KPZ7 1027 aaPredicted RBP21.53■■□□□ 1.04
VPS16-204ENST00000417508 ABCB11O95342 1321 aa21.53■■□□□ 1.04
VPS16-204ENST00000417508 NKRFO15226 690 aaKnown RBP eCLIP21.52■■□□□ 1.04
VPS16-204ENST00000417508 PDE4DQ08499 809 aa21.52■■□□□ 1.04
VPS16-204ENST00000417508 CDC37Q16543 378 aaPredicted RBP21.52■■□□□ 1.04
VPS16-204ENST00000417508 IFIT1BQ5T764 474 aaKnown RBP21.52■■□□□ 1.04
VPS16-204ENST00000417508 MFSD5Q6N075 450 aa21.52■■□□□ 1.04
VPS16-204ENST00000417508 CXCL17Q6UXB2 119 aa21.52■■□□□ 1.04
VPS16-204ENST00000417508 SLC30A10Q6XR72 485 aa21.52■■□□□ 1.04
VPS16-204ENST00000417508 MCF2L2Q86YR7 1114 aa21.52■■□□□ 1.04
VPS16-204ENST00000417508 FAM126BQ8IXS8 530 aa21.52■■□□□ 1.04
VPS16-204ENST00000417508 IL25Q9H293 177 aa21.52■■□□□ 1.04
VPS16-204ENST00000417508 DDX49Q9Y6V7 483 aaKnown RBP21.52■■□□□ 1.04
VPS16-204ENST00000417508 CD4P01730 458 aa21.51■■□□□ 1.03
VPS16-204ENST00000417508 EDNRBP24530 442 aa21.51■■□□□ 1.03
VPS16-204ENST00000417508 ITGA7Q13683 1181 aa21.51■■□□□ 1.03
VPS16-204ENST00000417508 USH1GQ495M9 461 aa21.51■■□□□ 1.03
VPS16-204ENST00000417508 BRDTQ58F21 947 aaPredicted RBP21.51■■□□□ 1.03
VPS16-204ENST00000417508 POLR3EQ9NVU0 708 aa21.51■■□□□ 1.03
VPS16-204ENST00000417508 LRRC37A2A6NM11 1700 aa21.51■■□□□ 1.03
VPS16-204ENST00000417508 MYH6P13533 1939 aa21.51■■□□□ 1.03
VPS16-204ENST00000417508 PPIGQ13427 754 aaKnown RBP eCLIP21.5■■□□□ 1.031e-6■■□□□ 13.2
VPS16-204ENST00000417508 SEC23AQ15436 765 aa21.5■■□□□ 1.03
VPS16-204ENST00000417508 ZNF697Q5TEC3 545 aa21.5■■□□□ 1.03
VPS16-204ENST00000417508 TMEM199Q8N511 208 aa21.5■■□□□ 1.03
VPS16-204ENST00000417508 SCFD2Q8WU76 684 aa21.5■■□□□ 1.03
VPS16-204ENST00000417508 MRPL11Q9Y3B7 192 aaKnown RBP21.5■■□□□ 1.03
VPS16-204ENST00000417508 CPT1AP50416 773 aa21.49■■□□□ 1.03
VPS16-204ENST00000417508 FBXO11Q86XK2 927 aa21.49■■□□□ 1.03
VPS16-204ENST00000417508 RNPC3Q96LT9 517 aaKnown RBP21.49■■□□□ 1.03
VPS16-204ENST00000417508 CPVLQ9H3G5 476 aa21.49■■□□□ 1.03
VPS16-204ENST00000417508 JMJD4Q9H9V9 463 aa21.49■■□□□ 1.03
VPS16-204ENST00000417508 DHX16O60231 1041 aaKnown RBP21.48■■□□□ 1.03
VPS16-204ENST00000417508 KPNA6O60684 536 aa21.48■■□□□ 1.03
VPS16-204ENST00000417508 CYP21A2P08686 494 aa21.48■■□□□ 1.03
VPS16-204ENST00000417508 EPHB4P54760 987 aa21.48■■□□□ 1.03
VPS16-204ENST00000417508 IRX6P78412 446 aaPredicted RBP21.48■■□□□ 1.03
VPS16-204ENST00000417508 TRAF1Q13077 416 aa21.48■■□□□ 1.03
VPS16-204ENST00000417508 QRICH1Q2TAL8 776 aa21.48■■□□□ 1.03
VPS16-204ENST00000417508 SAMD3Q8N6K7 520 aa21.48■■□□□ 1.03
VPS16-204ENST00000417508 SLC17A8Q8NDX2 589 aa21.48■■□□□ 1.03
VPS16-204ENST00000417508 NSUN6Q8TEA1 469 aaKnown RBP21.48■■□□□ 1.03
VPS16-204ENST00000417508 IWS1Q96ST2 819 aa21.48■■□□□ 1.03
VPS16-204ENST00000417508 HSFX4A0A1B0GTS1 333 aaPredicted RBP21.47■■□□□ 1.03
VPS16-204ENST00000417508 HSFX3A0A1B0GWH4 333 aaPredicted RBP21.47■■□□□ 1.03
VPS16-204ENST00000417508 ERICH2A1L162 156 aa21.47■■□□□ 1.03
VPS16-204ENST00000417508 KLRF2D3W0D1 207 aa21.47■■□□□ 1.03
VPS16-204ENST00000417508 SGSM2O43147 1006 aa21.47■■□□□ 1.03
VPS16-204ENST00000417508 PTH1RQ03431 593 aa21.47■■□□□ 1.03
VPS16-204ENST00000417508 PPP2R5BQ15173 497 aa21.47■■□□□ 1.03
VPS16-204ENST00000417508 TMEM63BQ5T3F8 832 aa21.47■■□□□ 1.03
VPS16-204ENST00000417508 CYB5R4Q7L1T6 521 aa21.47■■□□□ 1.03
VPS16-204ENST00000417508 AMNQ9BXJ7 453 aa21.47■■□□□ 1.03
VPS16-204ENST00000417508 VAT1LQ9HCJ6 419 aa21.47■■□□□ 1.03
VPS16-204ENST00000417508 GPHNQ9NQX3 736 aaPredicted RBP21.47■■□□□ 1.03
VPS16-204ENST00000417508 MAP3K20Q9NYL2 800 aaKnown RBP21.47■■□□□ 1.03
VPS16-204ENST00000417508 GRIN2DO15399 1336 aa21.47■■□□□ 1.03
VPS16-204ENST00000417508 TMEM265A0A087WTH1 108 aa21.46■■□□□ 1.03
VPS16-204ENST00000417508 PALM3A6NDB9 673 aaPredicted RBP21.46■■□□□ 1.03
VPS16-204ENST00000417508 TTLL4Q14679 1199 aa21.46■■□□□ 1.03
VPS16-204ENST00000417508 SART3Q15020 963 aaKnown RBP21.46■■□□□ 1.03
VPS16-204ENST00000417508 OR6J1Q8NGC5 347 aa21.46■■□□□ 1.03
VPS16-204ENST00000417508 NCOA7Q8NI08 942 aa21.46■■□□□ 1.03
VPS16-204ENST00000417508 SYTL5Q8TDW5 730 aaPredicted RBP21.46■■□□□ 1.03
VPS16-204ENST00000417508 A6NJR5 290 aa21.45■■□□□ 1.02
VPS16-204ENST00000417508 IFIT3O14879 490 aaKnown RBP21.45■■□□□ 1.02
VPS16-204ENST00000417508 SUPT20HL2P0C7V6 817 aa21.45■■□□□ 1.02
VPS16-204ENST00000417508 TXNP10599 105 aaKnown RBP21.45■■□□□ 1.02
VPS16-204ENST00000417508 RALYLQ86SE5 291 aaKnown RBP21.45■■□□□ 1.02
VPS16-204ENST00000417508 STAG2Q8N3U4 1231 aa21.45■■□□□ 1.02
VPS16-204ENST00000417508 TBC1D5Q92609 795 aa21.45■■□□□ 1.02
VPS16-204ENST00000417508 MAP4K1Q92918 833 aa21.45■■□□□ 1.02
VPS16-204ENST00000417508 MTMR8Q96EF0 704 aa21.45■■□□□ 1.02
VPS16-204ENST00000417508 SEMA6BQ9H3T3 888 aa21.45■■□□□ 1.02
VPS16-204ENST00000417508 MAD2L2Q9UI95 211 aa21.45■■□□□ 1.02
VPS16-204ENST00000417508 E7EWF7 191 aa21.44■■□□□ 1.02
VPS16-204ENST00000417508 PTGS1P23219 599 aa21.44■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms